RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 RBM33Q96EV2 1170 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-208ENST00000578525 KIF2CQ99661 725 aa11.57□□□□□ -0.56
CDK5RAP3-208ENST00000578525 CHMP4AQ9BY43 222 aa11.57□□□□□ -0.56
CDK5RAP3-208ENST00000578525 LMTK3Q96Q04 1460 aa11.57□□□□□ -0.56
CDK5RAP3-208ENST00000578525 ZBTB7CA1YPR0 619 aa11.56□□□□□ -0.56
CDK5RAP3-208ENST00000578525 SMARCA5O60264 1052 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-208ENST00000578525 MST1RQ04912 1400 aa11.56□□□□□ -0.56
CDK5RAP3-208ENST00000578525 PLEKHO1Q53GL0 409 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-208ENST00000578525 AKAP4Q5JQC9 854 aa11.56□□□□□ -0.56
CDK5RAP3-208ENST00000578525 HDGFL1Q5TGJ6 251 aa11.56□□□□□ -0.56
CDK5RAP3-208ENST00000578525 CASC1Q6TDU7 716 aa11.56□□□□□ -0.56
CDK5RAP3-208ENST00000578525 SPRYD3Q8NCJ5 442 aa11.56□□□□□ -0.56
CDK5RAP3-208ENST00000578525 OTUD7AQ8TE49 926 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-208ENST00000578525 HSP90AB1P08238 724 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-208ENST00000578525 DDIT3P35638 169 aa11.55□□□□□ -0.56
CDK5RAP3-208ENST00000578525 EIF4A1P60842 406 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-208ENST00000578525 ATP8B2P98198 1209 aa11.55□□□□□ -0.56
CDK5RAP3-208ENST00000578525 AMOTQ4VCS5 1084 aa11.55□□□□□ -0.56
CDK5RAP3-208ENST00000578525 ZNF530Q6P9A1 599 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-208ENST00000578525 ARHGEF25Q86VW2 580 aa11.55□□□□□ -0.56
CDK5RAP3-208ENST00000578525 NECTIN2Q92692 538 aa11.55□□□□□ -0.56
CDK5RAP3-208ENST00000578525 ORAI2Q96SN7 254 aa11.55□□□□□ -0.56
CDK5RAP3-208ENST00000578525 OSBPL3Q9H4L5 887 aa11.55□□□□□ -0.56
CDK5RAP3-208ENST00000578525 CIZ1Q9ULV3 898 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-208ENST00000578525 APBB1O00213 710 aa11.54□□□□□ -0.56
CDK5RAP3-208ENST00000578525 GCP02774 474 aa11.54□□□□□ -0.56
CDK5RAP3-208ENST00000578525 SDSP20132 328 aa11.54□□□□□ -0.56
CDK5RAP3-208ENST00000578525 C1orf167Q5SNV9 1468 aa11.54□□□□□ -0.56
CDK5RAP3-208ENST00000578525 ALS2Q96Q42 1657 aa11.53□□□□□ -0.56
CDK5RAP3-208ENST00000578525 PXDNQ92626 1479 aa11.53□□□□□ -0.56
CDK5RAP3-208ENST00000578525 K7ELQ4 463 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-208ENST00000578525 MCM4P33991 863 aa11.53□□□□□ -0.56
CDK5RAP3-208ENST00000578525 RABEP1Q15276 862 aa11.53□□□□□ -0.56
CDK5RAP3-208ENST00000578525 KRT28Q7Z3Y7 464 aa11.53□□□□□ -0.56
CDK5RAP3-208ENST00000578525 PROSER2Q86WR7 435 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-208ENST00000578525 LRRC59Q96AG4 307 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-208ENST00000578525 LGR6Q9HBX8 967 aa11.53□□□□□ -0.56
CDK5RAP3-208ENST00000578525 IBTKQ9P2D0 1353 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-208ENST00000578525 ADAMTS7Q9UKP4 1686 aa11.52□□□□□ -0.56
CDK5RAP3-208ENST00000578525 TUBGCP6Q96RT7 1819 aa11.52□□□□□ -0.57
CDK5RAP3-208ENST00000578525 RNMTO43148 476 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-208ENST00000578525 UBTFL1P0CB47 393 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-208ENST00000578525 PDE1AP54750 535 aa11.52□□□□□ -0.57
CDK5RAP3-208ENST00000578525 TEFQ10587 303 aa11.52□□□□□ -0.57
CDK5RAP3-208ENST00000578525 ANKRD24Q8TF21 1146 aa11.52□□□□□ -0.57
CDK5RAP3-208ENST00000578525 USP26Q9BXU7 913 aa11.52□□□□□ -0.57
CDK5RAP3-208ENST00000578525 LRRCC1Q9C099 1032 aa11.52□□□□□ -0.57
CDK5RAP3-208ENST00000578525 LRRFIP2Q9Y608 721 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-208ENST00000578525 SALL3Q9BXA9 1300 aa11.52□□□□□ -0.57
CDK5RAP3-208ENST00000578525 XPCQ01831 940 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-208ENST00000578525 C1orf141Q5JVX7 400 aa11.51□□□□□ -0.57
CDK5RAP3-208ENST00000578525 SRCIN1Q9C0H9 1055 aa11.51□□□□□ -0.57
CDK5RAP3-208ENST00000578525 PHAXQ9H814 394 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-208ENST00000578525 EXOC6BQ9Y2D4 811 aa11.51□□□□□ -0.57
CDK5RAP3-208ENST00000578525 AOX1Q06278 1338 aa11.51□□□□□ -0.57
CDK5RAP3-208ENST00000578525 SIPA1L3O60292 1781 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-208ENST00000578525 ABCC6O95255 1503 aa11.5□□□□□ -0.57
CDK5RAP3-208ENST00000578525 PNMA6EA0A0J9YXQ4 647 aa11.5□□□□□ -0.57
CDK5RAP3-208ENST00000578525 BTBD11A6QL63 1104 aa11.5□□□□□ -0.57
CDK5RAP3-208ENST00000578525 DDX11L8A8MPP1 907 aa11.5□□□□□ -0.57
CDK5RAP3-208ENST00000578525 REC8O95072 547 aa11.5□□□□□ -0.57
CDK5RAP3-208ENST00000578525 USP44Q9H0E7 712 aa11.5□□□□□ -0.57
CDK5RAP3-208ENST00000578525 ERC2O15083 957 aa11.49□□□□□ -0.57
CDK5RAP3-208ENST00000578525 KCNQ3O43525 872 aa11.49□□□□□ -0.57
CDK5RAP3-208ENST00000578525 RAB11FIP3O75154 756 aa11.49□□□□□ -0.57
CDK5RAP3-208ENST00000578525 CD2BP2O95400 341 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-208ENST00000578525 EIF2S2P20042 333 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-208ENST00000578525 MX1P20591 662 aa11.49□□□□□ -0.57
CDK5RAP3-208ENST00000578525 POLA2Q14181 598 aa11.49□□□□□ -0.57
CDK5RAP3-208ENST00000578525 LMOD2Q6P5Q4 547 aa11.49□□□□□ -0.57
CDK5RAP3-208ENST00000578525 MPRIPQ6WCQ1 1025 aa11.49□□□□□ -0.57
CDK5RAP3-208ENST00000578525 SSH3Q8TE77 659 aa11.49□□□□□ -0.57
CDK5RAP3-208ENST00000578525 DNAAF4Q8WXU2 420 aa11.49□□□□□ -0.57
CDK5RAP3-208ENST00000578525 RBM42Q9BTD8 480 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-208ENST00000578525 C19orf44Q9H6X5 657 aa11.49□□□□□ -0.57
CDK5RAP3-208ENST00000578525 CHPF2Q9P2E5 772 aa11.49□□□□□ -0.57
CDK5RAP3-208ENST00000578525 STAP2Q9UGK3 403 aa11.49□□□□□ -0.57
CDK5RAP3-208ENST00000578525 DCCP43146 1447 aa11.49□□□□□ -0.57
CDK5RAP3-208ENST00000578525 HSP90AA1P07900 732 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-208ENST00000578525 RAB3GAP1Q15042 981 aa11.48□□□□□ -0.57
CDK5RAP3-208ENST00000578525 BEND3Q5T5X7 828 aa11.48□□□□□ -0.57
CDK5RAP3-208ENST00000578525 HEG1Q9ULI3 1381 aa11.48□□□□□ -0.57
CDK5RAP3-208ENST00000578525 RGPD5Q99666 1765 aa11.47□□□□□ -0.57
CDK5RAP3-208ENST00000578525 ADCY9O60503 1353 aa11.47□□□□□ -0.57
CDK5RAP3-208ENST00000578525 PTMSP20962 102 aa11.47□□□□□ -0.57
CDK5RAP3-208ENST00000578525 GBP4Q96PP9 640 aa11.47□□□□□ -0.57
CDK5RAP3-208ENST00000578525 DBF4Q9UBU7 674 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-208ENST00000578525 PLEKHG2Q9H7P9 1386 aa11.46□□□□□ -0.57
CDK5RAP3-208ENST00000578525 ALDH1L1O75891 902 aa11.46□□□□□ -0.57
CDK5RAP3-208ENST00000578525 L1TD1Q5T7N2 865 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-208ENST00000578525 PPP1R42Q7Z4L9 355 aa11.46□□□□□ -0.57
CDK5RAP3-208ENST00000578525 TNPO1Q92973 898 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-208ENST00000578525 COL18A1P39060 1754 aa11.46□□□□□ -0.58
CDK5RAP3-208ENST00000578525 ERBB3P21860 1342 aa11.45□□□□□ -0.58
CDK5RAP3-208ENST00000578525 PI4KAP2A4QPH2 592 aa11.45□□□□□ -0.58
CDK5RAP3-208ENST00000578525 ST18O60284 1047 aa11.45□□□□□ -0.58
CDK5RAP3-208ENST00000578525 TRAK2O60296 914 aa11.45□□□□□ -0.58
CDK5RAP3-208ENST00000578525 PLEKHG5O94827 1062 aa11.45□□□□□ -0.58
CDK5RAP3-208ENST00000578525 ATF3P18847 181 aa11.45□□□□□ -0.58
CDK5RAP3-208ENST00000578525 HSP90AB4PQ58FF6 505 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms