RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 SMC5Q8IY18 1101 aa12.9□□□□□ -0.34
RNF43-203ENST00000577716 NOL10Q9BSC4 688 aaKnown RBP12.9□□□□□ -0.34
RNF43-203ENST00000577716 BOLA2Q9H3K6 86 aa12.9□□□□□ -0.34
RNF43-203ENST00000577716 LIMCH1Q9UPQ0 1083 aa12.9□□□□□ -0.34
RNF43-203ENST00000577716 CAMK4Q16566 473 aa12.9□□□□□ -0.35
RNF43-203ENST00000577716 RRP12Q5JTH9 1297 aaKnown RBP12.9□□□□□ -0.35
RNF43-203ENST00000577716 DENND4BO75064 1496 aaPredicted RBP12.89□□□□□ -0.35
RNF43-203ENST00000577716 RBM27Q9P2N5 1060 aaKnown RBP12.89□□□□□ -0.35
RNF43-203ENST00000577716 GCC2Q8IWJ2 1684 aa12.89□□□□□ -0.35
RNF43-203ENST00000577716 FAM177BA6PVY3 158 aa12.89□□□□□ -0.35
RNF43-203ENST00000577716 COL17A1Q9UMD9 1497 aaPredicted RBP12.89□□□□□ -0.35
RNF43-203ENST00000577716 FKBP4Q02790 459 aaKnown RBP eCLIP12.89□□□□□ -0.35
RNF43-203ENST00000577716 TTC39AQ5SRH9 613 aa12.89□□□□□ -0.35
RNF43-203ENST00000577716 CEP57L1Q8IYX8 460 aa12.89□□□□□ -0.35
RNF43-203ENST00000577716 USHBP1Q8N6Y0 703 aa12.89□□□□□ -0.35
RNF43-203ENST00000577716 SPG7Q9UQ90 795 aa12.89□□□□□ -0.35
RNF43-203ENST00000577716 SERPINC1P01008 464 aa12.88□□□□□ -0.35
RNF43-203ENST00000577716 CABP4P57796 275 aa12.88□□□□□ -0.35
RNF43-203ENST00000577716 C8orf58Q8NAV2 365 aa12.88□□□□□ -0.35
RNF43-203ENST00000577716 DNAAF4Q8WXU2 420 aa12.88□□□□□ -0.35
RNF43-203ENST00000577716 SNX21Q969T3 373 aa12.88□□□□□ -0.35
RNF43-203ENST00000577716 SH2B1Q9NRF2 756 aaPredicted RBP12.88□□□□□ -0.35
RNF43-203ENST00000577716 CEP126Q9P2H0 1117 aa12.88□□□□□ -0.35
RNF43-203ENST00000577716 KDM2BQ8NHM5 1336 aa12.88□□□□□ -0.35
RNF43-203ENST00000577716 ZBTB40Q9NUA8 1239 aa12.88□□□□□ -0.35
RNF43-203ENST00000577716 WDR7Q9Y4E6 1490 aa12.88□□□□□ -0.35
RNF43-203ENST00000577716 TTLL5Q6EMB2 1281 aa12.88□□□□□ -0.35
RNF43-203ENST00000577716 ANKRD44Q8N8A2 993 aa12.88□□□□□ -0.35
RNF43-203ENST00000577716 BRMS1Q9HCU9 246 aa12.88□□□□□ -0.35
RNF43-203ENST00000577716 HSP90B2PQ58FF3 399 aa12.87□□□□□ -0.35
RNF43-203ENST00000577716 CEP89Q96ST8 783 aa12.87□□□□□ -0.35
RNF43-203ENST00000577716 SCAND2PQ9GZW5 306 aaPredicted RBP12.87□□□□□ -0.35
RNF43-203ENST00000577716 CNNM1Q9NRU3 951 aa12.87□□□□□ -0.35
RNF43-203ENST00000577716 TMX3Q96JJ7 454 aa12.87□□□□□ -0.35
RNF43-203ENST00000577716 CCDC8Q9H0W5 538 aaPredicted RBP12.87□□□□□ -0.35
RNF43-203ENST00000577716 DMRT2Q9Y5R5 561 aa12.87□□□□□ -0.35
RNF43-203ENST00000577716 RAD21O60216 631 aa12.87□□□□□ -0.35
RNF43-203ENST00000577716 CLCN1P35523 988 aa12.87□□□□□ -0.35
RNF43-203ENST00000577716 MRPL50Q8N5N7 158 aaKnown RBP12.87□□□□□ -0.35
RNF43-203ENST00000577716 TSPYL6Q8N831 410 aa12.86□□□□□ -0.35
RNF43-203ENST00000577716 ZC3H6P61129 1189 aaKnown RBP12.86□□□□□ -0.35
RNF43-203ENST00000577716 CCDC57Q2TAC2 916 aa12.86□□□□□ -0.35
RNF43-203ENST00000577716 C16orf71Q8IYS4 520 aaPredicted RBP12.86□□□□□ -0.35
RNF43-203ENST00000577716 VAMP4O75379 141 aa12.86□□□□□ -0.35
RNF43-203ENST00000577716 STK11IPQ8N1F8 1099 aa12.86□□□□□ -0.35
RNF43-203ENST00000577716 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.86□□□□□ -0.35
RNF43-203ENST00000577716 ABCC2Q92887 1545 aa12.86□□□□□ -0.35
RNF43-203ENST00000577716 CCP110O43303 1012 aa12.85□□□□□ -0.35
RNF43-203ENST00000577716 BRPF1P55201 1214 aaPredicted RBP12.85□□□□□ -0.35
RNF43-203ENST00000577716 ZSCAN23Q3MJ62 389 aa12.85□□□□□ -0.35
RNF43-203ENST00000577716 PPP1R42Q7Z4L9 355 aa12.85□□□□□ -0.35
RNF43-203ENST00000577716 POLKQ9UBT6 870 aa12.85□□□□□ -0.35
RNF43-203ENST00000577716 PDE1AP54750 535 aa12.85□□□□□ -0.35
RNF43-203ENST00000577716 HSP90AB2PQ58FF8 381 aa12.85□□□□□ -0.35
RNF43-203ENST00000577716 KIF6Q6ZMV9 814 aa12.85□□□□□ -0.35
RNF43-203ENST00000577716 MTMR7Q9Y216 660 aa12.85□□□□□ -0.35
RNF43-203ENST00000577716 STX6O43752 255 aa12.85□□□□□ -0.35
RNF43-203ENST00000577716 ECHDC1Q9NTX5 307 aa12.85□□□□□ -0.35
RNF43-203ENST00000577716 CTNNA3Q9UI47 895 aa12.85□□□□□ -0.35
RNF43-203ENST00000577716 FILIP1LQ4L180 1135 aa12.85□□□□□ -0.35
RNF43-203ENST00000577716 LARP1Q6PKG0 1096 aaKnown RBP12.85□□□□□ -0.35
RNF43-203ENST00000577716 PKNOX2Q96KN3 472 aa12.85□□□□□ -0.35
RNF43-203ENST00000577716 CKAP2LQ8IYA6 745 aa12.84□□□□□ -0.35
RNF43-203ENST00000577716 MPRIPQ6WCQ1 1025 aa12.84□□□□□ -0.35
RNF43-203ENST00000577716 TRIM22Q8IYM9 498 aa12.84□□□□□ -0.35
RNF43-203ENST00000577716 FAM177A1Q8N128 213 aaPredicted RBP12.84□□□□□ -0.35
RNF43-203ENST00000577716 ACBD3Q9H3P7 528 aa12.84□□□□□ -0.35
RNF43-203ENST00000577716 TFIP11Q9UBB9 837 aaKnown RBP12.84□□□□□ -0.35
RNF43-203ENST00000577716 TTC21BQ7Z4L5 1316 aa12.84□□□□□ -0.35
RNF43-203ENST00000577716 DBF4Q9UBU7 674 aaPredicted RBP12.84□□□□□ -0.35
RNF43-203ENST00000577716 MBD5Q9P267 1494 aa12.84□□□□□ -0.35
RNF43-203ENST00000577716 PI4KAP2A4QPH2 592 aa12.83□□□□□ -0.35
RNF43-203ENST00000577716 PI4KAP1Q8N8J0 262 aa12.83□□□□□ -0.35
RNF43-203ENST00000577716 KCNH5Q8NCM2 988 aa12.83□□□□□ -0.35
RNF43-203ENST00000577716 ABCC10Q5T3U5 1492 aa12.83□□□□□ -0.36
RNF43-203ENST00000577716 PDCL2Q8N4E4 241 aa12.83□□□□□ -0.36
RNF43-203ENST00000577716 CCDC85AQ96PX6 553 aaPredicted RBP12.83□□□□□ -0.36
RNF43-203ENST00000577716 STRN4Q9NRL3 753 aa12.83□□□□□ -0.36
RNF43-203ENST00000577716 EIF2AK4Q9P2K8 1649 aaKnown RBP12.83□□□□□ -0.36
RNF43-203ENST00000577716 ZNF518AQ6AHZ1 1483 aa12.83□□□□□ -0.36
RNF43-203ENST00000577716 AMOTL2Q9Y2J4 779 aa12.83□□□□□ -0.36
RNF43-203ENST00000577716 HCLS1P14317 486 aaPredicted RBP12.83□□□□□ -0.36
RNF43-203ENST00000577716 DHX8Q14562 1220 aaKnown RBP12.83□□□□□ -0.36
RNF43-203ENST00000577716 RAB3GAP1Q15042 981 aa12.83□□□□□ -0.36
RNF43-203ENST00000577716 PHACTR3Q96KR7 559 aa12.83□□□□□ -0.36
RNF43-203ENST00000577716 DCTPP1Q9H773 170 aa12.83□□□□□ -0.36
RNF43-203ENST00000577716 ANXA1P04083 346 aa12.82□□□□□ -0.36
RNF43-203ENST00000577716 NAP1L1P55209 391 aaKnown RBP12.82□□□□□ -0.36
RNF43-203ENST00000577716 TOM1L2Q6ZVM7 507 aa12.82□□□□□ -0.36
RNF43-203ENST00000577716 NPC1L1Q9UHC9 1359 aa12.82□□□□□ -0.36
RNF43-203ENST00000577716 ACEP12821 1306 aa12.82□□□□□ -0.36
RNF43-203ENST00000577716 GJB2P29033 226 aa12.82□□□□□ -0.36
RNF43-203ENST00000577716 PUS7Q96PZ0 661 aaKnown RBP12.82□□□□□ -0.36
RNF43-203ENST00000577716 ADCY5O95622 1261 aa12.82□□□□□ -0.36
RNF43-203ENST00000577716 CEBPAP49715 358 aaPredicted RBP12.82□□□□□ -0.36
RNF43-203ENST00000577716 LRSAM1Q6UWE0 723 aa12.82□□□□□ -0.36
RNF43-203ENST00000577716 RHPN1Q8TCX5 695 aa12.82□□□□□ -0.36
RNF43-203ENST00000577716 U3KPZ7 1027 aaPredicted RBP12.82□□□□□ -0.36
RNF43-203ENST00000577716 MCM5P33992 734 aa12.81□□□□□ -0.36
RNF43-203ENST00000577716 ANKLE2Q86XL3 938 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms