RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 NFAT5O94916 1531 aa13.37□□□□□ -0.27
CRLF3-202ENST00000577725 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
CRLF3-202ENST00000577725 KCNQ4P56696 695 aa13.36□□□□□ -0.27
CRLF3-202ENST00000577725 MLLT1Q03111 559 aaPredicted RBP13.36□□□□□ -0.27
CRLF3-202ENST00000577725 LTN1O94822 1766 aa13.35□□□□□ -0.27
CRLF3-202ENST00000577725 SLIT3O75094 1523 aa13.35□□□□□ -0.27
CRLF3-202ENST00000577725 TUBGCP6Q96RT7 1819 aa13.35□□□□□ -0.27
CRLF3-202ENST00000577725 DIAPH1O60610 1272 aaKnown RBP13.35□□□□□ -0.27
CRLF3-202ENST00000577725 U2AF1L5P0DN76 240 aaPredicted RBP13.35□□□□□ -0.27
CRLF3-202ENST00000577725 U2AF1Q01081 240 aaKnown RBP eCLIP13.35□□□□□ -0.27
CRLF3-202ENST00000577725 SMC1BQ8NDV3 1235 aa13.35□□□□□ -0.27
CRLF3-202ENST00000577725 INSRP06213 1382 aa13.34□□□□□ -0.27
CRLF3-202ENST00000577725 AMPHP49418 695 aa13.34□□□□□ -0.27
CRLF3-202ENST00000577725 PRDM10Q9NQV6 1147 aa13.34□□□□□ -0.27
CRLF3-202ENST00000577725 C10orf71Q711Q0 1435 aa13.33□□□□□ -0.28
CRLF3-202ENST00000577725 IL13P35225 146 aa13.33□□□□□ -0.28
CRLF3-202ENST00000577725 HSP90AB2PQ58FF8 381 aa13.33□□□□□ -0.28
CRLF3-202ENST00000577725 NUDCQ9Y266 331 aa13.33□□□□□ -0.28
CRLF3-202ENST00000577725 EIF4A2Q14240 407 aaKnown RBP13.32□□□□□ -0.28
CRLF3-202ENST00000577725 ZBED9Q6R2W3 1325 aa13.32□□□□□ -0.28
CRLF3-202ENST00000577725 KDM2BQ8NHM5 1336 aa13.32□□□□□ -0.28
CRLF3-202ENST00000577725 COL18A1P39060 1754 aa13.32□□□□□ -0.28
CRLF3-202ENST00000577725 PLEKHG2Q9H7P9 1386 aa13.32□□□□□ -0.28
CRLF3-202ENST00000577725 LTV1Q96GA3 475 aaPredicted RBP13.31□□□□□ -0.28
CRLF3-202ENST00000577725 FLT4P35916 1363 aa13.31□□□□□ -0.28
CRLF3-202ENST00000577725 HMOX1P09601 288 aa13.3□□□□□ -0.28
CRLF3-202ENST00000577725 HOXC9P31274 260 aa13.3□□□□□ -0.28
CRLF3-202ENST00000577725 KCNH5Q8NCM2 988 aa13.3□□□□□ -0.28
CRLF3-202ENST00000577725 FLAD1Q8NFF5 587 aa13.3□□□□□ -0.28
CRLF3-202ENST00000577725 ABHD8Q96I13 439 aa13.3□□□□□ -0.28
CRLF3-202ENST00000577725 CCNL1Q9UK58 526 aaPredicted RBP13.3□□□□□ -0.28
CRLF3-202ENST00000577725 APAF1O14727 1248 aa13.29□□□□□ -0.28
CRLF3-202ENST00000577725 FOXN1O15353 648 aa13.29□□□□□ -0.28
CRLF3-202ENST00000577725 ARHGEF25Q86VW2 580 aa13.29□□□□□ -0.28
CRLF3-202ENST00000577725 RUNDC1Q96C34 613 aa13.29□□□□□ -0.28
CRLF3-202ENST00000577725 RRP7AQ9Y3A4 280 aaKnown RBP13.29□□□□□ -0.28
CRLF3-202ENST00000577725 RGPD5Q99666 1765 aa13.28□□□□□ -0.28
CRLF3-202ENST00000577725 IL2RBP14784 551 aa13.28□□□□□ -0.28
CRLF3-202ENST00000577725 RGS19P49795 217 aa13.28□□□□□ -0.28
CRLF3-202ENST00000577725 ARHGAP27Q6ZUM4 889 aa13.28□□□□□ -0.28
CRLF3-202ENST00000577725 RRAGCQ9HB90 399 aa13.28□□□□□ -0.28
CRLF3-202ENST00000577725 RTL1A6NKG5 1358 aa13.28□□□□□ -0.28
CRLF3-202ENST00000577725 AEBP1Q8IUX7 1158 aa13.27□□□□□ -0.29
CRLF3-202ENST00000577725 IP6K1Q92551 441 aa13.27□□□□□ -0.29
CRLF3-202ENST00000577725 RSPH6AQ9H0K4 717 aa13.27□□□□□ -0.29
CRLF3-202ENST00000577725 PXDNLA1KZ92 1463 aa13.27□□□□□ -0.29
CRLF3-202ENST00000577725 KCPQ6ZWJ8 1503 aa13.27□□□□□ -0.29
CRLF3-202ENST00000577725 RGPD2P0DJD1 1756 aa13.26□□□□□ -0.29
CRLF3-202ENST00000577725 PRKAR2BP31323 418 aa13.26□□□□□ -0.29
CRLF3-202ENST00000577725 CTCFP49711 727 aaPredicted RBP13.26□□□□□ -0.29
CRLF3-202ENST00000577725 NEUROD2Q15784 382 aa13.26□□□□□ -0.29
CRLF3-202ENST00000577725 C9orf131Q5VYM1 1079 aa13.26□□□□□ -0.29
CRLF3-202ENST00000577725 SYTL4Q96C24 671 aaPredicted RBP13.26□□□□□ -0.29
CRLF3-202ENST00000577725 PLEKHF1Q96S99 279 aa13.26□□□□□ -0.29
CRLF3-202ENST00000577725 BCS1LQ9Y276 419 aa13.26□□□□□ -0.29
CRLF3-202ENST00000577725 KIF24Q5T7B8 1368 aa13.24□□□□□ -0.29
CRLF3-202ENST00000577725 HMGB2P26583 209 aaKnown RBP13.24□□□□□ -0.29
CRLF3-202ENST00000577725 SULT6B1Q6IMI4 303 aa13.24□□□□□ -0.29
CRLF3-202ENST00000577725 USHBP1Q8N6Y0 703 aa13.24□□□□□ -0.29
CRLF3-202ENST00000577725 EYA1Q99502 592 aa13.24□□□□□ -0.29
CRLF3-202ENST00000577725 MAPK8IP3Q9UPT6 1336 aa13.23□□□□□ -0.29
CRLF3-202ENST00000577725 PRIM1P49642 420 aaKnown RBP13.23□□□□□ -0.29
CRLF3-202ENST00000577725 AIDAQ96BJ3 306 aa13.23□□□□□ -0.29
CRLF3-202ENST00000577725 CDCA7LQ96GN5 454 aa13.23□□□□□ -0.29
CRLF3-202ENST00000577725 PHACTR3Q96KR7 559 aa13.23□□□□□ -0.29
CRLF3-202ENST00000577725 NLRP2Q9NX02 1062 aa13.23□□□□□ -0.29
CRLF3-202ENST00000577725 LY75O60449 1722 aa13.22□□□□□ -0.29
CRLF3-202ENST00000577725 FCHSD2O94868 740 aa13.22□□□□□ -0.29
CRLF3-202ENST00000577725 DDX54Q8TDD1 881 aaKnown RBP13.22□□□□□ -0.29
CRLF3-202ENST00000577725 ANKRD24Q8TF21 1146 aa13.22□□□□□ -0.29
CRLF3-202ENST00000577725 TMPOP42166 694 aaKnown RBP13.21□□□□□ -0.29
CRLF3-202ENST00000577725 TGFB2P61812 414 aa13.21□□□□□ -0.29
CRLF3-202ENST00000577725 ERBB3P21860 1342 aa13.2□□□□□ -0.3
CRLF3-202ENST00000577725 ZNF521Q96K83 1311 aa13.2□□□□□ -0.3
CRLF3-202ENST00000577725 CCDC85CA6NKD9 419 aa13.2□□□□□ -0.3
CRLF3-202ENST00000577725 MKRN1Q9UHC7 482 aaKnown RBP13.2□□□□□ -0.3
CRLF3-202ENST00000577725 TNRC6CQ9HCJ0 1690 aaKnown RBP13.2□□□□□ -0.3
CRLF3-202ENST00000577725 NBPF6Q5VWK0 638 aa13.19□□□□□ -0.3
CRLF3-202ENST00000577725 NBPF4Q96M43 638 aa13.19□□□□□ -0.3
CRLF3-202ENST00000577725 PNNQ9H307 717 aaKnown RBP13.19□□□□□ -0.3
CRLF3-202ENST00000577725 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
CRLF3-202ENST00000577725 DLG5Q8TDM6 1919 aa13.19□□□□□ -0.3
CRLF3-202ENST00000577725 NEFMP07197 916 aa13.18□□□□□ -0.3
CRLF3-202ENST00000577725 LBX1P52954 281 aa13.18□□□□□ -0.3
CRLF3-202ENST00000577725 NFE2L2Q16236 605 aa13.18□□□□□ -0.3
CRLF3-202ENST00000577725 RNF181Q9P0P0 153 aa13.18□□□□□ -0.3
CRLF3-202ENST00000577725 A0A0G2JLW4 131 aa13.17□□□□□ -0.3
CRLF3-202ENST00000577725 VEGFAP15692 232 aaPredicted RBP13.17□□□□□ -0.3
CRLF3-202ENST00000577725 RIPK4P57078 832 aa13.17□□□□□ -0.3
CRLF3-202ENST00000577725 WWC1Q8IX03 1113 aa13.17□□□□□ -0.3
CRLF3-202ENST00000577725 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
CRLF3-202ENST00000577725 TRIM35Q9UPQ4 493 aa13.17□□□□□ -0.3
CRLF3-202ENST00000577725 AK7Q96M32 723 aa13.16□□□□□ -0.3
CRLF3-202ENST00000577725 KDRP35968 1356 aa13.16□□□□□ -0.3
CRLF3-202ENST00000577725 PKD1L3Q7Z443 1732 aa13.16□□□□□ -0.3
CRLF3-202ENST00000577725 PHF14O94880 888 aa13.15□□□□□ -0.3
CRLF3-202ENST00000577725 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
CRLF3-202ENST00000577725 THUMPD2Q9BTF0 503 aaKnown RBP13.15□□□□□ -0.3
CRLF3-202ENST00000577725 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.14□□□□□ -0.31
CRLF3-202ENST00000577725 SLFN5Q08AF3 891 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms