RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 CARD10Q9BWT7 1032 aa14.82□□□□□ -0.04
CDK5RAP3-204ENST00000577664 PNNQ9H307 717 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-204ENST00000577664 FSTL1Q12841 308 aa14.81□□□□□ -0.04
CDK5RAP3-204ENST00000577664 WDR43Q15061 677 aaKnown RBP eCLIP14.81□□□□□ -0.04
CDK5RAP3-204ENST00000577664 PLEKHF1Q96S99 279 aa14.81□□□□□ -0.04
CDK5RAP3-204ENST00000577664 TFCP2L1Q9NZI6 479 aa14.81□□□□□ -0.04
CDK5RAP3-204ENST00000577664 HSPA1AP0DMV8 641 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-204ENST00000577664 HSPA1BP0DMV9 641 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-204ENST00000577664 RSPH6AQ9H0K4 717 aa14.8□□□□□ -0.04
CDK5RAP3-204ENST00000577664 ZBTB7CA1YPR0 619 aa14.79□□□□□ -0.04
CDK5RAP3-204ENST00000577664 U2AF1L5P0DN76 240 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-204ENST00000577664 U2AF1Q01081 240 aaKnown RBP eCLIP14.79□□□□□ -0.047e-10■□□□□ 10.2
CDK5RAP3-204ENST00000577664 ACSBG1Q96GR2 724 aa14.79□□□□□ -0.04
CDK5RAP3-204ENST00000577664 U2SURPO15042 1029 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-204ENST00000577664 SULT6B1Q6IMI4 303 aa14.78□□□□□ -0.04
CDK5RAP3-204ENST00000577664 LTV1Q96GA3 475 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-204ENST00000577664 NGEFQ8N5V2 710 aa14.77□□□□□ -0.05
CDK5RAP3-204ENST00000577664 NMRK2Q9NPI5 230 aa14.77□□□□□ -0.05
CDK5RAP3-204ENST00000577664 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.77□□□□□ -0.051e-11■□□□□ 11
CDK5RAP3-204ENST00000577664 FAM9BQ8IZU0 186 aa14.76□□□□□ -0.05
CDK5RAP3-204ENST00000577664 RUNDC1Q96C34 613 aa14.76□□□□□ -0.05
CDK5RAP3-204ENST00000577664 NLRP2Q9NX02 1062 aa14.76□□□□□ -0.05
CDK5RAP3-204ENST00000577664 CSB-PGBD3P0DP91 1061 aa14.75□□□□□ -0.05
CDK5RAP3-204ENST00000577664 RGPD2P0DJD1 1756 aa14.75□□□□□ -0.05
CDK5RAP3-204ENST00000577664 C10orf71Q711Q0 1435 aa14.75□□□□□ -0.05
CDK5RAP3-204ENST00000577664 HMOX1P09601 288 aa14.74□□□□□ -0.05
CDK5RAP3-204ENST00000577664 COL23A1Q86Y22 540 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP3-204ENST00000577664 AEBP1Q8IUX7 1158 aa14.74□□□□□ -0.05
CDK5RAP3-204ENST00000577664 LY75O60449 1722 aa14.73□□□□□ -0.05
CDK5RAP3-204ENST00000577664 PRKAR2BP31323 418 aa14.73□□□□□ -0.05
CDK5RAP3-204ENST00000577664 AMOTQ4VCS5 1084 aa14.73□□□□□ -0.05
CDK5RAP3-204ENST00000577664 PHACTR3Q96KR7 559 aa14.72□□□□□ -0.05
CDK5RAP3-204ENST00000577664 IL2RBP14784 551 aa14.71□□□□□ -0.05
CDK5RAP3-204ENST00000577664 USHBP1Q8N6Y0 703 aa14.71□□□□□ -0.05
CDK5RAP3-204ENST00000577664 RAPGEF4Q8WZA2 1011 aa14.71□□□□□ -0.05
CDK5RAP3-204ENST00000577664 TATP17735 454 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-204ENST00000577664 CCDC27Q2M243 656 aa14.7□□□□□ -0.06
CDK5RAP3-204ENST00000577664 FAM161AQ3B820 660 aa14.7□□□□□ -0.06
CDK5RAP3-204ENST00000577664 PLEKHO1Q53GL0 409 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-204ENST00000577664 HTATSF1O43719 755 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-204ENST00000577664 NEFMP07197 916 aa14.69□□□□□ -0.06
CDK5RAP3-204ENST00000577664 TMPOP42166 694 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-204ENST00000577664 MSL1Q68DK7 614 aa14.69□□□□□ -0.06
CDK5RAP3-204ENST00000577664 MEGF6O75095 1541 aa14.68□□□□□ -0.06
CDK5RAP3-204ENST00000577664 APAF1O14727 1248 aa14.68□□□□□ -0.06
CDK5RAP3-204ENST00000577664 NFE2L2Q16236 605 aa14.68□□□□□ -0.06
CDK5RAP3-204ENST00000577664 MTHFSDQ2M296 383 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-204ENST00000577664 C16orf71Q8IYS4 520 aaPredicted RBP14.68□□□□□ -0.06
CDK5RAP3-204ENST00000577664 GAS2L2Q8NHY3 880 aa14.68□□□□□ -0.06
CDK5RAP3-204ENST00000577664 KAT6BQ8WYB5 2073 aa14.68□□□□□ -0.06
CDK5RAP3-204ENST00000577664 KCNQ4P56696 695 aa14.67□□□□□ -0.06
CDK5RAP3-204ENST00000577664 CCDC146Q8IYE0 955 aa14.67□□□□□ -0.06
CDK5RAP3-204ENST00000577664 SPG7Q9UQ90 795 aa14.67□□□□□ -0.06
CDK5RAP3-204ENST00000577664 MAPK8IP3Q9UPT6 1336 aa14.66□□□□□ -0.06
CDK5RAP3-204ENST00000577664 PXDNLA1KZ92 1463 aa14.66□□□□□ -0.06
CDK5RAP3-204ENST00000577664 NKX1-1Q15270 411 aaPredicted RBP14.66□□□□□ -0.06
CDK5RAP3-204ENST00000577664 ZCRB1Q8TBF4 217 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-204ENST00000577664 PRDM10Q9NQV6 1147 aa14.66□□□□□ -0.06
CDK5RAP3-204ENST00000577664 PKD1L3Q7Z443 1732 aa14.66□□□□□ -0.06
CDK5RAP3-204ENST00000577664 MSH5O43196 834 aa14.65□□□□□ -0.06
CDK5RAP3-204ENST00000577664 AKAP4Q5JQC9 854 aa14.65□□□□□ -0.06
CDK5RAP3-204ENST00000577664 FLAD1Q8NFF5 587 aa14.65□□□□□ -0.06
CDK5RAP3-204ENST00000577664 TRIM35Q9UPQ4 493 aa14.65□□□□□ -0.06
CDK5RAP3-204ENST00000577664 ZNF521Q96K83 1311 aa14.65□□□□□ -0.06
CDK5RAP3-204ENST00000577664 RIPK4P57078 832 aa14.64□□□□□ -0.07
CDK5RAP3-204ENST00000577664 SMC1BQ8NDV3 1235 aa14.64□□□□□ -0.07
CDK5RAP3-204ENST00000577664 CYP27B1O15528 508 aa14.63□□□□□ -0.07
CDK5RAP3-204ENST00000577664 PHKG2P15735 406 aa14.63□□□□□ -0.07
CDK5RAP3-204ENST00000577664 RGS19P49795 217 aa14.63□□□□□ -0.07
CDK5RAP3-204ENST00000577664 IFNL2Q8IZJ0 200 aa14.63□□□□□ -0.07
CDK5RAP3-204ENST00000577664 GNAT3A8MTJ3 354 aa14.62□□□□□ -0.07
CDK5RAP3-204ENST00000577664 LMOD3Q0VAK6 560 aa14.62□□□□□ -0.07
CDK5RAP3-204ENST00000577664 WDR63Q8IWG1 891 aa14.62□□□□□ -0.07
CDK5RAP3-204ENST00000577664 WWC1Q8IX03 1113 aa14.62□□□□□ -0.07
CDK5RAP3-204ENST00000577664 CCNL1Q9UK58 526 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-204ENST00000577664 PCDH11XQ9BZA7 1347 aa14.62□□□□□ -0.07
CDK5RAP3-204ENST00000577664 PCDH11YQ9BZA8 1340 aa14.62□□□□□ -0.07
CDK5RAP3-204ENST00000577664 TNRC6CQ9HCJ0 1690 aaKnown RBP14.61□□□□□ -0.07
CDK5RAP3-204ENST00000577664 CEMIPQ8WUJ3 1361 aa14.61□□□□□ -0.07
CDK5RAP3-204ENST00000577664 HSP90AB1P08238 724 aaKnown RBP14.61□□□□□ -0.07
CDK5RAP3-204ENST00000577664 ADAMTS7Q9UKP4 1686 aa14.61□□□□□ -0.07
CDK5RAP3-204ENST00000577664 ZBED9Q6R2W3 1325 aa14.61□□□□□ -0.07
CDK5RAP3-204ENST00000577664 KIAA1551Q9HCM1 1747 aa14.61□□□□□ -0.07
CDK5RAP3-204ENST00000577664 HNRNPUQ00839 825 aaKnown RBP eCLIP14.6□□□□□ -0.07
CDK5RAP3-204ENST00000577664 ZNF530Q6P9A1 599 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-204ENST00000577664 IL17REQ8NFR9 667 aa14.6□□□□□ -0.07
CDK5RAP3-204ENST00000577664 DCAF5Q96JK2 942 aa14.6□□□□□ -0.07
CDK5RAP3-204ENST00000577664 IL16Q14005 1332 aa14.6□□□□□ -0.07
CDK5RAP3-204ENST00000577664 KDM2BQ8NHM5 1336 aa14.6□□□□□ -0.07
CDK5RAP3-204ENST00000577664 KIF13BQ9NQT8 1826 aa14.59□□□□□ -0.07
CDK5RAP3-204ENST00000577664 DLG5Q8TDM6 1919 aa14.59□□□□□ -0.07
CDK5RAP3-204ENST00000577664 HMGB2P26583 209 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-204ENST00000577664 MLLT1Q03111 559 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-204ENST00000577664 C1orf141Q5JVX7 400 aa14.59□□□□□ -0.07
CDK5RAP3-204ENST00000577664 BABAM1Q9NWV8 329 aa14.59□□□□□ -0.07
CDK5RAP3-204ENST00000577664 KCPQ6ZWJ8 1503 aa14.59□□□□□ -0.07
CDK5RAP3-204ENST00000577664 C5P01031 1676 aa14.58□□□□□ -0.07
CDK5RAP3-204ENST00000577664 FOXN1O15353 648 aa14.58□□□□□ -0.08
CDK5RAP3-204ENST00000577664 ERVV-2B6SEH9 535 aa14.57□□□□□ -0.08
CDK5RAP3-204ENST00000577664 RNMTO43148 476 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms