RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 XPCQ01831 940 aaPredicted RBP14.17□□□□□ -0.14
GGA3-205ENST00000578348 NBPF6Q5VWK0 638 aa14.17□□□□□ -0.14
GGA3-205ENST00000578348 TBC1D9Q6ZT07 1266 aa14.17□□□□□ -0.14
GGA3-205ENST00000578348 NBPF4Q96M43 638 aa14.17□□□□□ -0.14
GGA3-205ENST00000578348 TMEM94Q12767 1356 aa14.17□□□□□ -0.14
GGA3-205ENST00000578348 HSP90AA1P07900 732 aaKnown RBP14.17□□□□□ -0.14
GGA3-205ENST00000578348 IL17REQ8NFR9 667 aa14.17□□□□□ -0.14
GGA3-205ENST00000578348 KIF2CQ99661 725 aa14.17□□□□□ -0.14
GGA3-205ENST00000578348 ATF3P18847 181 aa14.16□□□□□ -0.14
GGA3-205ENST00000578348 TNPO1Q92973 898 aaKnown RBP14.16□□□□□ -0.14
GGA3-205ENST00000578348 FOXD4L1Q9NU39 408 aa14.16□□□□□ -0.14
GGA3-205ENST00000578348 ZBTB7CA1YPR0 619 aa14.16□□□□□ -0.14
GGA3-205ENST00000578348 CD2BP2O95400 341 aaKnown RBP14.16□□□□□ -0.14
GGA3-205ENST00000578348 TAF7Q15545 349 aaPredicted RBP14.16□□□□□ -0.14
GGA3-205ENST00000578348 CEMIPQ8WUJ3 1361 aa14.16□□□□□ -0.14
GGA3-205ENST00000578348 SLC4A2P04920 1241 aa14.15□□□□□ -0.14
GGA3-205ENST00000578348 RBM42Q9BTD8 480 aaKnown RBP14.15□□□□□ -0.14
GGA3-205ENST00000578348 LMOD2Q6P5Q4 547 aa14.14□□□□□ -0.15
GGA3-205ENST00000578348 STK31Q9BXU1 1019 aa14.14□□□□□ -0.15
GGA3-205ENST00000578348 CACNA1FO60840 1977 aa14.14□□□□□ -0.15
GGA3-205ENST00000578348 CCDC30Q5VVM6 783 aa14.13□□□□□ -0.15
GGA3-205ENST00000578348 CIZ1Q9ULV3 898 aaPredicted RBP14.13□□□□□ -0.15
GGA3-205ENST00000578348 KDM3BQ7LBC6 1761 aa14.13□□□□□ -0.15
GGA3-205ENST00000578348 K7ELQ4 463 aaPredicted RBP14.13□□□□□ -0.15
GGA3-205ENST00000578348 MRE11P49959 708 aa14.13□□□□□ -0.15
GGA3-205ENST00000578348 RAB3GAP1Q15042 981 aa14.13□□□□□ -0.15
GGA3-205ENST00000578348 AMOTQ4VCS5 1084 aa14.13□□□□□ -0.15
GGA3-205ENST00000578348 PLEKHO1Q53GL0 409 aaPredicted RBP14.13□□□□□ -0.15
GGA3-205ENST00000578348 ANKRD24Q8TF21 1146 aa14.13□□□□□ -0.15
GGA3-205ENST00000578348 GBP4Q96PP9 640 aa14.13□□□□□ -0.15
GGA3-205ENST00000578348 OVOS2A0A0G2JMS6 1433 aa14.13□□□□□ -0.15
GGA3-205ENST00000578348 ATP10DQ9P241 1426 aa14.13□□□□□ -0.15
GGA3-205ENST00000578348 CDC45O75419 566 aa14.12□□□□□ -0.15
GGA3-205ENST00000578348 LRRC59Q96AG4 307 aaKnown RBP14.12□□□□□ -0.15
GGA3-205ENST00000578348 N4BP2Q86UW6 1770 aaPredicted RBP14.12□□□□□ -0.15
GGA3-205ENST00000578348 LMTK3Q96Q04 1460 aa14.12□□□□□ -0.15
GGA3-205ENST00000578348 CCT4P50991 539 aaKnown RBP14.12□□□□□ -0.15
GGA3-205ENST00000578348 AKAP4Q5JQC9 854 aa14.12□□□□□ -0.15
GGA3-205ENST00000578348 CADPS2Q86UW7 1296 aa14.12□□□□□ -0.15
GGA3-205ENST00000578348 GRPEL1Q9HAV7 217 aa14.12□□□□□ -0.15
GGA3-205ENST00000578348 GSPT1P15170 499 aaKnown RBP14.11□□□□□ -0.15
GGA3-205ENST00000578348 ANKRD44Q8N8A2 993 aa14.11□□□□□ -0.15
GGA3-205ENST00000578348 ZNF530Q6P9A1 599 aaPredicted RBP14.11□□□□□ -0.15
GGA3-205ENST00000578348 G2E3Q7L622 706 aa14.11□□□□□ -0.15
GGA3-205ENST00000578348 RPAP2Q8IXW5 612 aaPredicted RBP14.11□□□□□ -0.15
GGA3-205ENST00000578348 ABCC6O95255 1503 aa14.1□□□□□ -0.15
GGA3-205ENST00000578348 NPHP3Q7Z494 1330 aa14.1□□□□□ -0.15
GGA3-205ENST00000578348 RGPD5Q99666 1765 aa14.1□□□□□ -0.15
GGA3-205ENST00000578348 PXDNLA1KZ92 1463 aa14.1□□□□□ -0.15
GGA3-205ENST00000578348 PLEKHM2Q8IWE5 1019 aa14.1□□□□□ -0.15
GGA3-205ENST00000578348 TNS3Q68CZ2 1445 aa14.09□□□□□ -0.15
GGA3-205ENST00000578348 HOXB7P09629 217 aa14.09□□□□□ -0.15
GGA3-205ENST00000578348 PXDNQ92626 1479 aa14.09□□□□□ -0.15
GGA3-205ENST00000578348 XIRP1Q702N8 1843 aaKnown RBP14.09□□□□□ -0.15
GGA3-205ENST00000578348 FLIIQ13045 1269 aa14.08□□□□□ -0.15
GGA3-205ENST00000578348 CEP85Q6P2H3 762 aa14.08□□□□□ -0.15
GGA3-205ENST00000578348 CHMP4AQ9BY43 222 aa14.08□□□□□ -0.15
GGA3-205ENST00000578348 DCTPP1Q9H773 170 aa14.08□□□□□ -0.15
GGA3-205ENST00000578348 CRYBG1Q9Y4K1 1723 aa14.08□□□□□ -0.16
GGA3-205ENST00000578348 HSPA2P54652 639 aa14.08□□□□□ -0.16
GGA3-205ENST00000578348 C1orf141Q5JVX7 400 aa14.08□□□□□ -0.16
GGA3-205ENST00000578348 C16orf71Q8IYS4 520 aaPredicted RBP14.08□□□□□ -0.16
GGA3-205ENST00000578348 MEIS3Q99687 375 aa14.08□□□□□ -0.16
GGA3-205ENST00000578348 ADAMTS7Q9UKP4 1686 aa14.08□□□□□ -0.16
GGA3-205ENST00000578348 COL18A1P39060 1754 aa14.08□□□□□ -0.16
GGA3-205ENST00000578348 ERBB3P21860 1342 aa14.08□□□□□ -0.16
GGA3-205ENST00000578348 PLEKHG5O94827 1062 aa14.07□□□□□ -0.16
GGA3-205ENST00000578348 TEFQ10587 303 aa14.07□□□□□ -0.16
GGA3-205ENST00000578348 LGR6Q9HBX8 967 aa14.07□□□□□ -0.16
GGA3-205ENST00000578348 AXIN2Q9Y2T1 843 aa14.07□□□□□ -0.16
GGA3-205ENST00000578348 SSFA2P28290 1259 aa14.07□□□□□ -0.16
GGA3-205ENST00000578348 SKOR2Q2VWA4 1001 aaPredicted RBP14.07□□□□□ -0.16
GGA3-205ENST00000578348 TTC22Q5TAA0 569 aa14.07□□□□□ -0.16
GGA3-205ENST00000578348 ISY1Q9ULR0 285 aaKnown RBP14.07□□□□□ -0.16
GGA3-205ENST00000578348 F6X3S4 739 aa14.06□□□□□ -0.16
GGA3-205ENST00000578348 APBB1O00213 710 aa14.06□□□□□ -0.16
GGA3-205ENST00000578348 RNMTO43148 476 aaKnown RBP14.06□□□□□ -0.16
GGA3-205ENST00000578348 EIF4A1P60842 406 aaKnown RBP14.06□□□□□ -0.16
GGA3-205ENST00000578348 FKBP5Q13451 457 aaPredicted RBP14.06□□□□□ -0.16
GGA3-205ENST00000578348 HDGFL1Q5TGJ6 251 aa14.06□□□□□ -0.16
GGA3-205ENST00000578348 SLC4A10Q6U841 1118 aa14.06□□□□□ -0.16
GGA3-205ENST00000578348 GAS2L3Q86XJ1 694 aa14.06□□□□□ -0.16
GGA3-205ENST00000578348 SIPA1L3O60292 1781 aaPredicted RBP14.06□□□□□ -0.16
GGA3-205ENST00000578348 STRCQ7RTU9 1775 aa14.06□□□□□ -0.16
GGA3-205ENST00000578348 ZC3H6P61129 1189 aaKnown RBP14.06□□□□□ -0.16
GGA3-205ENST00000578348 OTUD7AQ8TE49 926 aaPredicted RBP14.06□□□□□ -0.16
GGA3-205ENST00000578348 PLEKHG2Q9H7P9 1386 aa14.05□□□□□ -0.16
GGA3-205ENST00000578348 HMMRO75330 724 aa14.04□□□□□ -0.16
GGA3-205ENST00000578348 PTMSP20962 102 aa14.04□□□□□ -0.16
GGA3-205ENST00000578348 GNAI3P08754 354 aa14.04□□□□□ -0.16
GGA3-205ENST00000578348 CLCN1P35523 988 aa14.04□□□□□ -0.16
GGA3-205ENST00000578348 RABEP1Q15276 862 aa14.04□□□□□ -0.16
GGA3-205ENST00000578348 MPRIPQ6WCQ1 1025 aa14.04□□□□□ -0.16
GGA3-205ENST00000578348 NECTIN2Q92692 538 aa14.04□□□□□ -0.16
GGA3-205ENST00000578348 DDX17Q92841 729 aaKnown RBP14.04□□□□□ -0.16
GGA3-205ENST00000578348 SPATA31A3Q5VYP0 1347 aa14.04□□□□□ -0.16
GGA3-205ENST00000578348 BTBD11A6QL63 1104 aa14.03□□□□□ -0.16
GGA3-205ENST00000578348 GOLGA6L22H0YM25 854 aa14.03□□□□□ -0.16
GGA3-205ENST00000578348 SMARCA5O60264 1052 aaPredicted RBP14.03□□□□□ -0.16
GGA3-205ENST00000578348 GNAI2P04899 355 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms