RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 MRPL50Q8N5N7 158 aaKnown RBP9.11□□□□□ -0.95
NUP88-212ENST00000576708 NBPF3Q9H094 633 aa9.11□□□□□ -0.95
NUP88-212ENST00000576708 KIF1AQ12756 1690 aa9.1□□□□□ -0.95
NUP88-212ENST00000576708 PRR36Q9H6K5 1346 aa9.1□□□□□ -0.95
NUP88-212ENST00000576708 USP32Q8NFA0 1604 aa9.1□□□□□ -0.95
NUP88-212ENST00000576708 PSME1Q06323 249 aa9.1□□□□□ -0.95
NUP88-212ENST00000576708 GJD4Q96KN9 370 aaPredicted RBP9.1□□□□□ -0.95
NUP88-212ENST00000576708 STAC3Q96MF2 364 aa9.1□□□□□ -0.95
NUP88-212ENST00000576708 KDM4CQ9H3R0 1056 aa9.1□□□□□ -0.95
NUP88-212ENST00000576708 MARF1Q9Y4F3 1742 aaKnown RBP9.1□□□□□ -0.95
NUP88-212ENST00000576708 DLC1Q96QB1 1528 aa9.1□□□□□ -0.95
NUP88-212ENST00000576708 TNS3Q68CZ2 1445 aa9.09□□□□□ -0.95
NUP88-212ENST00000576708 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.09□□□□□ -0.95
NUP88-212ENST00000576708 DNAJB2P25686 324 aa9.09□□□□□ -0.95
NUP88-212ENST00000576708 FAM98CQ17RN3 349 aaKnown RBP9.09□□□□□ -0.95
NUP88-212ENST00000576708 GIGYF2Q6Y7W6 1299 aaKnown RBP9.09□□□□□ -0.95
NUP88-212ENST00000576708 UNC5CLQ8IV45 518 aa9.09□□□□□ -0.95
NUP88-212ENST00000576708 ATAD2Q6PL18 1390 aa9.09□□□□□ -0.95
NUP88-212ENST00000576708 CLCN1P35523 988 aa9.08□□□□□ -0.96
NUP88-212ENST00000576708 SWT1Q5T5J6 900 aaKnown RBP9.08□□□□□ -0.96
NUP88-212ENST00000576708 GPCPD1Q9NPB8 672 aa9.08□□□□□ -0.96
NUP88-212ENST00000576708 SLIT2O94813 1529 aa9.08□□□□□ -0.96
NUP88-212ENST00000576708 RALGAPBQ86X10 1494 aa9.08□□□□□ -0.96
NUP88-212ENST00000576708 GLI3P10071 1580 aa9.07□□□□□ -0.96
NUP88-212ENST00000576708 WASLO00401 505 aaPredicted RBP9.07□□□□□ -0.96
NUP88-212ENST00000576708 SAMD7Q7Z3H4 446 aa9.07□□□□□ -0.96
NUP88-212ENST00000576708 ZFRQ96KR1 1074 aaKnown RBP9.07□□□□□ -0.96
NUP88-212ENST00000576708 TMUB1Q9BVT8 246 aa9.07□□□□□ -0.96
NUP88-212ENST00000576708 TMEM134Q9H6X4 195 aa9.07□□□□□ -0.96
NUP88-212ENST00000576708 SBNO1A3KN83 1393 aa9.07□□□□□ -0.96
NUP88-212ENST00000576708 ADGRB2O60241 1585 aa9.07□□□□□ -0.96
NUP88-212ENST00000576708 ANKARQ7Z5J8 1434 aa9.06□□□□□ -0.96
NUP88-212ENST00000576708 FAM83GA6ND36 823 aa9.06□□□□□ -0.96
NUP88-212ENST00000576708 HRCP23327 699 aa9.06□□□□□ -0.96
NUP88-212ENST00000576708 LAPTM4BQ86VI4 370 aa9.06□□□□□ -0.96
NUP88-212ENST00000576708 GOLGA8CPA6NN73 597 aa9.05□□□□□ -0.96
NUP88-212ENST00000576708 DAXXQ9UER7 740 aaPredicted RBP9.05□□□□□ -0.96
NUP88-212ENST00000576708 CCDC9Q9Y3X0 531 aaKnown RBP9.05□□□□□ -0.96
NUP88-212ENST00000576708 ABCA3Q99758 1704 aa9.05□□□□□ -0.96
NUP88-212ENST00000576708 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.05□□□□□ -0.96
NUP88-212ENST00000576708 TULP4Q9NRJ4 1543 aa9.05□□□□□ -0.96
NUP88-212ENST00000576708 ARHGEF10O15013 1369 aa9.04□□□□□ -0.96
NUP88-212ENST00000576708 DDX11L8A8MPP1 907 aa9.04□□□□□ -0.96
NUP88-212ENST00000576708 RNF40O75150 1001 aa9.04□□□□□ -0.96
NUP88-212ENST00000576708 MS4A1P11836 297 aa9.04□□□□□ -0.96
NUP88-212ENST00000576708 SSTR3P32745 418 aaPredicted RBP9.04□□□□□ -0.96
NUP88-212ENST00000576708 VPS72Q15906 364 aa9.04□□□□□ -0.96
NUP88-212ENST00000576708 NBPF1Q3BBV0 1214 aa9.04□□□□□ -0.96
NUP88-212ENST00000576708 SEPT12Q8IYM1 358 aa9.04□□□□□ -0.96
NUP88-212ENST00000576708 NGDNQ8NEJ9 315 aaKnown RBP9.04□□□□□ -0.96
NUP88-212ENST00000576708 NUDT16Q96DE0 195 aaKnown RBP9.04□□□□□ -0.96
NUP88-212ENST00000576708 FAM217BQ9NTX9 383 aaPredicted RBP9.04□□□□□ -0.96
NUP88-212ENST00000576708 TRPM3Q9HCF6 1732 aaPredicted RBP9.04□□□□□ -0.96
NUP88-212ENST00000576708 PLCH1Q4KWH8 1693 aa9.04□□□□□ -0.96
NUP88-212ENST00000576708 ARHGEF28Q8N1W1 1705 aaKnown RBP9.03□□□□□ -0.96
NUP88-212ENST00000576708 GPRASP1Q5JY77 1395 aa9.03□□□□□ -0.96
NUP88-212ENST00000576708 CDK19Q9BWU1 502 aa9.03□□□□□ -0.96
NUP88-212ENST00000576708 FAM117AQ9C073 453 aa9.03□□□□□ -0.96
NUP88-212ENST00000576708 BTG4Q9NY30 223 aa9.03□□□□□ -0.96
NUP88-212ENST00000576708 ALS2Q96Q42 1657 aa9.02□□□□□ -0.97
NUP88-212ENST00000576708 NUTM2GQ5VZR2 741 aa9.02□□□□□ -0.97
NUP88-212ENST00000576708 DEFB132Q7Z7B7 95 aa9.02□□□□□ -0.97
NUP88-212ENST00000576708 IL27Q8NEV9 243 aa9.02□□□□□ -0.97
NUP88-212ENST00000576708 BRWD3Q6RI45 1802 aa9.02□□□□□ -0.97
NUP88-212ENST00000576708 ATP7BP35670 1465 aa9.02□□□□□ -0.97
NUP88-212ENST00000576708 EIF3AQ14152 1382 aaKnown RBP9.01□□□□□ -0.97
NUP88-212ENST00000576708 A0A0G2JS52 829 aa9.01□□□□□ -0.97
NUP88-212ENST00000576708 MYT1Q01538 1121 aa9.01□□□□□ -0.97
NUP88-212ENST00000576708 WNT2BQ93097 391 aa9.01□□□□□ -0.97
NUP88-212ENST00000576708 NWD2Q9ULI1 1742 aa9□□□□□ -0.97
NUP88-212ENST00000576708 BCAMP50895 628 aa9□□□□□ -0.97
NUP88-212ENST00000576708 CHRNA2Q15822 529 aa9□□□□□ -0.97
NUP88-212ENST00000576708 FAM182BQ5T319 152 aa9□□□□□ -0.97
NUP88-212ENST00000576708 RDH13Q8NBN7 331 aa9□□□□□ -0.97
NUP88-212ENST00000576708 LRCH3Q96II8 777 aa9□□□□□ -0.97
NUP88-212ENST00000576708 SIN3AQ96ST3 1273 aa9□□□□□ -0.97
NUP88-212ENST00000576708 ACEP12821 1306 aa9□□□□□ -0.97
NUP88-212ENST00000576708 NRAPQ86VF7 1730 aa9□□□□□ -0.97
NUP88-212ENST00000576708 EP400Q96L91 3159 aa8.99□□□□□ -0.97
NUP88-212ENST00000576708 SLC10A3P09131 477 aa8.99□□□□□ -0.97
NUP88-212ENST00000576708 ZC3H6P61129 1189 aaKnown RBP8.99□□□□□ -0.97
NUP88-212ENST00000576708 NBPF8Q3BBV2 869 aa8.99□□□□□ -0.97
NUP88-212ENST00000576708 KRT27Q7Z3Y8 459 aa8.99□□□□□ -0.97
NUP88-212ENST00000576708 CCDC125Q86Z20 511 aa8.99□□□□□ -0.97
NUP88-212ENST00000576708 ANKK1Q8NFD2 765 aa8.99□□□□□ -0.97
NUP88-212ENST00000576708 KCTD12Q96CX2 325 aaKnown RBP8.99□□□□□ -0.97
NUP88-212ENST00000576708 BEGAINQ9BUH8 593 aa8.99□□□□□ -0.97
NUP88-212ENST00000576708 PRDM11Q9NQV5 511 aa8.99□□□□□ -0.97
NUP88-212ENST00000576708 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.99□□□□□ -0.97
NUP88-212ENST00000576708 CRYBG1Q9Y4K1 1723 aa8.99□□□□□ -0.97
NUP88-212ENST00000576708 KIAA0232Q92628 1395 aa8.99□□□□□ -0.97
NUP88-212ENST00000576708 BLMP54132 1417 aaPredicted RBP8.98□□□□□ -0.97
NUP88-212ENST00000576708 SULF1Q8IWU6 871 aa8.98□□□□□ -0.97
NUP88-212ENST00000576708 L3MBTL2Q969R5 705 aa8.98□□□□□ -0.97
NUP88-212ENST00000576708 COL14A1Q05707 1796 aaKnown RBP8.98□□□□□ -0.97
NUP88-212ENST00000576708 PLEKHG3A1L390 1219 aa8.97□□□□□ -0.97
NUP88-212ENST00000576708 CD46P15529 392 aa8.97□□□□□ -0.97
NUP88-212ENST00000576708 SRPK2P78362 688 aaKnown RBP8.97□□□□□ -0.97
NUP88-212ENST00000576708 STRN4Q9NRL3 753 aa8.97□□□□□ -0.97
NUP88-212ENST00000576708 SPATA31A5Q5VU36 1347 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms