RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 SLC52A2Q9HAB3 445 aa31.31■■■□□ 2.6
SNF8-217ENST00000576353 ATP6V1AP38606 617 aa31.29■■■□□ 2.6
SNF8-217ENST00000576353 MAP3K5Q99683 1374 aa31.29■■■□□ 2.6
SNF8-217ENST00000576353 ZBTB7AO95365 584 aa31.28■■■□□ 2.6
SNF8-217ENST00000576353 PRKRIP1Q9H875 184 aaPredicted RBP31.28■■■□□ 2.6
SNF8-217ENST00000576353 NEFMP07197 916 aa31.27■■■□□ 2.6
SNF8-217ENST00000576353 RBM42Q9BTD8 480 aaKnown RBP31.27■■■□□ 2.6
SNF8-217ENST00000576353 MTFR1LQ9H019 292 aa31.26■■■□□ 2.59
SNF8-217ENST00000576353 PNNQ9H307 717 aaKnown RBP31.26■■■□□ 2.59
SNF8-217ENST00000576353 PNPLA7Q6ZV29 1317 aa31.25■■■□□ 2.59
SNF8-217ENST00000576353 CASZ1Q86V15 1759 aa31.25■■■□□ 2.59
SNF8-217ENST00000576353 SLC16A10Q8TF71 515 aa31.25■■■□□ 2.59
SNF8-217ENST00000576353 AK7Q96M32 723 aa31.24■■■□□ 2.59
SNF8-217ENST00000576353 SCN11AQ9UI33 1791 aa31.23■■■□□ 2.59
SNF8-217ENST00000576353 ITPK1Q13572 414 aa31.23■■■□□ 2.59
SNF8-217ENST00000576353 FLAD1Q8NFF5 587 aa31.23■■■□□ 2.59
SNF8-217ENST00000576353 IL17REQ8NFR9 667 aa31.23■■■□□ 2.59
SNF8-217ENST00000576353 ATF5Q9Y2D1 282 aaPredicted RBP31.23■■■□□ 2.59
SNF8-217ENST00000576353 PTCD1O75127 700 aaKnown RBP31.22■■■□□ 2.59
SNF8-217ENST00000576353 LINC00116Q8NCU8 138 aa31.22■■■□□ 2.59
SNF8-217ENST00000576353 MRC1P22897 1456 aa31.21■■■□□ 2.59
SNF8-217ENST00000576353 TEFQ10587 303 aa31.21■■■□□ 2.59
SNF8-217ENST00000576353 PPP1R1BQ9UD71 204 aaPredicted RBP31.21■■■□□ 2.59
SNF8-217ENST00000576353 C5P01031 1676 aa31.21■■■□□ 2.59
SNF8-217ENST00000576353 SLC4A9Q96Q91 983 aa31.2■■■□□ 2.59
SNF8-217ENST00000576353 RTF1Q92541 710 aaKnown RBP31.19■■■□□ 2.58
SNF8-217ENST00000576353 MSH5O43196 834 aa31.18■■■□□ 2.58
SNF8-217ENST00000576353 COL23A1Q86Y22 540 aaPredicted RBP31.18■■■□□ 2.58
SNF8-217ENST00000576353 PLEKHF1Q96S99 279 aa31.18■■■□□ 2.58
SNF8-217ENST00000576353 ADAMTS7Q9UKP4 1686 aa31.18■■■□□ 2.58
SNF8-217ENST00000576353 HTATSF1O43719 755 aaKnown RBP31.17■■■□□ 2.58
SNF8-217ENST00000576353 PTGER2P43116 358 aa31.16■■■□□ 2.58
SNF8-217ENST00000576353 CEMIPQ8WUJ3 1361 aa31.16■■■□□ 2.58
SNF8-217ENST00000576353 C4BP0C0L5 1744 aa31.15■■■□□ 2.58
SNF8-217ENST00000576353 QSER1Q2KHR3 1735 aa31.15■■■□□ 2.58
SNF8-217ENST00000576353 TAF1LQ8IZX4 1826 aa31.15■■■□□ 2.58
SNF8-217ENST00000576353 SLC39A6Q13433 755 aa31.15■■■□□ 2.58
SNF8-217ENST00000576353 RC3H1Q5TC82 1133 aaKnown RBP31.14■■■□□ 2.58
SNF8-217ENST00000576353 MAPK8IP3Q9UPT6 1336 aa31.14■■■□□ 2.58
SNF8-217ENST00000576353 GNPATO15228 680 aa31.13■■■□□ 2.57
SNF8-217ENST00000576353 SSFA2P28290 1259 aa31.13■■■□□ 2.57
SNF8-217ENST00000576353 TTC5Q8N0Z6 440 aa31.13■■■□□ 2.57
SNF8-217ENST00000576353 ZNF831Q5JPB2 1677 aa31.13■■■□□ 2.57
SNF8-217ENST00000576353 WDR43Q15061 677 aaKnown RBP eCLIP31.12■■■□□ 2.57
SNF8-217ENST00000576353 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.11■■■□□ 2.57
SNF8-217ENST00000576353 PHF14O94880 888 aa31.11■■■□□ 2.57
SNF8-217ENST00000576353 SGIP1Q9BQI5 828 aa31.11■■■□□ 2.57
SNF8-217ENST00000576353 CNTNAP4Q9C0A0 1308 aa31.11■■■□□ 2.57
SNF8-217ENST00000576353 MCM10Q7L590 875 aa31.1■■■□□ 2.57
SNF8-217ENST00000576353 POLD1P28340 1107 aa31.09■■■□□ 2.57
SNF8-217ENST00000576353 NFE2L2Q16236 605 aa31.09■■■□□ 2.57
SNF8-217ENST00000576353 RTCBQ9Y3I0 505 aaKnown RBP31.09■■■□□ 2.57
SNF8-217ENST00000576353 ZNF790Q6PG37 636 aa31.08■■■□□ 2.57
SNF8-217ENST00000576353 AMIGO3Q86WK7 504 aa31.08■■■□□ 2.57
SNF8-217ENST00000576353 VSIG10Q8N0Z9 540 aa31.08■■■□□ 2.57
SNF8-217ENST00000576353 TUBGCP6Q96RT7 1819 aa31.08■■■□□ 2.57
SNF8-217ENST00000576353 BTBD11A6QL63 1104 aa31.07■■■□□ 2.56
SNF8-217ENST00000576353 ARXQ96QS3 562 aa31.06■■■□□ 2.56
SNF8-217ENST00000576353 RPS6KA4O75676 772 aa31.05■■■□□ 2.56
SNF8-217ENST00000576353 CRKLP46109 303 aaKnown RBP31.05■■■□□ 2.56
SNF8-217ENST00000576353 DCTN1Q14203 1278 aa31.05■■■□□ 2.56
SNF8-217ENST00000576353 TRAPPC3LQ5T215 181 aa31.05■■■□□ 2.56
SNF8-217ENST00000576353 DNAJC10Q8IXB1 793 aa31.05■■■□□ 2.56
SNF8-217ENST00000576353 ADRA2BP18089 450 aa31.04■■■□□ 2.56
SNF8-217ENST00000576353 SMIM5Q71RC9 77 aa31.04■■■□□ 2.56
SNF8-217ENST00000576353 VIRMAQ69YN4 1812 aaKnown RBP31.03■■■□□ 2.56
SNF8-217ENST00000576353 ANP32CO43423 234 aa31.03■■■□□ 2.56
SNF8-217ENST00000576353 KCPQ6ZWJ8 1503 aa31.03■■■□□ 2.56
SNF8-217ENST00000576353 ADAMTS8Q9UP79 889 aa31.02■■■□□ 2.56
SNF8-217ENST00000576353 TAF7Q15545 349 aaPredicted RBP31.01■■■□□ 2.55
SNF8-217ENST00000576353 ZNF496Q96IT1 587 aaPredicted RBP31.01■■■□□ 2.55
SNF8-217ENST00000576353 FMNL2Q96PY5 1086 aa31.01■■■□□ 2.55
SNF8-217ENST00000576353 UBR3Q6ZT12 1888 aa31■■■□□ 2.55
SNF8-217ENST00000576353 CYP19A1P11511 503 aaPredicted RBP31■■■□□ 2.55
SNF8-217ENST00000576353 MSL1Q68DK7 614 aa31■■■□□ 2.55
SNF8-217ENST00000576353 RUNDC1Q96C34 613 aa31■■■□□ 2.55
SNF8-217ENST00000576353 TEX13AQ9BXU3 409 aaPredicted RBP31■■■□□ 2.55
SNF8-217ENST00000576353 INTS5Q6P9B9 1019 aaKnown RBP30.99■■■□□ 2.55
SNF8-217ENST00000576353 CCDC87Q9NVE4 849 aa30.99■■■□□ 2.55
SNF8-217ENST00000576353 CICQ96RK0 1608 aaPredicted RBP30.98■■■□□ 2.55
SNF8-217ENST00000576353 HEG1Q9ULI3 1381 aa30.98■■■□□ 2.55
SNF8-217ENST00000576353 STARD3NLO95772 234 aa30.98■■■□□ 2.55
SNF8-217ENST00000576353 RIPK4P57078 832 aa30.98■■■□□ 2.55
SNF8-217ENST00000576353 ARHGEF1Q92888 912 aaKnown RBP30.98■■■□□ 2.55
SNF8-217ENST00000576353 COL5A3P25940 1745 aaPredicted RBP30.98■■■□□ 2.55
SNF8-217ENST00000576353 RFC4P35249 363 aa30.97■■■□□ 2.55
SNF8-217ENST00000576353 TMPOP42166 694 aaKnown RBP30.97■■■□□ 2.55
SNF8-217ENST00000576353 CCDC146Q8IYE0 955 aa30.97■■■□□ 2.55
SNF8-217ENST00000576353 PNISRQ8TF01 805 aaKnown RBP30.97■■■□□ 2.55
SNF8-217ENST00000576353 FHDC1Q9C0D6 1143 aaPredicted RBP30.97■■■□□ 2.55
SNF8-217ENST00000576353 LMOD3Q0VAK6 560 aa30.96■■■□□ 2.55
SNF8-217ENST00000576353 SIPA1L3O60292 1781 aaPredicted RBP30.96■■■□□ 2.55
SNF8-217ENST00000576353 TJP1Q07157 1748 aa30.95■■■□□ 2.55
SNF8-217ENST00000576353 KCNQ3O43525 872 aa30.95■■■□□ 2.55
SNF8-217ENST00000576353 SYT17Q9BSW7 474 aa30.94■■■□□ 2.54
SNF8-217ENST00000576353 UBR2Q8IWV8 1755 aa30.93■■■□□ 2.54
SNF8-217ENST00000576353 THUMPD2Q9BTF0 503 aaKnown RBP30.92■■■□□ 2.54
SNF8-217ENST00000576353 COL24A1Q17RW2 1714 aa30.92■■■□□ 2.54
SNF8-217ENST00000576353 NLGN1Q8N2Q7 840 aa30.91■■■□□ 2.54
SNF8-217ENST00000576353 MYH14Q7Z406 1995 aaKnown RBP30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms