RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 IL17REQ8NFR9 667 aa28.83■■■□□ 2.21
CDC42EP4-203ENST00000578516 NFATC2IPQ8NCF5 419 aa28.82■■■□□ 2.2
CDC42EP4-203ENST00000578516 MAPK8IP3Q9UPT6 1336 aa28.81■■■□□ 2.2
CDC42EP4-203ENST00000578516 ATG3Q9NT62 314 aa28.81■■■□□ 2.2
CDC42EP4-203ENST00000578516 SENP3-EIF4A1A0A087X0R7 540 aa28.8■■■□□ 2.2
CDC42EP4-203ENST00000578516 MCM10Q7L590 875 aa28.8■■■□□ 2.2
CDC42EP4-203ENST00000578516 RRP7AQ9Y3A4 280 aaKnown RBP28.8■■■□□ 2.2
CDC42EP4-203ENST00000578516 UBR2Q8IWV8 1755 aa28.8■■■□□ 2.2
CDC42EP4-203ENST00000578516 SLC52A2Q9HAB3 445 aa28.79■■■□□ 2.2
CDC42EP4-203ENST00000578516 TJP1Q07157 1748 aa28.79■■■□□ 2.2
CDC42EP4-203ENST00000578516 NFE2L2Q16236 605 aa28.78■■■□□ 2.2
CDC42EP4-203ENST00000578516 R3HDM1Q15032 1099 aaKnown RBP28.77■■■□□ 2.2
CDC42EP4-203ENST00000578516 THUMPD2Q9BTF0 503 aaKnown RBP28.77■■■□□ 2.2
CDC42EP4-203ENST00000578516 CCNL1Q9UK58 526 aaPredicted RBP28.77■■■□□ 2.2
CDC42EP4-203ENST00000578516 CEMIPQ8WUJ3 1361 aa28.76■■■□□ 2.2
CDC42EP4-203ENST00000578516 SLC39A6Q13433 755 aa28.76■■■□□ 2.19
CDC42EP4-203ENST00000578516 COL5A3P25940 1745 aaPredicted RBP28.76■■■□□ 2.19
CDC42EP4-203ENST00000578516 KCPQ6ZWJ8 1503 aa28.75■■■□□ 2.19
CDC42EP4-203ENST00000578516 ZNF827Q17R98 1081 aa28.75■■■□□ 2.19
CDC42EP4-203ENST00000578516 C4BP0C0L5 1744 aa28.74■■■□□ 2.19
CDC42EP4-203ENST00000578516 NEFMP07197 916 aa28.74■■■□□ 2.19
CDC42EP4-203ENST00000578516 PNISRQ8TF01 805 aaKnown RBP28.74■■■□□ 2.19
CDC42EP4-203ENST00000578516 SLC4A9Q96Q91 983 aa28.74■■■□□ 2.19
CDC42EP4-203ENST00000578516 SMARCC1Q92922 1105 aaPredicted RBP28.73■■■□□ 2.19
CDC42EP4-203ENST00000578516 CASZ1Q86V15 1759 aa28.73■■■□□ 2.19
CDC42EP4-203ENST00000578516 NEUROD2Q15784 382 aa28.72■■■□□ 2.19
CDC42EP4-203ENST00000578516 DIEXFQ68CQ4 756 aaKnown RBP28.72■■■□□ 2.19
CDC42EP4-203ENST00000578516 RUNDC1Q96C34 613 aa28.72■■■□□ 2.19
CDC42EP4-203ENST00000578516 KDM3BQ7LBC6 1761 aa28.71■■■□□ 2.19
CDC42EP4-203ENST00000578516 LOC102724428A0A0B4J2F2 783 aa28.71■■■□□ 2.19
CDC42EP4-203ENST00000578516 TMPOP42166 694 aaKnown RBP28.71■■■□□ 2.19
CDC42EP4-203ENST00000578516 SIK1P57059 783 aa28.71■■■□□ 2.19
CDC42EP4-203ENST00000578516 ITPK1Q13572 414 aa28.71■■■□□ 2.19
CDC42EP4-203ENST00000578516 RBM42Q9BTD8 480 aaKnown RBP28.71■■■□□ 2.19
CDC42EP4-203ENST00000578516 PNNQ9H307 717 aaKnown RBP28.71■■■□□ 2.19
CDC42EP4-203ENST00000578516 ZNF831Q5JPB2 1677 aa28.7■■■□□ 2.19
CDC42EP4-203ENST00000578516 PTCD1O75127 700 aaKnown RBP28.7■■■□□ 2.18
CDC42EP4-203ENST00000578516 TEFQ10587 303 aa28.7■■■□□ 2.18
CDC42EP4-203ENST00000578516 SLC27A3Q5K4L6 730 aa28.7■■■□□ 2.18
CDC42EP4-203ENST00000578516 RTF1Q92541 710 aaKnown RBP28.7■■■□□ 2.18
CDC42EP4-203ENST00000578516 QSER1Q2KHR3 1735 aa28.69■■■□□ 2.18
CDC42EP4-203ENST00000578516 PDGFDQ9GZP0 370 aaPredicted RBP28.69■■■□□ 2.18
CDC42EP4-203ENST00000578516 UBR3Q6ZT12 1888 aa28.69■■■□□ 2.18
CDC42EP4-203ENST00000578516 MYH14Q7Z406 1995 aaKnown RBP28.68■■■□□ 2.18
CDC42EP4-203ENST00000578516 KCNQ3O43525 872 aa28.68■■■□□ 2.18
CDC42EP4-203ENST00000578516 RIPK4P57078 832 aa28.68■■■□□ 2.18
CDC42EP4-203ENST00000578516 LINC00116Q8NCU8 138 aa28.68■■■□□ 2.18
CDC42EP4-203ENST00000578516 CICQ96RK0 1608 aaPredicted RBP28.68■■■□□ 2.18
CDC42EP4-203ENST00000578516 APAF1O14727 1248 aa28.66■■■□□ 2.18
CDC42EP4-203ENST00000578516 NBPF14Q5TI25 921 aa28.66■■■□□ 2.18
CDC42EP4-203ENST00000578516 SMIM5Q71RC9 77 aa28.66■■■□□ 2.18
CDC42EP4-203ENST00000578516 STK32BQ9NY57 414 aa28.66■■■□□ 2.18
CDC42EP4-203ENST00000578516 ATP6V1AP38606 617 aa28.65■■■□□ 2.18
CDC42EP4-203ENST00000578516 FAM9BQ8IZU0 186 aa28.65■■■□□ 2.18
CDC42EP4-203ENST00000578516 AKT1S1Q96B36 256 aa28.65■■■□□ 2.18
CDC42EP4-203ENST00000578516 SLC15A2Q16348 729 aa28.64■■■□□ 2.18
CDC42EP4-203ENST00000578516 AMIGO3Q86WK7 504 aa28.64■■■□□ 2.18
CDC42EP4-203ENST00000578516 MIS18AQ9NYP9 233 aa28.64■■■□□ 2.18
CDC42EP4-203ENST00000578516 HTATSF1O43719 755 aaKnown RBP28.63■■■□□ 2.17
CDC42EP4-203ENST00000578516 MIER1Q8N108 512 aa28.62■■■□□ 2.17
CDC42EP4-203ENST00000578516 TRIM35Q9UPQ4 493 aa28.62■■■□□ 2.17
CDC42EP4-203ENST00000578516 BTBD11A6QL63 1104 aa28.6■■■□□ 2.17
CDC42EP4-203ENST00000578516 ZNF496Q96IT1 587 aaPredicted RBP28.59■■■□□ 2.17
CDC42EP4-203ENST00000578516 ZNF790Q6PG37 636 aa28.58■■■□□ 2.17
CDC42EP4-203ENST00000578516 DNAJC10Q8IXB1 793 aa28.58■■■□□ 2.17
CDC42EP4-203ENST00000578516 PNPLA7Q6ZV29 1317 aa28.57■■■□□ 2.16
CDC42EP4-203ENST00000578516 C4AP0C0L4 1744 aa28.57■■■□□ 2.16
CDC42EP4-203ENST00000578516 TTC5Q8N0Z6 440 aa28.56■■■□□ 2.16
CDC42EP4-203ENST00000578516 LAMB4A4D0S4 1761 aa28.55■■■□□ 2.16
CDC42EP4-203ENST00000578516 PRAMEF22A3QJZ6 481 aa28.54■■■□□ 2.16
CDC42EP4-203ENST00000578516 TAF7Q15545 349 aaPredicted RBP28.54■■■□□ 2.16
CDC42EP4-203ENST00000578516 TFCP2L1Q9NZI6 479 aa28.54■■■□□ 2.16
CDC42EP4-203ENST00000578516 HEG1Q9ULI3 1381 aa28.53■■■□□ 2.16
CDC42EP4-203ENST00000578516 PHF14O94880 888 aa28.53■■■□□ 2.16
CDC42EP4-203ENST00000578516 AK7Q96M32 723 aa28.53■■■□□ 2.16
CDC42EP4-203ENST00000578516 LMOD3Q0VAK6 560 aa28.52■■■□□ 2.16
CDC42EP4-203ENST00000578516 SALL2Q9Y467 1007 aaPredicted RBP28.52■■■□□ 2.16
CDC42EP4-203ENST00000578516 GNPATO15228 680 aa28.51■■■□□ 2.15
CDC42EP4-203ENST00000578516 CCER2I3L3R5 266 aa28.5■■■□□ 2.15
CDC42EP4-203ENST00000578516 ZBTB7AO95365 584 aa28.5■■■□□ 2.15
CDC42EP4-203ENST00000578516 CRKLP46109 303 aaKnown RBP28.49■■■□□ 2.15
CDC42EP4-203ENST00000578516 COL23A1Q86Y22 540 aaPredicted RBP28.49■■■□□ 2.15
CDC42EP4-203ENST00000578516 LRP5O75197 1615 aa28.49■■■□□ 2.15
CDC42EP4-203ENST00000578516 CNTNAP4Q9C0A0 1308 aa28.48■■■□□ 2.15
CDC42EP4-203ENST00000578516 FMNL2Q96PY5 1086 aa28.48■■■□□ 2.15
CDC42EP4-203ENST00000578516 LAS1LQ9Y4W2 734 aaKnown RBP28.48■■■□□ 2.15
CDC42EP4-203ENST00000578516 TSPYL4Q9UJ04 414 aa28.47■■■□□ 2.15
CDC42EP4-203ENST00000578516 CYP19A1P11511 503 aaPredicted RBP28.46■■■□□ 2.15
CDC42EP4-203ENST00000578516 INTS5Q6P9B9 1019 aaKnown RBP28.46■■■□□ 2.15
CDC42EP4-203ENST00000578516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.45■■■□□ 2.14
CDC42EP4-203ENST00000578516 MSH5O43196 834 aa28.45■■■□□ 2.14
CDC42EP4-203ENST00000578516 COL24A1Q17RW2 1714 aa28.45■■■□□ 2.14
CDC42EP4-203ENST00000578516 PIP4K2AP48426 406 aaPredicted RBP28.44■■■□□ 2.14
CDC42EP4-203ENST00000578516 ATF5Q9Y2D1 282 aaPredicted RBP28.44■■■□□ 2.14
CDC42EP4-203ENST00000578516 ZBTB1Q9Y2K1 713 aa28.44■■■□□ 2.14
CDC42EP4-203ENST00000578516 EIF4A1P60842 406 aaKnown RBP28.43■■■□□ 2.14
CDC42EP4-203ENST00000578516 KRT24Q2M2I5 525 aa28.43■■■□□ 2.14
CDC42EP4-203ENST00000578516 VSIG10Q8N0Z9 540 aa28.43■■■□□ 2.14
CDC42EP4-203ENST00000578516 MSL1Q68DK7 614 aa28.42■■■□□ 2.14
CDC42EP4-203ENST00000578516 CCDC87Q9NVE4 849 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms