RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 SHPRHQ149N8 1683 aa8.67□□□□□ -1.02
KRT39-203ENST00000578078 NLRP1Q9C000 1473 aa8.67□□□□□ -1.02
KRT39-203ENST00000578078 LETM1O95202 739 aaPredicted RBP8.66□□□□□ -1.02
KRT39-203ENST00000578078 RGS3P49796 1198 aa8.66□□□□□ -1.02
KRT39-203ENST00000578078 POLR3AO14802 1390 aaPredicted RBP8.66□□□□□ -1.02
KRT39-203ENST00000578078 DYNC1I1O14576 645 aa8.65□□□□□ -1.02
KRT39-203ENST00000578078 C8orf34Q49A92 452 aa8.65□□□□□ -1.02
KRT39-203ENST00000578078 TMC2Q8TDI7 906 aa8.65□□□□□ -1.02
KRT39-203ENST00000578078 RBM42Q9BTD8 480 aaKnown RBP8.65□□□□□ -1.02
KRT39-203ENST00000578078 TBC1D2Q9BYX2 928 aa8.65□□□□□ -1.02
KRT39-203ENST00000578078 PPP1R12CQ9BZL4 782 aa8.65□□□□□ -1.02
KRT39-203ENST00000578078 TERF2IPQ9NYB0 399 aa8.65□□□□□ -1.02
KRT39-203ENST00000578078 CPS1P31327 1500 aa8.65□□□□□ -1.02
KRT39-203ENST00000578078 PLPP6Q8IY26 295 aa8.65□□□□□ -1.03
KRT39-203ENST00000578078 EXOC6Q8TAG9 804 aa8.65□□□□□ -1.03
KRT39-203ENST00000578078 ANP32BQ92688 251 aaKnown RBP8.65□□□□□ -1.03
KRT39-203ENST00000578078 NAP1L2Q9ULW6 460 aaPredicted RBP8.65□□□□□ -1.03
KRT39-203ENST00000578078 A0A1W2PP64 1363 aa8.65□□□□□ -1.03
KRT39-203ENST00000578078 ABCC11Q96J66 1382 aa8.65□□□□□ -1.03
KRT39-203ENST00000578078 TMEM2Q9UHN6 1383 aa8.65□□□□□ -1.03
KRT39-203ENST00000578078 DDX11L8A8MPP1 907 aa8.64□□□□□ -1.03
KRT39-203ENST00000578078 ERCC3P19447 782 aa8.64□□□□□ -1.03
KRT39-203ENST00000578078 GTF2E1P29083 439 aaPredicted RBP8.64□□□□□ -1.03
KRT39-203ENST00000578078 DIXDC1Q155Q3 683 aa8.64□□□□□ -1.03
KRT39-203ENST00000578078 CHADLQ6NUI6 762 aa8.64□□□□□ -1.03
KRT39-203ENST00000578078 KIAA1211Q6ZU35 1233 aa8.64□□□□□ -1.03
KRT39-203ENST00000578078 CFAP53Q96M91 514 aa8.64□□□□□ -1.03
KRT39-203ENST00000578078 ANTXR1Q9H6X2 564 aa8.64□□□□□ -1.03
KRT39-203ENST00000578078 IBTKQ9P2D0 1353 aaPredicted RBP8.64□□□□□ -1.03
KRT39-203ENST00000578078 ITSN1Q15811 1721 aa8.64□□□□□ -1.03
KRT39-203ENST00000578078 MED14O60244 1454 aa8.63□□□□□ -1.03
KRT39-203ENST00000578078 ATP7BP35670 1465 aa8.63□□□□□ -1.03
KRT39-203ENST00000578078 SLC20A2Q08357 652 aa8.63□□□□□ -1.03
KRT39-203ENST00000578078 CCDC173Q0VFZ6 552 aa8.63□□□□□ -1.03
KRT39-203ENST00000578078 HDGFL2Q7Z4V5 671 aaPredicted RBP8.63□□□□□ -1.03
KRT39-203ENST00000578078 ZSCAN30Q86W11 494 aa8.63□□□□□ -1.03
KRT39-203ENST00000578078 NGEFQ8N5V2 710 aa8.63□□□□□ -1.03
KRT39-203ENST00000578078 LIMD1Q9UGP4 676 aa8.63□□□□□ -1.03
KRT39-203ENST00000578078 FAM135BQ49AJ0 1406 aa8.63□□□□□ -1.03
KRT39-203ENST00000578078 PITPNM1O00562 1244 aa8.62□□□□□ -1.03
KRT39-203ENST00000578078 MCM5P33992 734 aa8.62□□□□□ -1.03
KRT39-203ENST00000578078 CSPP1Q1MSJ5 1256 aa8.62□□□□□ -1.03
KRT39-203ENST00000578078 PPP1R9BQ96SB3 815 aa8.62□□□□□ -1.03
KRT39-203ENST00000578078 CDK19Q9BWU1 502 aa8.62□□□□□ -1.03
KRT39-203ENST00000578078 GRPEL1Q9HAV7 217 aa8.62□□□□□ -1.03
KRT39-203ENST00000578078 TECPR2O15040 1411 aa8.62□□□□□ -1.03
KRT39-203ENST00000578078 ATG7O95352 703 aa8.62□□□□□ -1.03
KRT39-203ENST00000578078 CD163L1Q9NR16 1453 aa8.61□□□□□ -1.03
KRT39-203ENST00000578078 AKAP12Q02952 1782 aa8.61□□□□□ -1.03
KRT39-203ENST00000578078 METP08581 1390 aa8.61□□□□□ -1.03
KRT39-203ENST00000578078 PLEKHG1Q9ULL1 1385 aa8.61□□□□□ -1.03
KRT39-203ENST00000578078 PLEKHH1Q9ULM0 1364 aa8.61□□□□□ -1.03
KRT39-203ENST00000578078 SKOR2Q2VWA4 1001 aaPredicted RBP8.61□□□□□ -1.03
KRT39-203ENST00000578078 DNAJC14Q6Y2X3 702 aaPredicted RBP8.61□□□□□ -1.03
KRT39-203ENST00000578078 ILDR1Q86SU0 546 aaPredicted RBP8.61□□□□□ -1.03
KRT39-203ENST00000578078 SIRT1Q96EB6 747 aa8.61□□□□□ -1.03
KRT39-203ENST00000578078 CDCA7LQ96GN5 454 aa8.61□□□□□ -1.03
KRT39-203ENST00000578078 DRC1Q96MC2 740 aa8.61□□□□□ -1.03
KRT39-203ENST00000578078 NPDC1Q9NQX5 325 aaPredicted RBP8.61□□□□□ -1.03
KRT39-203ENST00000578078 SLIT1O75093 1534 aa8.6□□□□□ -1.03
KRT39-203ENST00000578078 MON2Q7Z3U7 1717 aa8.6□□□□□ -1.03
KRT39-203ENST00000578078 ADGRB2O60241 1585 aa8.6□□□□□ -1.03
KRT39-203ENST00000578078 DIP2AQ14689 1571 aa8.6□□□□□ -1.03
KRT39-203ENST00000578078 PALM3A6NDB9 673 aaPredicted RBP8.6□□□□□ -1.03
KRT39-203ENST00000578078 ZNF500O60304 480 aaPredicted RBP8.6□□□□□ -1.03
KRT39-203ENST00000578078 TCF3P15923 654 aa8.6□□□□□ -1.03
KRT39-203ENST00000578078 MCM4P33991 863 aa8.6□□□□□ -1.03
KRT39-203ENST00000578078 CCDC146Q8IYE0 955 aa8.6□□□□□ -1.03
KRT39-203ENST00000578078 CCDC94Q9BW85 323 aaPredicted RBP8.6□□□□□ -1.03
KRT39-203ENST00000578078 MAPK8IP3Q9UPT6 1336 aa8.6□□□□□ -1.03
KRT39-203ENST00000578078 MTHFSP49914 203 aa8.59□□□□□ -1.03
KRT39-203ENST00000578078 TUSC1Q2TAM9 212 aa8.59□□□□□ -1.03
KRT39-203ENST00000578078 WAPLQ7Z5K2 1190 aa8.59□□□□□ -1.03
KRT39-203ENST00000578078 C8orf37Q96NL8 207 aa8.59□□□□□ -1.03
KRT39-203ENST00000578078 EID1Q9Y6B2 187 aa8.59□□□□□ -1.03
KRT39-203ENST00000578078 ZNF521Q96K83 1311 aa8.59□□□□□ -1.03
KRT39-203ENST00000578078 CDC42BPGQ6DT37 1551 aa8.59□□□□□ -1.03
KRT39-203ENST00000578078 RIMS1Q86UR5 1692 aaKnown RBP8.59□□□□□ -1.03
KRT39-203ENST00000578078 ARHGAP23Q9P227 1491 aa8.59□□□□□ -1.03
KRT39-203ENST00000578078 APAF1O14727 1248 aa8.59□□□□□ -1.03
KRT39-203ENST00000578078 ZNF16P17020 682 aaPredicted RBP8.59□□□□□ -1.03
KRT39-203ENST00000578078 RIPK4P57078 832 aa8.59□□□□□ -1.03
KRT39-203ENST00000578078 WASHC4Q2M389 1173 aa8.59□□□□□ -1.03
KRT39-203ENST00000578078 SREK1Q8WXA9 508 aaKnown RBP8.59□□□□□ -1.03
KRT39-203ENST00000578078 SPATA32Q96LK8 384 aa8.59□□□□□ -1.03
KRT39-203ENST00000578078 CABP1Q9NZU7 370 aa8.59□□□□□ -1.03
KRT39-203ENST00000578078 PPIP5K1Q6PFW1 1433 aa8.58□□□□□ -1.04
KRT39-203ENST00000578078 ADAMTS13Q76LX8 1427 aa8.58□□□□□ -1.04
KRT39-203ENST00000578078 IQSEC2Q5JU85 1478 aa8.58□□□□□ -1.04
KRT39-203ENST00000578078 WASLO00401 505 aaPredicted RBP8.58□□□□□ -1.04
KRT39-203ENST00000578078 ZSCAN20P17040 1043 aaPredicted RBP8.58□□□□□ -1.04
KRT39-203ENST00000578078 MSNP26038 577 aaKnown RBP8.58□□□□□ -1.04
KRT39-203ENST00000578078 LMOD1P29536 600 aaPredicted RBP8.58□□□□□ -1.04
KRT39-203ENST00000578078 RUNDC1Q96C34 613 aa8.58□□□□□ -1.04
KRT39-203ENST00000578078 TOPAZ1Q8N9V7 1692 aa8.58□□□□□ -1.04
KRT39-203ENST00000578078 NKTRP30414 1462 aaKnown RBP8.57□□□□□ -1.04
KRT39-203ENST00000578078 MAP2P11137 1827 aaKnown RBP8.57□□□□□ -1.04
KRT39-203ENST00000578078 SMARCA5O60264 1052 aaPredicted RBP8.57□□□□□ -1.04
KRT39-203ENST00000578078 CEBPAP49715 358 aaPredicted RBP8.57□□□□□ -1.04
KRT39-203ENST00000578078 PPP4R3BQ5MIZ7 849 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms