RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 GCP02774 474 aa17.45■□□□□ 0.38
RAB40B-211ENST00000576359 CHMP5Q9NZZ3 219 aa17.45■□□□□ 0.38
RAB40B-211ENST00000576359 KDM3BQ7LBC6 1761 aa17.45■□□□□ 0.38
RAB40B-211ENST00000576359 PLEKHG5O94827 1062 aa17.45■□□□□ 0.38
RAB40B-211ENST00000576359 ARHGEF25Q86VW2 580 aa17.45■□□□□ 0.38
RAB40B-211ENST00000576359 IL27Q8NEV9 243 aa17.45■□□□□ 0.38
RAB40B-211ENST00000576359 SNX21Q969T3 373 aa17.44■□□□□ 0.38
RAB40B-211ENST00000576359 NCAPD2Q15021 1401 aa17.43■□□□□ 0.38
RAB40B-211ENST00000576359 GNAI2P04899 355 aa17.43■□□□□ 0.38
RAB40B-211ENST00000576359 PXDNQ92626 1479 aa17.42■□□□□ 0.38
RAB40B-211ENST00000576359 HDGFL1Q5TGJ6 251 aa17.42■□□□□ 0.38
RAB40B-211ENST00000576359 NCOA3Q9Y6Q9 1424 aa17.42■□□□□ 0.38
RAB40B-211ENST00000576359 HMMRO75330 724 aa17.42■□□□□ 0.38
RAB40B-211ENST00000576359 EIF4A1P60842 406 aaKnown RBP17.42■□□□□ 0.38
RAB40B-211ENST00000576359 PHAXQ9H814 394 aaKnown RBP17.42■□□□□ 0.38
RAB40B-211ENST00000576359 PXDNLA1KZ92 1463 aa17.42■□□□□ 0.38
RAB40B-211ENST00000576359 C1orf167Q5SNV9 1468 aa17.42■□□□□ 0.38
RAB40B-211ENST00000576359 KCNQ3O43525 872 aa17.41■□□□□ 0.38
RAB40B-211ENST00000576359 PROSER2Q86WR7 435 aaPredicted RBP17.41■□□□□ 0.38
RAB40B-211ENST00000576359 BRPF3Q9ULD4 1205 aa17.41■□□□□ 0.38
RAB40B-211ENST00000576359 CAMTA1Q9Y6Y1 1673 aa17.41■□□□□ 0.38
RAB40B-211ENST00000576359 LMOD2Q6P5Q4 547 aa17.41■□□□□ 0.38
RAB40B-211ENST00000576359 SDSP20132 328 aa17.4■□□□□ 0.38
RAB40B-211ENST00000576359 MCM4P33991 863 aa17.4■□□□□ 0.38
RAB40B-211ENST00000576359 ZNF530Q6P9A1 599 aaPredicted RBP17.4■□□□□ 0.38
RAB40B-211ENST00000576359 AXIN2Q9Y2T1 843 aa17.4■□□□□ 0.38
RAB40B-211ENST00000576359 PNMA6EA0A0J9YXQ4 647 aa17.4■□□□□ 0.38
RAB40B-211ENST00000576359 CD2BP2O95400 341 aaKnown RBP17.4■□□□□ 0.38
RAB40B-211ENST00000576359 AKAP4Q5JQC9 854 aa17.4■□□□□ 0.38
RAB40B-211ENST00000576359 KRT28Q7Z3Y7 464 aa17.4■□□□□ 0.38
RAB40B-211ENST00000576359 KIF1AQ12756 1690 aa17.39■□□□□ 0.37
RAB40B-211ENST00000576359 GNAI3P08754 354 aa17.39■□□□□ 0.37
RAB40B-211ENST00000576359 ANKRD24Q8TF21 1146 aa17.39■□□□□ 0.37
RAB40B-211ENST00000576359 EXOC6BQ9Y2D4 811 aa17.39■□□□□ 0.37
RAB40B-211ENST00000576359 MPRIPQ6WCQ1 1025 aa17.39■□□□□ 0.37
RAB40B-211ENST00000576359 RBM42Q9BTD8 480 aaKnown RBP17.39■□□□□ 0.37
RAB40B-211ENST00000576359 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
RAB40B-211ENST00000576359 USP44Q9H0E7 712 aa17.38■□□□□ 0.37
RAB40B-211ENST00000576359 HSP90AB1P08238 724 aaKnown RBP17.38■□□□□ 0.37
RAB40B-211ENST00000576359 DDIT3P35638 169 aa17.38■□□□□ 0.37
RAB40B-211ENST00000576359 PLEKHO1Q53GL0 409 aaPredicted RBP17.38■□□□□ 0.37
RAB40B-211ENST00000576359 ALS2Q96Q42 1657 aa17.37■□□□□ 0.37
RAB40B-211ENST00000576359 EIF2S2P20042 333 aaKnown RBP17.37■□□□□ 0.37
RAB40B-211ENST00000576359 ATP8B2P98198 1209 aa17.37■□□□□ 0.37
RAB40B-211ENST00000576359 LRRFIP2Q9Y608 721 aaKnown RBP17.37■□□□□ 0.37
RAB40B-211ENST00000576359 SALL3Q9BXA9 1300 aa17.36■□□□□ 0.37
RAB40B-211ENST00000576359 OSBPL3Q9H4L5 887 aa17.36■□□□□ 0.37
RAB40B-211ENST00000576359 C19orf44Q9H6X5 657 aa17.36■□□□□ 0.37
RAB40B-211ENST00000576359 CHPF2Q9P2E5 772 aa17.36■□□□□ 0.37
RAB40B-211ENST00000576359 RNMTO43148 476 aaKnown RBP17.36■□□□□ 0.37
RAB40B-211ENST00000576359 HOXB7P09629 217 aa17.36■□□□□ 0.37
RAB40B-211ENST00000576359 PDE1AP54750 535 aa17.36■□□□□ 0.37
RAB40B-211ENST00000576359 TEFQ10587 303 aa17.36■□□□□ 0.37
RAB40B-211ENST00000576359 AMOTQ4VCS5 1084 aa17.36■□□□□ 0.37
RAB40B-211ENST00000576359 MST1RQ04912 1400 aa17.35■□□□□ 0.37
RAB40B-211ENST00000576359 TUBGCP6Q96RT7 1819 aa17.35■□□□□ 0.37
RAB40B-211ENST00000576359 BTBD11A6QL63 1104 aa17.35■□□□□ 0.37
RAB40B-211ENST00000576359 STRCP1A6NGW2 1772 aa17.35■□□□□ 0.37
RAB40B-211ENST00000576359 IBTKQ9P2D0 1353 aaPredicted RBP17.34■□□□□ 0.37
RAB40B-211ENST00000576359 USP26Q9BXU7 913 aa17.34■□□□□ 0.37
RAB40B-211ENST00000576359 EIF5BO60841 1220 aaKnown RBP17.34■□□□□ 0.37
RAB40B-211ENST00000576359 TSHZ3Q63HK5 1081 aa17.34■□□□□ 0.37
RAB40B-211ENST00000576359 OVOS2A0A0G2JMS6 1433 aa17.33■□□□□ 0.36
RAB40B-211ENST00000576359 SIPA1L3O60292 1781 aaPredicted RBP17.33■□□□□ 0.36
RAB40B-211ENST00000576359 K7ELQ4 463 aaPredicted RBP17.33■□□□□ 0.36
RAB40B-211ENST00000576359 ANXA1P04083 346 aa17.33■□□□□ 0.36
RAB40B-211ENST00000576359 C1orf141Q5JVX7 400 aa17.33■□□□□ 0.36
RAB40B-211ENST00000576359 LRRCC1Q9C099 1032 aa17.33■□□□□ 0.36
RAB40B-211ENST00000576359 UBTFL1P0CB47 393 aaPredicted RBP17.32■□□□□ 0.36
RAB40B-211ENST00000576359 DDX17Q92841 729 aaKnown RBP17.32■□□□□ 0.36
RAB40B-211ENST00000576359 RTN4Q9NQC3 1192 aaKnown RBP17.32■□□□□ 0.36
RAB40B-211ENST00000576359 ERBB3P21860 1342 aa17.32■□□□□ 0.36
RAB40B-211ENST00000576359 ADAMTS7Q9UKP4 1686 aa17.32■□□□□ 0.36
RAB40B-211ENST00000576359 HSP90AA1P07900 732 aaKnown RBP17.31■□□□□ 0.36
RAB40B-211ENST00000576359 ZC3H6P61129 1189 aaKnown RBP17.31■□□□□ 0.36
RAB40B-211ENST00000576359 CIZ1Q9ULV3 898 aaPredicted RBP17.31■□□□□ 0.36
RAB40B-211ENST00000576359 SRCIN1Q9C0H9 1055 aa17.31■□□□□ 0.36
RAB40B-211ENST00000576359 ADCY9O60503 1353 aa17.31■□□□□ 0.36
RAB40B-211ENST00000576359 TMEM94Q12767 1356 aa17.31■□□□□ 0.36
RAB40B-211ENST00000576359 PI4KAP2A4QPH2 592 aa17.3■□□□□ 0.36
RAB40B-211ENST00000576359 BEND3Q5T5X7 828 aa17.3■□□□□ 0.36
RAB40B-211ENST00000576359 PI4KAP1Q8N8J0 262 aa17.3■□□□□ 0.36
RAB40B-211ENST00000576359 ANO8Q9HCE9 1232 aaPredicted RBP17.3■□□□□ 0.36
RAB40B-211ENST00000576359 FOXD4L1Q9NU39 408 aa17.3■□□□□ 0.36
RAB40B-211ENST00000576359 HEG1Q9ULI3 1381 aa17.3■□□□□ 0.36
RAB40B-211ENST00000576359 SSH3Q8TE77 659 aa17.3■□□□□ 0.36
RAB40B-211ENST00000576359 TRAK2O60296 914 aa17.29■□□□□ 0.36
RAB40B-211ENST00000576359 CASC1Q6TDU7 716 aa17.29■□□□□ 0.36
RAB40B-211ENST00000576359 DNAAF4Q8WXU2 420 aa17.29■□□□□ 0.36
RAB40B-211ENST00000576359 PRAMEF22A3QJZ6 481 aa17.29■□□□□ 0.36
RAB40B-211ENST00000576359 NBPF7P0C2Y1 421 aaPredicted RBP17.29■□□□□ 0.36
RAB40B-211ENST00000576359 TNPO1Q92973 898 aaKnown RBP17.29■□□□□ 0.36
RAB40B-211ENST00000576359 LMTK3Q96Q04 1460 aa17.28■□□□□ 0.36
RAB40B-211ENST00000576359 DDX11L8A8MPP1 907 aa17.28■□□□□ 0.36
RAB40B-211ENST00000576359 GIGYF1O75420 1035 aaPredicted RBP17.28■□□□□ 0.36
RAB40B-211ENST00000576359 MX1P20591 662 aa17.28■□□□□ 0.36
RAB40B-211ENST00000576359 RABEP1Q15276 862 aa17.28■□□□□ 0.36
RAB40B-211ENST00000576359 POLA2Q14181 598 aa17.28■□□□□ 0.36
RAB40B-211ENST00000576359 RAB3GAP1Q15042 981 aa17.28■□□□□ 0.36
RAB40B-211ENST00000576359 PROSER3Q2NL68 480 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms