RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 PHKG2P15735 406 aa16.07■□□□□ 0.16
TSEN54-204ENST00000577197 NKX1-1Q15270 411 aaPredicted RBP16.07■□□□□ 0.16
TSEN54-204ENST00000577197 MCM10Q7L590 875 aa16.07■□□□□ 0.16
TSEN54-204ENST00000577197 RGS12O14924 1447 aa16.07■□□□□ 0.16
TSEN54-204ENST00000577197 SHANK3Q9BYB0 1731 aa16.07■□□□□ 0.16
TSEN54-204ENST00000577197 RNMTO43148 476 aaKnown RBP16.06■□□□□ 0.16
TSEN54-204ENST00000577197 RARSP54136 660 aaKnown RBP16.06■□□□□ 0.16
TSEN54-204ENST00000577197 CYP27B1O15528 508 aa16.05■□□□□ 0.16
TSEN54-204ENST00000577197 HOXB7P09629 217 aa16.05■□□□□ 0.16
TSEN54-204ENST00000577197 EXOSC9Q06265 439 aaKnown RBP16.05■□□□□ 0.16
TSEN54-204ENST00000577197 DCTN1Q14203 1278 aa16.05■□□□□ 0.16
TSEN54-204ENST00000577197 TSR2Q969E8 191 aaKnown RBP16.05■□□□□ 0.16
TSEN54-204ENST00000577197 THUMPD2Q9BTF0 503 aaKnown RBP16.05■□□□□ 0.16
TSEN54-204ENST00000577197 GTF3C3Q9Y5Q9 886 aa16.05■□□□□ 0.16
TSEN54-204ENST00000577197 TEFQ10587 303 aa16.04■□□□□ 0.16
TSEN54-204ENST00000577197 KRT27Q7Z3Y8 459 aa16.04■□□□□ 0.16
TSEN54-204ENST00000577197 DDX54Q8TDD1 881 aaKnown RBP16.04■□□□□ 0.16
TSEN54-204ENST00000577197 KDM6AO15550 1401 aaPredicted RBP16.03■□□□□ 0.16
TSEN54-204ENST00000577197 KIF16BQ96L93 1317 aa16.03■□□□□ 0.16
TSEN54-204ENST00000577197 MARCH10Q8NA82 808 aaPredicted RBP16.03■□□□□ 0.16
TSEN54-204ENST00000577197 TSPYL4Q9UJ04 414 aa16.03■□□□□ 0.16
TSEN54-204ENST00000577197 CACNA1FO60840 1977 aa16.03■□□□□ 0.16
TSEN54-204ENST00000577197 BCL9O00512 1426 aa16.02■□□□□ 0.16
TSEN54-204ENST00000577197 ERVV-2B6SEH9 535 aa16.02■□□□□ 0.16
TSEN54-204ENST00000577197 VAMP4O75379 141 aa16.02■□□□□ 0.16
TSEN54-204ENST00000577197 MS4A1P11836 297 aa16.02■□□□□ 0.16
TSEN54-204ENST00000577197 PDE3AQ14432 1141 aa16.02■□□□□ 0.16
TSEN54-204ENST00000577197 AAMPQ13685 434 aa16■□□□□ 0.15
TSEN54-204ENST00000577197 TWISTNBQ3B726 338 aaPredicted RBP16■□□□□ 0.15
TSEN54-204ENST00000577197 ARHGAP45Q92619 1136 aa16■□□□□ 0.15
TSEN54-204ENST00000577197 SLC52A2Q9HAB3 445 aa16■□□□□ 0.15
TSEN54-204ENST00000577197 LAS1LQ9Y4W2 734 aaKnown RBP16■□□□□ 0.15
TSEN54-204ENST00000577197 HEG1Q9ULI3 1381 aa16■□□□□ 0.15
TSEN54-204ENST00000577197 BRWD3Q6RI45 1802 aa15.99■□□□□ 0.15
TSEN54-204ENST00000577197 MPRIPQ6WCQ1 1025 aa15.99■□□□□ 0.15
TSEN54-204ENST00000577197 LGR6Q9HBX8 967 aa15.99■□□□□ 0.15
TSEN54-204ENST00000577197 IPO8O15397 1037 aaKnown RBP15.98■□□□□ 0.15
TSEN54-204ENST00000577197 FAM196AQ6ZSG2 479 aa15.98■□□□□ 0.15
TSEN54-204ENST00000577197 PAPPAQ13219 1627 aa15.97■□□□□ 0.15
TSEN54-204ENST00000577197 BTBD11A6QL63 1104 aa15.97■□□□□ 0.15
TSEN54-204ENST00000577197 C8orf58Q8NAV2 365 aa15.97■□□□□ 0.15
TSEN54-204ENST00000577197 FKBP8Q14318 412 aa15.96■□□□□ 0.15
TSEN54-204ENST00000577197 SSH1Q8WYL5 1049 aa15.96■□□□□ 0.15
TSEN54-204ENST00000577197 EIF4A1P60842 406 aaKnown RBP15.95■□□□□ 0.14
TSEN54-204ENST00000577197 SMC4Q9NTJ3 1288 aa15.95■□□□□ 0.14
TSEN54-204ENST00000577197 UBR2Q8IWV8 1755 aa15.95■□□□□ 0.14
TSEN54-204ENST00000577197 BCAR3O75815 825 aa15.94■□□□□ 0.14
TSEN54-204ENST00000577197 ZKSCAN2Q63HK3 967 aa15.94■□□□□ 0.14
TSEN54-204ENST00000577197 TSPYL6Q8N831 410 aa15.94■□□□□ 0.14
TSEN54-204ENST00000577197 CABP4P57796 275 aa15.93■□□□□ 0.14
TSEN54-204ENST00000577197 FAM182BQ5T319 152 aa15.93■□□□□ 0.14
TSEN54-204ENST00000577197 CCDC30Q5VVM6 783 aa15.93■□□□□ 0.14
TSEN54-204ENST00000577197 ZNF790Q6PG37 636 aa15.93■□□□□ 0.14
TSEN54-204ENST00000577197 TOGARAM1Q9Y4F4 1720 aa15.93■□□□□ 0.14
TSEN54-204ENST00000577197 PTPRCP08575 1304 aa15.93■□□□□ 0.14
TSEN54-204ENST00000577197 DOT1LQ8TEK3 1739 aa15.92■□□□□ 0.14
TSEN54-204ENST00000577197 MRPL50Q8N5N7 158 aaKnown RBP15.92■□□□□ 0.14
TSEN54-204ENST00000577197 TMOD3Q9NYL9 352 aa15.92■□□□□ 0.14
TSEN54-204ENST00000577197 PRIM1P49642 420 aaKnown RBP15.91■□□□□ 0.14
TSEN54-204ENST00000577197 ATF7IPQ6VMQ6 1270 aa15.91■□□□□ 0.14
TSEN54-204ENST00000577197 PPP4R2Q9NY27 417 aa15.91■□□□□ 0.14
TSEN54-204ENST00000577197 NHSQ6T4R5 1651 aa15.91■□□□□ 0.14
TSEN54-204ENST00000577197 LAMB4A4D0S4 1761 aa15.9■□□□□ 0.14
TSEN54-204ENST00000577197 CANXP27824 592 aaKnown RBP15.9■□□□□ 0.14
TSEN54-204ENST00000577197 NFATC2IPQ8NCF5 419 aa15.9■□□□□ 0.14
TSEN54-204ENST00000577197 SYTL4Q96C24 671 aaPredicted RBP15.9■□□□□ 0.14
TSEN54-204ENST00000577197 ACSBG1Q96GR2 724 aa15.9■□□□□ 0.14
TSEN54-204ENST00000577197 STK31Q9BXU1 1019 aa15.9■□□□□ 0.14
TSEN54-204ENST00000577197 API5Q9BZZ5 524 aaKnown RBP15.9■□□□□ 0.14
TSEN54-204ENST00000577197 BCL11BQ9C0K0 894 aaPredicted RBP15.9■□□□□ 0.14
TSEN54-204ENST00000577197 CHMP4BQ9H444 224 aaKnown RBP15.9■□□□□ 0.14
TSEN54-204ENST00000577197 MIS18AQ9NYP9 233 aa15.9■□□□□ 0.14
TSEN54-204ENST00000577197 ITGB4P16144 1822 aa15.89■□□□□ 0.13
TSEN54-204ENST00000577197 GIGYF1O75420 1035 aaPredicted RBP15.89■□□□□ 0.13
TSEN54-204ENST00000577197 TTC5Q8N0Z6 440 aa15.89■□□□□ 0.13
TSEN54-204ENST00000577197 CICQ96RK0 1608 aaPredicted RBP15.89■□□□□ 0.13
TSEN54-204ENST00000577197 ERBB4Q15303 1308 aa15.89■□□□□ 0.13
TSEN54-204ENST00000577197 DZIP1LQ8IYY4 767 aaKnown RBP15.88■□□□□ 0.13
TSEN54-204ENST00000577197 PIGBQ92521 554 aa15.88■□□□□ 0.13
TSEN54-204ENST00000577197 FMNL2Q96PY5 1086 aa15.88■□□□□ 0.13
TSEN54-204ENST00000577197 SBF2Q86WG5 1849 aa15.88■□□□□ 0.13
TSEN54-204ENST00000577197 PXDNLA1KZ92 1463 aa15.87■□□□□ 0.13
TSEN54-204ENST00000577197 KCNQ2O43526 872 aa15.87■□□□□ 0.13
TSEN54-204ENST00000577197 TRIM27P14373 513 aa15.87■□□□□ 0.13
TSEN54-204ENST00000577197 VSIG10Q8N0Z9 540 aa15.87■□□□□ 0.13
TSEN54-204ENST00000577197 KCPQ6ZWJ8 1503 aa15.87■□□□□ 0.13
TSEN54-204ENST00000577197 N4BP2Q86UW6 1770 aaPredicted RBP15.87■□□□□ 0.13
TSEN54-204ENST00000577197 IBTKQ9P2D0 1353 aaPredicted RBP15.87■□□□□ 0.13
TSEN54-204ENST00000577197 ZNF831Q5JPB2 1677 aa15.86■□□□□ 0.13
TSEN54-204ENST00000577197 PLIN1O60240 522 aa15.86■□□□□ 0.13
TSEN54-204ENST00000577197 TRIM37O94972 964 aa15.86■□□□□ 0.13
TSEN54-204ENST00000577197 SNRPA1P09661 255 aaKnown RBP15.86■□□□□ 0.13
TSEN54-204ENST00000577197 HDGFL1Q5TGJ6 251 aa15.86■□□□□ 0.13
TSEN54-204ENST00000577197 SMARCC1Q92922 1105 aaPredicted RBP15.86■□□□□ 0.13
TSEN54-204ENST00000577197 NOB1Q9ULX3 412 aaKnown RBP15.86■□□□□ 0.13
TSEN54-204ENST00000577197 ABCC4O15439 1325 aa15.86■□□□□ 0.13
TSEN54-204ENST00000577197 ELL2O00472 640 aaPredicted RBP15.85■□□□□ 0.13
TSEN54-204ENST00000577197 KRT24Q2M2I5 525 aa15.85■□□□□ 0.13
TSEN54-204ENST00000577197 CCDC125Q86Z20 511 aa15.85■□□□□ 0.13
TSEN54-204ENST00000577197 FTSJ3Q8IY81 847 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms