RNA–Protein interactions for RNA: ENST00000576952.1

POLR2A-208, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-208ENST00000576952 COL5A3P25940 1745 aaPredicted RBP20.46■□□□□ 0.87
POLR2A-208ENST00000576952 PHACTR3Q96KR7 559 aa20.45■□□□□ 0.86
POLR2A-208ENST00000576952 ZNF316A6NFI3 1004 aaPredicted RBP20.44■□□□□ 0.86
POLR2A-208ENST00000576952 NFATC2IPQ8NCF5 419 aa20.44■□□□□ 0.86
POLR2A-208ENST00000576952 MRC1P22897 1456 aa20.43■□□□□ 0.86
POLR2A-208ENST00000576952 MYH14Q7Z406 1995 aaKnown RBP20.43■□□□□ 0.86
POLR2A-208ENST00000576952 LOC102724428A0A0B4J2F2 783 aa20.43■□□□□ 0.86
POLR2A-208ENST00000576952 RNMTO43148 476 aaKnown RBP20.43■□□□□ 0.86
POLR2A-208ENST00000576952 SIK1P57059 783 aa20.43■□□□□ 0.86
POLR2A-208ENST00000576952 MYBBP1AQ9BQG0 1328 aaKnown RBP20.42■□□□□ 0.86
POLR2A-208ENST00000576952 TJP1Q07157 1748 aa20.41■□□□□ 0.86
POLR2A-208ENST00000576952 FCHSD2O94868 740 aa20.41■□□□□ 0.86
POLR2A-208ENST00000576952 ZBTB7AO95365 584 aa20.41■□□□□ 0.86
POLR2A-208ENST00000576952 GAS2L2Q8NHY3 880 aa20.41■□□□□ 0.86
POLR2A-208ENST00000576952 TFCP2L1Q9NZI6 479 aa20.41■□□□□ 0.86
POLR2A-208ENST00000576952 PNPLA7Q6ZV29 1317 aa20.41■□□□□ 0.86
POLR2A-208ENST00000576952 MAP3K5Q99683 1374 aa20.41■□□□□ 0.86
POLR2A-208ENST00000576952 COL24A1Q17RW2 1714 aa20.41■□□□□ 0.86
POLR2A-208ENST00000576952 UBR2Q8IWV8 1755 aa20.41■□□□□ 0.86
POLR2A-208ENST00000576952 SLC52A2Q9HAB3 445 aa20.4■□□□□ 0.86
POLR2A-208ENST00000576952 SPON1Q9HCB6 807 aa20.4■□□□□ 0.86
POLR2A-208ENST00000576952 GNAT3A8MTJ3 354 aa20.39■□□□□ 0.85
POLR2A-208ENST00000576952 ATP6V1AP38606 617 aa20.39■□□□□ 0.85
POLR2A-208ENST00000576952 ITPK1Q13572 414 aa20.39■□□□□ 0.85
POLR2A-208ENST00000576952 SLC4A9Q96Q91 983 aa20.39■□□□□ 0.85
POLR2A-208ENST00000576952 RBM42Q9BTD8 480 aaKnown RBP20.39■□□□□ 0.85
POLR2A-208ENST00000576952 PRKRIP1Q9H875 184 aaPredicted RBP20.39■□□□□ 0.85
POLR2A-208ENST00000576952 LINC00116Q8NCU8 138 aa20.38■□□□□ 0.85
POLR2A-208ENST00000576952 ATF5Q9Y2D1 282 aaPredicted RBP20.38■□□□□ 0.85
POLR2A-208ENST00000576952 CICQ96RK0 1608 aaPredicted RBP20.38■□□□□ 0.85
POLR2A-208ENST00000576952 IL17REQ8NFR9 667 aa20.37■□□□□ 0.85
POLR2A-208ENST00000576952 PTCD1O75127 700 aaKnown RBP20.36■□□□□ 0.85
POLR2A-208ENST00000576952 SLC39A6Q13433 755 aa20.35■□□□□ 0.85
POLR2A-208ENST00000576952 MTFR1LQ9H019 292 aa20.35■□□□□ 0.85
POLR2A-208ENST00000576952 AMIGO3Q86WK7 504 aa20.34■□□□□ 0.85
POLR2A-208ENST00000576952 AK7Q96M32 723 aa20.34■□□□□ 0.85
POLR2A-208ENST00000576952 KCPQ6ZWJ8 1503 aa20.33■□□□□ 0.85
POLR2A-208ENST00000576952 HMGB2P26583 209 aaKnown RBP20.33■□□□□ 0.85
POLR2A-208ENST00000576952 PTGER2P43116 358 aa20.33■□□□□ 0.85
POLR2A-208ENST00000576952 SMIM5Q71RC9 77 aa20.33■□□□□ 0.85
POLR2A-208ENST00000576952 COL23A1Q86Y22 540 aaPredicted RBP20.33■□□□□ 0.85
POLR2A-208ENST00000576952 PLEKHF1Q96S99 279 aa20.33■□□□□ 0.85
POLR2A-208ENST00000576952 C4AP0C0L4 1744 aa20.33■□□□□ 0.84
POLR2A-208ENST00000576952 MSH5O43196 834 aa20.32■□□□□ 0.84
POLR2A-208ENST00000576952 TEFQ10587 303 aa20.32■□□□□ 0.84
POLR2A-208ENST00000576952 CEMIPQ8WUJ3 1361 aa20.32■□□□□ 0.84
POLR2A-208ENST00000576952 PPP1R1BQ9UD71 204 aaPredicted RBP20.31■□□□□ 0.84
POLR2A-208ENST00000576952 PHF14O94880 888 aa20.3■□□□□ 0.84
POLR2A-208ENST00000576952 NEFMP07197 916 aa20.3■□□□□ 0.84
POLR2A-208ENST00000576952 MCM10Q7L590 875 aa20.3■□□□□ 0.84
POLR2A-208ENST00000576952 SLC16A10Q8TF71 515 aa20.3■□□□□ 0.84
POLR2A-208ENST00000576952 SGIP1Q9BQI5 828 aa20.3■□□□□ 0.84
POLR2A-208ENST00000576952 GNPATO15228 680 aa20.29■□□□□ 0.84
POLR2A-208ENST00000576952 DCTN1Q14203 1278 aa20.29■□□□□ 0.84
POLR2A-208ENST00000576952 RTF1Q92541 710 aaKnown RBP20.29■□□□□ 0.84
POLR2A-208ENST00000576952 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.28■□□□□ 0.84
POLR2A-208ENST00000576952 FLAD1Q8NFF5 587 aa20.27■□□□□ 0.84
POLR2A-208ENST00000576952 PNNQ9H307 717 aaKnown RBP20.27■□□□□ 0.84
POLR2A-208ENST00000576952 CNTNAP4Q9C0A0 1308 aa20.27■□□□□ 0.83
POLR2A-208ENST00000576952 MAPK8IP3Q9UPT6 1336 aa20.27■□□□□ 0.83
POLR2A-208ENST00000576952 KDM3BQ7LBC6 1761 aa20.26■□□□□ 0.83
POLR2A-208ENST00000576952 SSFA2P28290 1259 aa20.26■□□□□ 0.83
POLR2A-208ENST00000576952 NFE2L2Q16236 605 aa20.26■□□□□ 0.83
POLR2A-208ENST00000576952 DNAJC10Q8IXB1 793 aa20.26■□□□□ 0.83
POLR2A-208ENST00000576952 HTATSF1O43719 755 aaKnown RBP20.25■□□□□ 0.83
POLR2A-208ENST00000576952 WDR43Q15061 677 aaKnown RBP eCLIP20.25■□□□□ 0.83
POLR2A-208ENST00000576952 RC3H1Q5TC82 1133 aaKnown RBP20.25■□□□□ 0.83
POLR2A-208ENST00000576952 MSL1Q68DK7 614 aa20.25■□□□□ 0.83
POLR2A-208ENST00000576952 ZNF790Q6PG37 636 aa20.25■□□□□ 0.83
POLR2A-208ENST00000576952 TTC5Q8N0Z6 440 aa20.25■□□□□ 0.83
POLR2A-208ENST00000576952 BTBD11A6QL63 1104 aa20.24■□□□□ 0.83
POLR2A-208ENST00000576952 CRKLP46109 303 aaKnown RBP20.24■□□□□ 0.83
POLR2A-208ENST00000576952 CCDC146Q8IYE0 955 aa20.24■□□□□ 0.83
POLR2A-208ENST00000576952 KCNQ3O43525 872 aa20.23■□□□□ 0.83
POLR2A-208ENST00000576952 ZNF496Q96IT1 587 aaPredicted RBP20.23■□□□□ 0.83
POLR2A-208ENST00000576952 ADAMTS8Q9UP79 889 aa20.23■□□□□ 0.83
POLR2A-208ENST00000576952 RTCBQ9Y3I0 505 aaKnown RBP20.23■□□□□ 0.83
POLR2A-208ENST00000576952 RPS6KA4O75676 772 aa20.22■□□□□ 0.83
POLR2A-208ENST00000576952 CCDC184Q52MB2 194 aa20.22■□□□□ 0.83
POLR2A-208ENST00000576952 ARXQ96QS3 562 aa20.22■□□□□ 0.83
POLR2A-208ENST00000576952 POLD1P28340 1107 aa20.21■□□□□ 0.83
POLR2A-208ENST00000576952 THUMPD2Q9BTF0 503 aaKnown RBP20.21■□□□□ 0.83
POLR2A-208ENST00000576952 HEG1Q9ULI3 1381 aa20.21■□□□□ 0.83
POLR2A-208ENST00000576952 CYP19A1P11511 503 aaPredicted RBP20.2■□□□□ 0.82
POLR2A-208ENST00000576952 TRAPPC3LQ5T215 181 aa20.2■□□□□ 0.82
POLR2A-208ENST00000576952 INTS5Q6P9B9 1019 aaKnown RBP20.2■□□□□ 0.82
POLR2A-208ENST00000576952 VSIG10Q8N0Z9 540 aa20.2■□□□□ 0.82
POLR2A-208ENST00000576952 FHDC1Q9C0D6 1143 aaPredicted RBP20.2■□□□□ 0.82
POLR2A-208ENST00000576952 LAMB4A4D0S4 1761 aa20.2■□□□□ 0.82
POLR2A-208ENST00000576952 ANP32CO43423 234 aa20.19■□□□□ 0.82
POLR2A-208ENST00000576952 TMPOP42166 694 aaKnown RBP20.19■□□□□ 0.82
POLR2A-208ENST00000576952 RIPK4P57078 832 aa20.19■□□□□ 0.82
POLR2A-208ENST00000576952 ARHGEF1Q92888 912 aaKnown RBP20.19■□□□□ 0.82
POLR2A-208ENST00000576952 CCDC87Q9NVE4 849 aa20.19■□□□□ 0.82
POLR2A-208ENST00000576952 RRP7AQ9Y3A4 280 aaKnown RBP20.19■□□□□ 0.82
POLR2A-208ENST00000576952 TAF7Q15545 349 aaPredicted RBP20.18■□□□□ 0.82
POLR2A-208ENST00000576952 RUNDC1Q96C34 613 aa20.18■□□□□ 0.82
POLR2A-208ENST00000576952 FMNL2Q96PY5 1086 aa20.18■□□□□ 0.82
POLR2A-208ENST00000576952 MIS18AQ9NYP9 233 aa20.18■□□□□ 0.82
POLR2A-208ENST00000576952 ADRA2BP18089 450 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms