RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 MSL1Q68DK7 614 aa15.47■□□□□ 0.07
SMARCE1-214ENST00000578112 PLEKHO1Q53GL0 409 aaPredicted RBP15.46■□□□□ 0.07
SMARCE1-214ENST00000578112 EIF4A2Q14240 407 aaKnown RBP15.46■□□□□ 0.06
SMARCE1-214ENST00000578112 NLGN1Q8N2Q7 840 aa15.46■□□□□ 0.06
SMARCE1-214ENST00000578112 C10orf71Q711Q0 1435 aa15.45■□□□□ 0.06
SMARCE1-214ENST00000578112 ATP6V1AP38606 617 aa15.45■□□□□ 0.06
SMARCE1-214ENST00000578112 ATG3Q9NT62 314 aa15.45■□□□□ 0.06
SMARCE1-214ENST00000578112 C4AP0C0L4 1744 aa15.45■□□□□ 0.06
SMARCE1-214ENST00000578112 RTCBQ9Y3I0 505 aaKnown RBP15.43■□□□□ 0.06
SMARCE1-214ENST00000578112 GNPATO15228 680 aa15.43■□□□□ 0.06
SMARCE1-214ENST00000578112 PPM1GO15355 546 aaPredicted RBP15.43■□□□□ 0.06
SMARCE1-214ENST00000578112 ITPK1Q13572 414 aa15.43■□□□□ 0.06
SMARCE1-214ENST00000578112 GPBP1L1Q9HC44 474 aaPredicted RBP15.43■□□□□ 0.06
SMARCE1-214ENST00000578112 PXDNLA1KZ92 1463 aa15.43■□□□□ 0.06
SMARCE1-214ENST00000578112 EIF4G2P78344 907 aaKnown RBP eCLIP15.42■□□□□ 0.06
SMARCE1-214ENST00000578112 TRAPPC3LQ5T215 181 aa15.42■□□□□ 0.06
SMARCE1-214ENST00000578112 RPS6KA4O75676 772 aa15.42■□□□□ 0.06
SMARCE1-214ENST00000578112 CCDC87Q9NVE4 849 aa15.42■□□□□ 0.06
SMARCE1-214ENST00000578112 ASAP1Q9ULH1 1129 aa15.42■□□□□ 0.06
SMARCE1-214ENST00000578112 ARFGEF1Q9Y6D6 1849 aa15.41■□□□□ 0.06
SMARCE1-214ENST00000578112 PHF14O94880 888 aa15.41■□□□□ 0.06
SMARCE1-214ENST00000578112 BRCA1P38398 1863 aaKnown RBP15.41■□□□□ 0.06
SMARCE1-214ENST00000578112 SCN11AQ9UI33 1791 aa15.4■□□□□ 0.06
SMARCE1-214ENST00000578112 KDM6AO15550 1401 aaPredicted RBP15.4■□□□□ 0.06
SMARCE1-214ENST00000578112 AMIGO3Q86WK7 504 aa15.39■□□□□ 0.05
SMARCE1-214ENST00000578112 MRC1P22897 1456 aa15.39■□□□□ 0.05
SMARCE1-214ENST00000578112 TJP1Q07157 1748 aa15.39■□□□□ 0.05
SMARCE1-214ENST00000578112 MMP10P09238 476 aa15.38■□□□□ 0.05
SMARCE1-214ENST00000578112 HSPA6P17066 643 aa15.38■□□□□ 0.05
SMARCE1-214ENST00000578112 CABP4P57796 275 aa15.38■□□□□ 0.05
SMARCE1-214ENST00000578112 C1orf141Q5JVX7 400 aa15.38■□□□□ 0.05
SMARCE1-214ENST00000578112 ADAMTS7Q9UKP4 1686 aa15.37■□□□□ 0.05
SMARCE1-214ENST00000578112 ZNF530Q6P9A1 599 aaPredicted RBP15.37■□□□□ 0.05
SMARCE1-214ENST00000578112 PARP3Q9Y6F1 533 aa15.36■□□□□ 0.05
SMARCE1-214ENST00000578112 PANK3Q9H999 370 aa15.36■□□□□ 0.05
SMARCE1-214ENST00000578112 RFC4P35249 363 aa15.35■□□□□ 0.05
SMARCE1-214ENST00000578112 GYS1P13807 737 aa15.35■□□□□ 0.05
SMARCE1-214ENST00000578112 MORC1Q86VD1 984 aa15.35■□□□□ 0.05
SMARCE1-214ENST00000578112 ARHGEF1Q92888 912 aaKnown RBP15.35■□□□□ 0.05
SMARCE1-214ENST00000578112 N4BP2Q86UW6 1770 aaPredicted RBP15.35■□□□□ 0.05
SMARCE1-214ENST00000578112 MTHFSP49914 203 aa15.34■□□□□ 0.05
SMARCE1-214ENST00000578112 SLC4A9Q96Q91 983 aa15.34■□□□□ 0.05
SMARCE1-214ENST00000578112 RBM42Q9BTD8 480 aaKnown RBP15.34■□□□□ 0.05
SMARCE1-214ENST00000578112 HSPA5P11021 654 aaKnown RBP15.33■□□□□ 0.04
SMARCE1-214ENST00000578112 AKAP4Q5JQC9 854 aa15.33■□□□□ 0.04
SMARCE1-214ENST00000578112 ZC3H4Q9UPT8 1303 aaKnown RBP15.33■□□□□ 0.04
SMARCE1-214ENST00000578112 KIF3CO14782 793 aa15.33■□□□□ 0.04
SMARCE1-214ENST00000578112 IFFO2Q5TF58 517 aa15.33■□□□□ 0.04
SMARCE1-214ENST00000578112 MYH14Q7Z406 1995 aaKnown RBP15.33■□□□□ 0.04
SMARCE1-214ENST00000578112 NRXN2Q9P2S2 1712 aa15.32■□□□□ 0.04
SMARCE1-214ENST00000578112 USP42Q9H9J4 1324 aaKnown RBP15.32■□□□□ 0.04
SMARCE1-214ENST00000578112 KNSTRNQ9Y448 316 aa15.32■□□□□ 0.04
SMARCE1-214ENST00000578112 IL13P35225 146 aa15.32■□□□□ 0.04
SMARCE1-214ENST00000578112 APLP1P51693 650 aa15.32■□□□□ 0.04
SMARCE1-214ENST00000578112 TNRC6CQ9HCJ0 1690 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-214ENST00000578112 VSIG10Q8N0Z9 540 aa15.31■□□□□ 0.04
SMARCE1-214ENST00000578112 DLEC1Q9Y238 1755 aa15.31■□□□□ 0.04
SMARCE1-214ENST00000578112 TOMM70O94826 608 aa15.3■□□□□ 0.04
SMARCE1-214ENST00000578112 CRKLP46109 303 aaKnown RBP15.3■□□□□ 0.04
SMARCE1-214ENST00000578112 UBR2Q8IWV8 1755 aa15.3■□□□□ 0.04
SMARCE1-214ENST00000578112 NPC1L1Q9UHC9 1359 aa15.3■□□□□ 0.04
SMARCE1-214ENST00000578112 VIRMAQ69YN4 1812 aaKnown RBP15.29■□□□□ 0.04
SMARCE1-214ENST00000578112 PIM2Q9P1W9 311 aa15.29■□□□□ 0.04
SMARCE1-214ENST00000578112 RBM46Q8TBY0 533 aaKnown RBP15.29■□□□□ 0.04
SMARCE1-214ENST00000578112 PDZRN3Q9UPQ7 1066 aa15.29■□□□□ 0.04
SMARCE1-214ENST00000578112 DPEP1P16444 411 aa15.28■□□□□ 0.04
SMARCE1-214ENST00000578112 TNNT2P45379 298 aaPredicted RBP15.28■□□□□ 0.04
SMARCE1-214ENST00000578112 SLC52A2Q9HAB3 445 aa15.28■□□□□ 0.04
SMARCE1-214ENST00000578112 BCS1LQ9Y276 419 aa15.28■□□□□ 0.04
SMARCE1-214ENST00000578112 SULT6B1Q6IMI4 303 aa15.28■□□□□ 0.04
SMARCE1-214ENST00000578112 KCPQ6ZWJ8 1503 aa15.27■□□□□ 0.04
SMARCE1-214ENST00000578112 FCHSD2O94868 740 aa15.27■□□□□ 0.04
SMARCE1-214ENST00000578112 POLR3GLQ9BT43 218 aa15.27■□□□□ 0.04
SMARCE1-214ENST00000578112 SOS1Q07889 1333 aaPredicted RBP15.27■□□□□ 0.04
SMARCE1-214ENST00000578112 TM4SF1P30408 202 aa15.27■□□□□ 0.03
SMARCE1-214ENST00000578112 FSTL1Q12841 308 aa15.27■□□□□ 0.03
SMARCE1-214ENST00000578112 DALRD3Q5D0E6 543 aaKnown RBP15.27■□□□□ 0.03
SMARCE1-214ENST00000578112 NFATC2IPQ8NCF5 419 aa15.27■□□□□ 0.03
SMARCE1-214ENST00000578112 KCNA3P22001 575 aa15.26■□□□□ 0.03
SMARCE1-214ENST00000578112 AMER1Q5JTC6 1135 aaPredicted RBP15.26■□□□□ 0.03
SMARCE1-214ENST00000578112 SMIM5Q71RC9 77 aa15.26■□□□□ 0.03
SMARCE1-214ENST00000578112 KDM2BQ8NHM5 1336 aa15.26■□□□□ 0.03
SMARCE1-214ENST00000578112 A0A0G2JLW4 131 aa15.26■□□□□ 0.03
SMARCE1-214ENST00000578112 INTS5Q6P9B9 1019 aaKnown RBP15.26■□□□□ 0.03
SMARCE1-214ENST00000578112 ARHGAP27Q6ZUM4 889 aa15.26■□□□□ 0.03
SMARCE1-214ENST00000578112 AEBP1Q8IUX7 1158 aa15.25■□□□□ 0.03
SMARCE1-214ENST00000578112 WDR90Q96KV7 1748 aa15.25■□□□□ 0.03
SMARCE1-214ENST00000578112 A0A087WZG4 1122 aa15.25■□□□□ 0.03
SMARCE1-214ENST00000578112 RNMTO43148 476 aaKnown RBP15.25■□□□□ 0.03
SMARCE1-214ENST00000578112 ZPR1O75312 459 aa15.25■□□□□ 0.03
SMARCE1-214ENST00000578112 NARFQ9UHQ1 456 aa15.25■□□□□ 0.03
SMARCE1-214ENST00000578112 POLRMTO00411 1230 aaKnown RBP15.24■□□□□ 0.03
SMARCE1-214ENST00000578112 AFDNP55196 1824 aaKnown RBP15.23■□□□□ 0.03
SMARCE1-214ENST00000578112 PTCD1O75127 700 aaKnown RBP15.23■□□□□ 0.03
SMARCE1-214ENST00000578112 TEX13AQ9BXU3 409 aaPredicted RBP15.23■□□□□ 0.03
SMARCE1-214ENST00000578112 COL15A1P39059 1388 aa15.23■□□□□ 0.03
SMARCE1-214ENST00000578112 CYP19A1P11511 503 aaPredicted RBP15.22■□□□□ 0.03
SMARCE1-214ENST00000578112 DDR1Q08345 913 aa15.22■□□□□ 0.03
SMARCE1-214ENST00000578112 ZNF526Q8TF50 670 aaPredicted RBP15.22■□□□□ 0.03
SMARCE1-214ENST00000578112 SBF1O95248 1867 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms