RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 SOX10P56693 466 aa10.31□□□□□ -0.76
CDK5RAP3-209ENST00000578663 DDX54Q8TDD1 881 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-209ENST00000578663 SYTL4Q96C24 671 aaPredicted RBP10.31□□□□□ -0.76
CDK5RAP3-209ENST00000578663 EDC4Q6P2E9 1401 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-209ENST00000578663 POTEIP0CG38 1075 aa10.3□□□□□ -0.76
CDK5RAP3-209ENST00000578663 POTEJP0CG39 1038 aa10.3□□□□□ -0.76
CDK5RAP3-209ENST00000578663 FXR1P51114 621 aaKnown RBP eCLIP10.3□□□□□ -0.76
CDK5RAP3-209ENST00000578663 MAP2K1Q02750 393 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-209ENST00000578663 GCC1Q96CN9 775 aa10.3□□□□□ -0.76
CDK5RAP3-209ENST00000578663 DCAF5Q96JK2 942 aa10.3□□□□□ -0.76
CDK5RAP3-209ENST00000578663 PITPNM2Q9BZ72 1349 aa10.3□□□□□ -0.76
CDK5RAP3-209ENST00000578663 ZC3H4Q9UPT8 1303 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-209ENST00000578663 CD163L1Q9NR16 1453 aa10.3□□□□□ -0.76
CDK5RAP3-209ENST00000578663 CHADLQ6NUI6 762 aa10.29□□□□□ -0.76
CDK5RAP3-209ENST00000578663 IP6K1Q92551 441 aa10.29□□□□□ -0.76
CDK5RAP3-209ENST00000578663 C4AP0C0L4 1744 aa10.29□□□□□ -0.76
CDK5RAP3-209ENST00000578663 CGNL1Q0VF96 1302 aa10.29□□□□□ -0.76
CDK5RAP3-209ENST00000578663 MEGF6O75095 1541 aa10.28□□□□□ -0.76
CDK5RAP3-209ENST00000578663 NME9Q86XW9 330 aa10.28□□□□□ -0.76
CDK5RAP3-209ENST00000578663 ZCRB1Q8TBF4 217 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-209ENST00000578663 TSKSQ9UJT2 592 aa10.28□□□□□ -0.76
CDK5RAP3-209ENST00000578663 RASSF10A6NK89 507 aa10.27□□□□□ -0.77
CDK5RAP3-209ENST00000578663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.27□□□□□ -0.77
CDK5RAP3-209ENST00000578663 WDR33Q9C0J8 1336 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-209ENST00000578663 COL6A3P12111 3177 aa10.26□□□□□ -0.77
CDK5RAP3-209ENST00000578663 MAP2P11137 1827 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-209ENST00000578663 TMEM88BA6NKF7 163 aa10.26□□□□□ -0.77
CDK5RAP3-209ENST00000578663 DGKZQ13574 1117 aa10.26□□□□□ -0.77
CDK5RAP3-209ENST00000578663 RTL1A6NKG5 1358 aa10.26□□□□□ -0.77
CDK5RAP3-209ENST00000578663 PALLDQ8WX93 1383 aa10.26□□□□□ -0.77
CDK5RAP3-209ENST00000578663 ADAMTSL1Q8N6G6 1762 aa10.25□□□□□ -0.77
CDK5RAP3-209ENST00000578663 PHF14O94880 888 aa10.25□□□□□ -0.77
CDK5RAP3-209ENST00000578663 MMP10P09238 476 aa10.25□□□□□ -0.77
CDK5RAP3-209ENST00000578663 RASSF7Q02833 373 aa10.25□□□□□ -0.77
CDK5RAP3-209ENST00000578663 HDGFL2Q7Z4V5 671 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-209ENST00000578663 ITGB4P16144 1822 aa10.24□□□□□ -0.77
CDK5RAP3-209ENST00000578663 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-209ENST00000578663 SSFA2P28290 1259 aa10.24□□□□□ -0.77
CDK5RAP3-209ENST00000578663 AK7Q96M32 723 aa10.24□□□□□ -0.77
CDK5RAP3-209ENST00000578663 ROCK2O75116 1388 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-209ENST00000578663 SCN4AP35499 1836 aa10.23□□□□□ -0.77
CDK5RAP3-209ENST00000578663 DEFB115Q30KQ5 88 aa10.23□□□□□ -0.77
CDK5RAP3-209ENST00000578663 SMARCC1Q92922 1105 aaPredicted RBP10.23□□□□□ -0.77
CDK5RAP3-209ENST00000578663 MAP3K19Q56UN5 1328 aa10.23□□□□□ -0.77
CDK5RAP3-209ENST00000578663 A0A1W2PP64 1363 aa10.23□□□□□ -0.77
CDK5RAP3-209ENST00000578663 RGPD2P0DJD1 1756 aa10.22□□□□□ -0.77
CDK5RAP3-209ENST00000578663 DLEC1Q9Y238 1755 aa10.22□□□□□ -0.77
CDK5RAP3-209ENST00000578663 ITGBL1O95965 494 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-209ENST00000578663 HOXC9P31274 260 aa10.22□□□□□ -0.77
CDK5RAP3-209ENST00000578663 LTV1Q96GA3 475 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-209ENST00000578663 TERF2IPQ9NYB0 399 aa10.22□□□□□ -0.77
CDK5RAP3-209ENST00000578663 ZNF219Q9P2Y4 722 aaPredicted RBP10.22□□□□□ -0.77
CDK5RAP3-209ENST00000578663 PCDH11XQ9BZA7 1347 aa10.22□□□□□ -0.77
CDK5RAP3-209ENST00000578663 PCDH11YQ9BZA8 1340 aa10.22□□□□□ -0.77
CDK5RAP3-209ENST00000578663 SLC17A8Q8NDX2 589 aa10.21□□□□□ -0.77
CDK5RAP3-209ENST00000578663 PUS7Q96PZ0 661 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-209ENST00000578663 PIM2Q9P1W9 311 aa10.21□□□□□ -0.77
CDK5RAP3-209ENST00000578663 SMG6Q86US8 1419 aaKnown RBP10.21□□□□□ -0.78
CDK5RAP3-209ENST00000578663 MKI67P46013 3256 aaKnown RBP10.21□□□□□ -0.78
CDK5RAP3-209ENST00000578663 TRPM7Q96QT4 1865 aa10.21□□□□□ -0.78
CDK5RAP3-209ENST00000578663 TRIOBPQ9H2D6 2365 aa10.21□□□□□ -0.78
CDK5RAP3-209ENST00000578663 DALRD3Q5D0E6 543 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-209ENST00000578663 RAPGEF4Q8WZA2 1011 aa10.2□□□□□ -0.78
CDK5RAP3-209ENST00000578663 L3MBTL2Q969R5 705 aa10.2□□□□□ -0.78
CDK5RAP3-209ENST00000578663 LMNB1P20700 586 aa10.19□□□□□ -0.78
CDK5RAP3-209ENST00000578663 AMPHP49418 695 aa10.19□□□□□ -0.78
CDK5RAP3-209ENST00000578663 KIF24Q5T7B8 1368 aa10.18□□□□□ -0.78
CDK5RAP3-209ENST00000578663 TATP17735 454 aaPredicted RBP10.18□□□□□ -0.78
CDK5RAP3-209ENST00000578663 TRIM26Q12899 539 aaPredicted RBP10.18□□□□□ -0.78
CDK5RAP3-209ENST00000578663 TMC1Q8TDI8 760 aa10.18□□□□□ -0.78
CDK5RAP3-209ENST00000578663 COG3Q96JB2 828 aa10.18□□□□□ -0.78
CDK5RAP3-209ENST00000578663 BEGAINQ9BUH8 593 aa10.18□□□□□ -0.78
CDK5RAP3-209ENST00000578663 SLC12A5Q9H2X9 1139 aa10.18□□□□□ -0.78
CDK5RAP3-209ENST00000578663 FER1L6Q2WGJ9 1857 aa10.18□□□□□ -0.78
CDK5RAP3-209ENST00000578663 NBPF6Q5VWK0 638 aa10.17□□□□□ -0.78
CDK5RAP3-209ENST00000578663 MPRIPQ6WCQ1 1025 aa10.17□□□□□ -0.78
CDK5RAP3-209ENST00000578663 NBPF15Q8N660 670 aa10.17□□□□□ -0.78
CDK5RAP3-209ENST00000578663 NBPF4Q96M43 638 aa10.17□□□□□ -0.78
CDK5RAP3-209ENST00000578663 NCAPD2Q15021 1401 aa10.16□□□□□ -0.78
CDK5RAP3-209ENST00000578663 INSRP06213 1382 aa10.16□□□□□ -0.78
CDK5RAP3-209ENST00000578663 ZNF831Q5JPB2 1677 aa10.16□□□□□ -0.78
CDK5RAP3-209ENST00000578663 LOC102724428A0A0B4J2F2 783 aa10.16□□□□□ -0.78
CDK5RAP3-209ENST00000578663 CYP27B1O15528 508 aa10.16□□□□□ -0.78
CDK5RAP3-209ENST00000578663 SIK1P57059 783 aa10.16□□□□□ -0.78
CDK5RAP3-209ENST00000578663 CAPNS2Q96L46 248 aa10.16□□□□□ -0.78
CDK5RAP3-209ENST00000578663 CCDC87Q9NVE4 849 aa10.16□□□□□ -0.78
CDK5RAP3-209ENST00000578663 GNPATO15228 680 aa10.15□□□□□ -0.78
CDK5RAP3-209ENST00000578663 CHRNA5P30532 468 aa10.15□□□□□ -0.78
CDK5RAP3-209ENST00000578663 NKX1-1Q15270 411 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-209ENST00000578663 LDHDQ86WU2 507 aa10.15□□□□□ -0.78
CDK5RAP3-209ENST00000578663 NLGN1Q8N2Q7 840 aa10.15□□□□□ -0.78
CDK5RAP3-209ENST00000578663 LINC00116Q8NCU8 138 aa10.15□□□□□ -0.78
CDK5RAP3-209ENST00000578663 PIGBQ92521 554 aa10.15□□□□□ -0.78
CDK5RAP3-209ENST00000578663 FLT4P35916 1363 aa10.14□□□□□ -0.79
CDK5RAP3-209ENST00000578663 CEP290O15078 2479 aa10.14□□□□□ -0.79
CDK5RAP3-209ENST00000578663 ADRA2BP18089 450 aa10.14□□□□□ -0.79
CDK5RAP3-209ENST00000578663 CYP4F22Q6NT55 531 aa10.14□□□□□ -0.79
CDK5RAP3-209ENST00000578663 GPR101Q96P66 508 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-209ENST00000578663 AFDNP55196 1824 aaKnown RBP10.14□□□□□ -0.79
CDK5RAP3-209ENST00000578663 KDRP35968 1356 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 179.8 ms