RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 CASZ1Q86V15 1759 aa10.52□□□□□ -0.72
CCDC40-215ENST00000576033 RNMTO43148 476 aaKnown RBP10.52□□□□□ -0.73
CCDC40-215ENST00000576033 FCHSD2O94868 740 aa10.52□□□□□ -0.73
CCDC40-215ENST00000576033 WDR43Q15061 677 aaKnown RBP eCLIP10.52□□□□□ -0.73
CCDC40-215ENST00000576033 SMIM5Q71RC9 77 aa10.52□□□□□ -0.73
CCDC40-215ENST00000576033 IL17REQ8NFR9 667 aa10.52□□□□□ -0.73
CCDC40-215ENST00000576033 C4BP0C0L5 1744 aa10.52□□□□□ -0.73
CCDC40-215ENST00000576033 SLC39A6Q13433 755 aa10.51□□□□□ -0.73
CCDC40-215ENST00000576033 TXNRD1Q16881 649 aa10.51□□□□□ -0.73
CCDC40-215ENST00000576033 ZNF827Q17R98 1081 aa10.51□□□□□ -0.73
CCDC40-215ENST00000576033 CCDC125Q86Z20 511 aa10.51□□□□□ -0.73
CCDC40-215ENST00000576033 NFATC2IPQ8NCF5 419 aa10.51□□□□□ -0.73
CCDC40-215ENST00000576033 DCAF5Q96JK2 942 aa10.51□□□□□ -0.73
CCDC40-215ENST00000576033 SLC4A9Q96Q91 983 aa10.51□□□□□ -0.73
CCDC40-215ENST00000576033 PDGFDQ9GZP0 370 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-215ENST00000576033 ATG3Q9NT62 314 aa10.51□□□□□ -0.73
CCDC40-215ENST00000576033 TMOD3Q9NYL9 352 aa10.51□□□□□ -0.73
CCDC40-215ENST00000576033 KCNQ3O43525 872 aa10.5□□□□□ -0.73
CCDC40-215ENST00000576033 AMIGO3Q86WK7 504 aa10.5□□□□□ -0.73
CCDC40-215ENST00000576033 GAS2L2Q8NHY3 880 aa10.5□□□□□ -0.73
CCDC40-215ENST00000576033 PNISRQ8TF01 805 aaKnown RBP10.5□□□□□ -0.73
CCDC40-215ENST00000576033 UBR3Q6ZT12 1888 aa10.5□□□□□ -0.73
CCDC40-215ENST00000576033 MAPK8IP3Q9UPT6 1336 aa10.5□□□□□ -0.73
CCDC40-215ENST00000576033 CICQ96RK0 1608 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-215ENST00000576033 CEMIPQ8WUJ3 1361 aa10.5□□□□□ -0.73
CCDC40-215ENST00000576033 C4AP0C0L4 1744 aa10.5□□□□□ -0.73
CCDC40-215ENST00000576033 MYH14Q7Z406 1995 aaKnown RBP10.49□□□□□ -0.73
CCDC40-215ENST00000576033 GNAT3A8MTJ3 354 aa10.49□□□□□ -0.73
CCDC40-215ENST00000576033 CCER2I3L3R5 266 aa10.49□□□□□ -0.73
CCDC40-215ENST00000576033 PLSCR1O15162 318 aa10.49□□□□□ -0.73
CCDC40-215ENST00000576033 MSH5O43196 834 aa10.49□□□□□ -0.73
CCDC40-215ENST00000576033 CABP4P57796 275 aa10.49□□□□□ -0.73
CCDC40-215ENST00000576033 ITPK1Q13572 414 aa10.49□□□□□ -0.73
CCDC40-215ENST00000576033 R3HDM1Q15032 1099 aaKnown RBP10.49□□□□□ -0.73
CCDC40-215ENST00000576033 NEUROD2Q15784 382 aa10.49□□□□□ -0.73
CCDC40-215ENST00000576033 NFE2L2Q16236 605 aa10.49□□□□□ -0.73
CCDC40-215ENST00000576033 SLC52A2Q9HAB3 445 aa10.49□□□□□ -0.73
CCDC40-215ENST00000576033 ZNF831Q5JPB2 1677 aa10.48□□□□□ -0.73
CCDC40-215ENST00000576033 QSER1Q2KHR3 1735 aa10.48□□□□□ -0.73
CCDC40-215ENST00000576033 FAM9BQ8IZU0 186 aa10.48□□□□□ -0.73
CCDC40-215ENST00000576033 LINC00116Q8NCU8 138 aa10.48□□□□□ -0.73
CCDC40-215ENST00000576033 MIS18AQ9NYP9 233 aa10.48□□□□□ -0.73
CCDC40-215ENST00000576033 CCNL1Q9UK58 526 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-215ENST00000576033 LAMB4A4D0S4 1761 aa10.47□□□□□ -0.73
CCDC40-215ENST00000576033 ERVV-2B6SEH9 535 aa10.47□□□□□ -0.73
CCDC40-215ENST00000576033 APAF1O14727 1248 aa10.47□□□□□ -0.73
CCDC40-215ENST00000576033 PTCD1O75127 700 aaKnown RBP10.47□□□□□ -0.73
CCDC40-215ENST00000576033 HSP90AB1P08238 724 aaKnown RBP10.47□□□□□ -0.73
CCDC40-215ENST00000576033 TMPOP42166 694 aaKnown RBP10.47□□□□□ -0.73
CCDC40-215ENST00000576033 RUNDC1Q96C34 613 aa10.47□□□□□ -0.73
CCDC40-215ENST00000576033 PRAMEF22A3QJZ6 481 aa10.46□□□□□ -0.73
CCDC40-215ENST00000576033 RIPK4P57078 832 aa10.46□□□□□ -0.73
CCDC40-215ENST00000576033 RBM42Q9BTD8 480 aaKnown RBP10.46□□□□□ -0.73
CCDC40-215ENST00000576033 TRIM35Q9UPQ4 493 aa10.46□□□□□ -0.73
CCDC40-215ENST00000576033 SALL2Q9Y467 1007 aaPredicted RBP10.46□□□□□ -0.73
CCDC40-215ENST00000576033 LOC102724428A0A0B4J2F2 783 aa10.45□□□□□ -0.74
CCDC40-215ENST00000576033 SIK1P57059 783 aa10.45□□□□□ -0.74
CCDC40-215ENST00000576033 TEFQ10587 303 aa10.44□□□□□ -0.74
CCDC40-215ENST00000576033 RTF1Q92541 710 aaKnown RBP10.44□□□□□ -0.74
CCDC40-215ENST00000576033 AKT1S1Q96B36 256 aa10.44□□□□□ -0.74
CCDC40-215ENST00000576033 PNPLA7Q6ZV29 1317 aa10.43□□□□□ -0.74
CCDC40-215ENST00000576033 ATP6V1AP38606 617 aa10.43□□□□□ -0.74
CCDC40-215ENST00000576033 PIP4K2AP48426 406 aaPredicted RBP10.43□□□□□ -0.74
CCDC40-215ENST00000576033 KRT24Q2M2I5 525 aa10.43□□□□□ -0.74
CCDC40-215ENST00000576033 DNAJC10Q8IXB1 793 aa10.43□□□□□ -0.74
CCDC40-215ENST00000576033 ZNF496Q96IT1 587 aaPredicted RBP10.43□□□□□ -0.74
CCDC40-215ENST00000576033 BTBD11A6QL63 1104 aa10.42□□□□□ -0.74
CCDC40-215ENST00000576033 PHF14O94880 888 aa10.42□□□□□ -0.74
CCDC40-215ENST00000576033 SLC15A2Q16348 729 aa10.42□□□□□ -0.74
CCDC40-215ENST00000576033 NEFMP07197 916 aa10.41□□□□□ -0.74
CCDC40-215ENST00000576033 SLC27A3Q5K4L6 730 aa10.41□□□□□ -0.74
CCDC40-215ENST00000576033 ZNF790Q6PG37 636 aa10.41□□□□□ -0.74
CCDC40-215ENST00000576033 SMARCC1Q92922 1105 aaPredicted RBP10.41□□□□□ -0.74
CCDC40-215ENST00000576033 STK32BQ9NY57 414 aa10.41□□□□□ -0.74
CCDC40-215ENST00000576033 LAS1LQ9Y4W2 734 aaKnown RBP10.41□□□□□ -0.74
CCDC40-215ENST00000576033 SCN7AQ01118 1682 aa10.41□□□□□ -0.74
CCDC40-215ENST00000576033 LRP5O75197 1615 aa10.4□□□□□ -0.74
CCDC40-215ENST00000576033 HEG1Q9ULI3 1381 aa10.4□□□□□ -0.74
CCDC40-215ENST00000576033 BCORQ6W2J9 1755 aa10.4□□□□□ -0.74
CCDC40-215ENST00000576033 ZBTB7AO95365 584 aa10.4□□□□□ -0.74
CCDC40-215ENST00000576033 COL24A1Q17RW2 1714 aa10.4□□□□□ -0.74
CCDC40-215ENST00000576033 GOLGB1Q14789 3259 aaKnown RBP10.4□□□□□ -0.74
CCDC40-215ENST00000576033 GNPATO15228 680 aa10.39□□□□□ -0.75
CCDC40-215ENST00000576033 HTATSF1O43719 755 aaKnown RBP10.39□□□□□ -0.75
CCDC40-215ENST00000576033 CENPBP07199 599 aaPredicted RBP10.39□□□□□ -0.75
CCDC40-215ENST00000576033 MSL1Q68DK7 614 aa10.39□□□□□ -0.75
CCDC40-215ENST00000576033 COL23A1Q86Y22 540 aaPredicted RBP10.39□□□□□ -0.75
CCDC40-215ENST00000576033 TTC5Q8N0Z6 440 aa10.39□□□□□ -0.75
CCDC40-215ENST00000576033 PNNQ9H307 717 aaKnown RBP10.39□□□□□ -0.75
CCDC40-215ENST00000576033 SPINK5Q9NQ38 1064 aaPredicted RBP10.39□□□□□ -0.75
CCDC40-215ENST00000576033 ZBTB1Q9Y2K1 713 aa10.39□□□□□ -0.75
CCDC40-215ENST00000576033 UTRNP46939 3433 aa10.38□□□□□ -0.75
CCDC40-215ENST00000576033 CRKLP46109 303 aaKnown RBP10.38□□□□□ -0.75
CCDC40-215ENST00000576033 TAF7Q15545 349 aaPredicted RBP10.38□□□□□ -0.75
CCDC40-215ENST00000576033 INTS5Q6P9B9 1019 aaKnown RBP10.38□□□□□ -0.75
CCDC40-215ENST00000576033 TSR2Q969E8 191 aaKnown RBP10.38□□□□□ -0.75
CCDC40-215ENST00000576033 AK7Q96M32 723 aa10.38□□□□□ -0.75
CCDC40-215ENST00000576033 TFCP2L1Q9NZI6 479 aa10.38□□□□□ -0.75
CCDC40-215ENST00000576033 TSPYL4Q9UJ04 414 aa10.38□□□□□ -0.75
CCDC40-215ENST00000576033 A1BGP04217 495 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms