RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 CABP4P57796 275 aa14.26□□□□□ -0.13
ERBB2-206ENST00000578373 RRP9O43818 475 aaKnown RBP14.26□□□□□ -0.13
ERBB2-206ENST00000578373 RAB11FIP4Q86YS3 637 aa14.26□□□□□ -0.13
ERBB2-206ENST00000578373 MAP7D2Q96T17 732 aa14.26□□□□□ -0.13
ERBB2-206ENST00000578373 MAP3K11Q16584 847 aa14.26□□□□□ -0.13
ERBB2-206ENST00000578373 CCDC82Q8N4S0 544 aa14.26□□□□□ -0.13
ERBB2-206ENST00000578373 CCDC112Q8NEF3 446 aa14.26□□□□□ -0.13
ERBB2-206ENST00000578373 DNAAF4Q8WXU2 420 aa14.26□□□□□ -0.13
ERBB2-206ENST00000578373 CNNM1Q9NRU3 951 aa14.25□□□□□ -0.13
ERBB2-206ENST00000578373 AMOTL2Q9Y2J4 779 aa14.25□□□□□ -0.13
ERBB2-206ENST00000578373 ACEP12821 1306 aa14.25□□□□□ -0.13
ERBB2-206ENST00000578373 CCT2P78371 535 aaKnown RBP14.25□□□□□ -0.13
ERBB2-206ENST00000578373 CBX1P83916 185 aa14.25□□□□□ -0.13
ERBB2-206ENST00000578373 OLFM4Q6UX06 510 aa14.25□□□□□ -0.13
ERBB2-206ENST00000578373 SERPINC1P01008 464 aa14.25□□□□□ -0.13
ERBB2-206ENST00000578373 LIMCH1Q9UPQ0 1083 aa14.25□□□□□ -0.13
ERBB2-206ENST00000578373 FANCAO15360 1455 aa14.25□□□□□ -0.13
ERBB2-206ENST00000578373 POLR3AO14802 1390 aaPredicted RBP14.25□□□□□ -0.13
ERBB2-206ENST00000578373 SPATA31E1Q6ZUB1 1445 aa14.25□□□□□ -0.13
ERBB2-206ENST00000578373 SAMD1Q6SPF0 538 aaPredicted RBP14.25□□□□□ -0.13
ERBB2-206ENST00000578373 PIBF1Q8WXW3 757 aa14.25□□□□□ -0.13
ERBB2-206ENST00000578373 PIP4K2AP48426 406 aaPredicted RBP14.24□□□□□ -0.13
ERBB2-206ENST00000578373 TTC39AQ5SRH9 613 aa14.24□□□□□ -0.13
ERBB2-206ENST00000578373 THEMISQ8N1K5 641 aaPredicted RBP14.24□□□□□ -0.13
ERBB2-206ENST00000578373 MYD88Q99836 296 aa14.24□□□□□ -0.13
ERBB2-206ENST00000578373 LRRC2Q9BYS8 371 aa14.24□□□□□ -0.13
ERBB2-206ENST00000578373 ATP5J2-PTCD1G3V325 749 aa14.24□□□□□ -0.13
ERBB2-206ENST00000578373 ANKRD44Q8N8A2 993 aa14.24□□□□□ -0.13
ERBB2-206ENST00000578373 RAPGEF6Q8TEU7 1601 aa14.24□□□□□ -0.13
ERBB2-206ENST00000578373 IPO7O95373 1038 aaKnown RBP14.23□□□□□ -0.13
ERBB2-206ENST00000578373 ANKRD1Q15327 319 aa14.23□□□□□ -0.13
ERBB2-206ENST00000578373 PPP6R1Q9UPN7 881 aa14.23□□□□□ -0.13
ERBB2-206ENST00000578373 ADCY5O95622 1261 aa14.23□□□□□ -0.13
ERBB2-206ENST00000578373 CPA1P15085 419 aa14.23□□□□□ -0.13
ERBB2-206ENST00000578373 GJB2P29033 226 aa14.23□□□□□ -0.13
ERBB2-206ENST00000578373 TOM1L2Q6ZVM7 507 aa14.23□□□□□ -0.13
ERBB2-206ENST00000578373 PLEKHM2Q8IWE5 1019 aa14.23□□□□□ -0.13
ERBB2-206ENST00000578373 TRMT1Q9NXH9 659 aaKnown RBP14.23□□□□□ -0.13
ERBB2-206ENST00000578373 STX6O43752 255 aa14.23□□□□□ -0.13
ERBB2-206ENST00000578373 CCDC158Q5M9N0 1113 aa14.23□□□□□ -0.13
ERBB2-206ENST00000578373 NUP133Q8WUM0 1156 aa14.23□□□□□ -0.13
ERBB2-206ENST00000578373 C16orf45Q96MC5 204 aaPredicted RBP14.23□□□□□ -0.13
ERBB2-206ENST00000578373 ZNF396Q96N95 335 aaPredicted RBP14.23□□□□□ -0.13
ERBB2-206ENST00000578373 SNRKQ9NRH2 765 aa14.23□□□□□ -0.13
ERBB2-206ENST00000578373 CEP126Q9P2H0 1117 aa14.23□□□□□ -0.13
ERBB2-206ENST00000578373 A2MP01023 1474 aa14.23□□□□□ -0.13
ERBB2-206ENST00000578373 ZSCAN31Q96LW9 406 aaPredicted RBP14.23□□□□□ -0.13
ERBB2-206ENST00000578373 CNPY2Q9Y2B0 182 aa14.23□□□□□ -0.13
ERBB2-206ENST00000578373 IL16Q14005 1332 aa14.22□□□□□ -0.13
ERBB2-206ENST00000578373 IDH1O75874 414 aaKnown RBP14.22□□□□□ -0.13
ERBB2-206ENST00000578373 CCDC183Q5T5S1 534 aa14.22□□□□□ -0.13
ERBB2-206ENST00000578373 G2E3Q7L622 706 aa14.22□□□□□ -0.13
ERBB2-206ENST00000578373 TTC12Q9H892 705 aaPredicted RBP14.22□□□□□ -0.13
ERBB2-206ENST00000578373 HOOK1Q9UJC3 728 aaKnown RBP14.22□□□□□ -0.13
ERBB2-206ENST00000578373 MAGI3Q5TCQ9 1506 aa14.22□□□□□ -0.13
ERBB2-206ENST00000578373 ANKRD36BQ8N2N9 1353 aa14.22□□□□□ -0.13
ERBB2-206ENST00000578373 CFAP43Q8NDM7 1665 aa14.22□□□□□ -0.13
ERBB2-206ENST00000578373 EIF4A2Q14240 407 aaKnown RBP14.22□□□□□ -0.13
ERBB2-206ENST00000578373 TBC1D2BQ9UPU7 963 aa14.22□□□□□ -0.13
ERBB2-206ENST00000578373 KDM5BQ9UGL1 1544 aa14.22□□□□□ -0.13
ERBB2-206ENST00000578373 CLCN1P35523 988 aa14.22□□□□□ -0.13
ERBB2-206ENST00000578373 CCDC57Q2TAC2 916 aa14.22□□□□□ -0.13
ERBB2-206ENST00000578373 ISM2Q6H9L7 571 aa14.22□□□□□ -0.13
ERBB2-206ENST00000578373 CHAMP1Q96JM3 812 aa14.22□□□□□ -0.13
ERBB2-206ENST00000578373 TRIM35Q9UPQ4 493 aa14.22□□□□□ -0.13
ERBB2-206ENST00000578373 PA2G4Q9UQ80 394 aaKnown RBP14.22□□□□□ -0.13
ERBB2-206ENST00000578373 BIN1O00499 593 aa14.21□□□□□ -0.13
ERBB2-206ENST00000578373 ZBTB7BO15156 539 aaPredicted RBP14.21□□□□□ -0.13
ERBB2-206ENST00000578373 MAPK8IP2Q13387 824 aaPredicted RBP14.21□□□□□ -0.13
ERBB2-206ENST00000578373 RHPN1Q8TCX5 695 aa14.21□□□□□ -0.13
ERBB2-206ENST00000578373 MTERF4Q7Z6M4 381 aaKnown RBP14.21□□□□□ -0.13
ERBB2-206ENST00000578373 ANKRD20A12PQ8NF67 263 aa14.21□□□□□ -0.13
ERBB2-206ENST00000578373 MAP3K2Q9Y2U5 619 aa14.21□□□□□ -0.13
ERBB2-206ENST00000578373 KAT6BQ8WYB5 2073 aa14.2□□□□□ -0.14
ERBB2-206ENST00000578373 ARHGAP45Q92619 1136 aa14.2□□□□□ -0.14
ERBB2-206ENST00000578373 ECHDC1Q9NTX5 307 aa14.2□□□□□ -0.14
ERBB2-206ENST00000578373 COL17A1Q9UMD9 1497 aaPredicted RBP14.2□□□□□ -0.14
ERBB2-206ENST00000578373 NAP1L1P55209 391 aaKnown RBP14.2□□□□□ -0.14
ERBB2-206ENST00000578373 RAB3GAP1Q15042 981 aa14.2□□□□□ -0.14
ERBB2-206ENST00000578373 CEP85Q6P2H3 762 aa14.2□□□□□ -0.14
ERBB2-206ENST00000578373 USP48Q86UV5 1035 aa14.2□□□□□ -0.14
ERBB2-206ENST00000578373 DCTPP1Q9H773 170 aa14.2□□□□□ -0.14
ERBB2-206ENST00000578373 PTPRCP08575 1304 aa14.2□□□□□ -0.14
ERBB2-206ENST00000578373 HAND2P61296 217 aa14.2□□□□□ -0.14
ERBB2-206ENST00000578373 ESYT1Q9BSJ8 1104 aa14.2□□□□□ -0.14
ERBB2-206ENST00000578373 A0A1W2PP64 1363 aa14.2□□□□□ -0.14
ERBB2-206ENST00000578373 ARGLU1Q9NWB6 273 aaPredicted RBP14.19□□□□□ -0.14
ERBB2-206ENST00000578373 CHPF2Q9P2E5 772 aa14.19□□□□□ -0.14
ERBB2-206ENST00000578373 CFAP45Q9UL16 551 aa14.19□□□□□ -0.14
ERBB2-206ENST00000578373 KDM6BO15054 1643 aa14.19□□□□□ -0.14
ERBB2-206ENST00000578373 MTHFSDQ2M296 383 aaKnown RBP14.19□□□□□ -0.14
ERBB2-206ENST00000578373 PDCL2Q8N4E4 241 aa14.19□□□□□ -0.14
ERBB2-206ENST00000578373 PIK3C2GO75747 1445 aa14.19□□□□□ -0.14
ERBB2-206ENST00000578373 UBE3BQ7Z3V4 1068 aa14.19□□□□□ -0.14
ERBB2-206ENST00000578373 PRDM11Q9NQV5 511 aa14.19□□□□□ -0.14
ERBB2-206ENST00000578373 WDR62O43379 1518 aa14.19□□□□□ -0.14
ERBB2-206ENST00000578373 CEP57L1Q8IYX8 460 aa14.18□□□□□ -0.14
ERBB2-206ENST00000578373 SNX21Q969T3 373 aa14.18□□□□□ -0.14
ERBB2-206ENST00000578373 SPDYE4A6NLX3 237 aa14.18□□□□□ -0.14
ERBB2-206ENST00000578373 SLC39A6Q13433 755 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms