RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	MAP3K5	Q99683	1374 aa		33.75	■■■□□ 2.99
SRRM2-223	ENST00000575701	RNMT	O43148	476 aa	Known RBP	33.74	■■■□□ 2.99
SRRM2-223	ENST00000575701	NFATC2IP	Q8NCF5	419 aa		33.73	■■■□□ 2.99
SRRM2-223	ENST00000575701	SPON1	Q9HCB6	807 aa		33.73	■■■□□ 2.99
SRRM2-223	ENST00000575701	TFCP2L1	Q9NZI6	479 aa		33.73	■■■□□ 2.99
SRRM2-223	ENST00000575701	GNAT3	A8MTJ3	354 aa		33.72	■■■□□ 2.99
SRRM2-223	ENST00000575701	SLC52A2	Q9HAB3	445 aa		33.72	■■■□□ 2.99
SRRM2-223	ENST00000575701	TUBGCP6	Q96RT7	1819 aa		33.72	■■■□□ 2.99
SRRM2-223	ENST00000575701	C4B	P0C0L5	1744 aa		33.71	■■■□□ 2.99
SRRM2-223	ENST00000575701	PHACTR3	Q96KR7	559 aa		33.71	■■■□□ 2.99
SRRM2-223	ENST00000575701	PRKRIP1	Q9H875	184 aa	Predicted RBP	33.71	■■■□□ 2.99
SRRM2-223	ENST00000575701	LGR6	Q9HBX8	967 aa		33.71	■■■□□ 2.99
SRRM2-223	ENST00000575701	NEFM	P07197	916 aa		33.69	■■■□□ 2.98
SRRM2-223	ENST00000575701	PDGFD	Q9GZP0	370 aa	Predicted RBP	33.69	■■■□□ 2.98
SRRM2-223	ENST00000575701	ATP6V1A	P38606	617 aa		33.68	■■■□□ 2.98
SRRM2-223	ENST00000575701	PNN	Q9H307	717 aa	Known RBP	33.68	■■■□□ 2.98
SRRM2-223	ENST00000575701	SRCAP	Q6ZRS2	3230 aa		33.68	■■■□□ 2.98
SRRM2-223	ENST00000575701	PNPLA7	Q6ZV29	1317 aa		33.67	■■■□□ 2.98
SRRM2-223	ENST00000575701	MTFR1L	Q9H019	292 aa		33.66	■■■□□ 2.98
SRRM2-223	ENST00000575701	SLC16A10	Q8TF71	515 aa		33.65	■■■□□ 2.98
SRRM2-223	ENST00000575701	AK7	Q96M32	723 aa		33.64	■■■□□ 2.98
SRRM2-223	ENST00000575701	RBM42	Q9BTD8	480 aa	Known RBP	33.64	■■■□□ 2.98
SRRM2-223	ENST00000575701	CIC	Q96RK0	1608 aa	Predicted RBP	33.64	■■■□□ 2.98
SRRM2-223	ENST00000575701	ZBTB7A	O95365	584 aa		33.63	■■■□□ 2.97
SRRM2-223	ENST00000575701	FLAD1	Q8NFF5	587 aa		33.63	■■■□□ 2.97
SRRM2-223	ENST00000575701	ITPK1	Q13572	414 aa		33.62	■■■□□ 2.97
SRRM2-223	ENST00000575701	CEMIP	Q8WUJ3	1361 aa		33.61	■■■□□ 2.97
SRRM2-223	ENST00000575701	TEF	Q10587	303 aa		33.61	■■■□□ 2.97
SRRM2-223	ENST00000575701	LINC00116	Q8NCU8	138 aa		33.61	■■■□□ 2.97
SRRM2-223	ENST00000575701	IL17RE	Q8NFR9	667 aa		33.61	■■■□□ 2.97
SRRM2-223	ENST00000575701	COL5A3	P25940	1745 aa	Predicted RBP	33.6	■■■□□ 2.97
SRRM2-223	ENST00000575701	SIPA1L3	O60292	1781 aa	Predicted RBP	33.6	■■■□□ 2.97
SRRM2-223	ENST00000575701	UBR3	Q6ZT12	1888 aa		33.59	■■■□□ 2.97
SRRM2-223	ENST00000575701	RTF1	Q92541	710 aa	Known RBP	33.59	■■■□□ 2.97
SRRM2-223	ENST00000575701	HTATSF1	O43719	755 aa	Known RBP	33.58	■■■□□ 2.97
SRRM2-223	ENST00000575701	PTCD1	O75127	700 aa	Known RBP	33.58	■■■□□ 2.97
SRRM2-223	ENST00000575701	SLC4A9	Q96Q91	983 aa		33.58	■■■□□ 2.97
SRRM2-223	ENST00000575701	PLEKHF1	Q96S99	279 aa		33.58	■■■□□ 2.97
SRRM2-223	ENST00000575701	MAPK8IP3	Q9UPT6	1336 aa		33.57	■■■□□ 2.97
SRRM2-223	ENST00000575701	PPP1R1B	Q9UD71	204 aa	Predicted RBP	33.56	■■■□□ 2.96
SRRM2-223	ENST00000575701	ATF5	Q9Y2D1	282 aa	Predicted RBP	33.56	■■■□□ 2.96
SRRM2-223	ENST00000575701	UBR2	Q8IWV8	1755 aa		33.55	■■■□□ 2.96
SRRM2-223	ENST00000575701	TJP1	Q07157	1748 aa		33.55	■■■□□ 2.96
SRRM2-223	ENST00000575701	COL24A1	Q17RW2	1714 aa		33.55	■■■□□ 2.96
SRRM2-223	ENST00000575701	KCP	Q6ZWJ8	1503 aa		33.54	■■■□□ 2.96
SRRM2-223	ENST00000575701	SSFA2	P28290	1259 aa		33.54	■■■□□ 2.96
SRRM2-223	ENST00000575701	COL23A1	Q86Y22	540 aa	Predicted RBP	33.54	■■■□□ 2.96
SRRM2-223	ENST00000575701	CNTNAP4	Q9C0A0	1308 aa		33.53	■■■□□ 2.96
SRRM2-223	ENST00000575701	PTGER2	P43116	358 aa		33.53	■■■□□ 2.96
SRRM2-223	ENST00000575701	RC3H1	Q5TC82	1133 aa	Known RBP	33.53	■■■□□ 2.96
SRRM2-223	ENST00000575701	MSH5	O43196	834 aa		33.52	■■■□□ 2.96
SRRM2-223	ENST00000575701	SLC39A6	Q13433	755 aa		33.52	■■■□□ 2.96
SRRM2-223	ENST00000575701	WDR43	Q15061	677 aa	Known RBP eCLIP	33.52	■■■□□ 2.96
SRRM2-223	ENST00000575701	TTC5	Q8N0Z6	440 aa		33.52	■■■□□ 2.96
SRRM2-223	ENST00000575701	GNPAT	O15228	680 aa		33.51	■■■□□ 2.95
SRRM2-223	ENST00000575701	DLG5	Q8TDM6	1919 aa		33.51	■■■□□ 2.95
SRRM2-223	ENST00000575701	NFE2L2	Q16236	605 aa		33.5	■■■□□ 2.95
SRRM2-223	ENST00000575701	VSIG10	Q8N0Z9	540 aa		33.5	■■■□□ 2.95
SRRM2-223	ENST00000575701	SGIP1	Q9BQI5	828 aa		33.5	■■■□□ 2.95
SRRM2-223	ENST00000575701	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.49	■■■□□ 2.95
SRRM2-223	ENST00000575701	ZNF790	Q6PG37	636 aa		33.47	■■■□□ 2.95
SRRM2-223	ENST00000575701	MCM10	Q7L590	875 aa		33.47	■■■□□ 2.95
SRRM2-223	ENST00000575701	RTCB	Q9Y3I0	505 aa	Known RBP	33.47	■■■□□ 2.95
SRRM2-223	ENST00000575701	PHF14	O94880	888 aa		33.46	■■■□□ 2.95
SRRM2-223	ENST00000575701	POLD1	P28340	1107 aa		33.46	■■■□□ 2.95
SRRM2-223	ENST00000575701	ADRA2B	P18089	450 aa		33.45	■■■□□ 2.95
SRRM2-223	ENST00000575701	AMIGO3	Q86WK7	504 aa		33.45	■■■□□ 2.95
SRRM2-223	ENST00000575701	BTBD11	A6QL63	1104 aa		33.44	■■■□□ 2.94
SRRM2-223	ENST00000575701	ANP32C	O43423	234 aa		33.43	■■■□□ 2.94
SRRM2-223	ENST00000575701	CRKL	P46109	303 aa	Known RBP	33.43	■■■□□ 2.94
SRRM2-223	ENST00000575701	MYH14	Q7Z406	1995 aa	Known RBP	33.42	■■■□□ 2.94
SRRM2-223	ENST00000575701	RPS6KA4	O75676	772 aa		33.42	■■■□□ 2.94
SRRM2-223	ENST00000575701	DNAJC10	Q8IXB1	793 aa		33.42	■■■□□ 2.94
SRRM2-223	ENST00000575701	DCTN1	Q14203	1278 aa		33.41	■■■□□ 2.94
SRRM2-223	ENST00000575701	ARX	Q96QS3	562 aa		33.41	■■■□□ 2.94
SRRM2-223	ENST00000575701	HEG1	Q9ULI3	1381 aa		33.4	■■■□□ 2.94
SRRM2-223	ENST00000575701	TRAPPC3L	Q5T215	181 aa		33.4	■■■□□ 2.94
SRRM2-223	ENST00000575701	FMNL2	Q96PY5	1086 aa		33.4	■■■□□ 2.94
SRRM2-223	ENST00000575701	RUNDC1	Q96C34	613 aa		33.39	■■■□□ 2.94
SRRM2-223	ENST00000575701	ZNF496	Q96IT1	587 aa	Predicted RBP	33.39	■■■□□ 2.94
SRRM2-223	ENST00000575701	ADAMTS8	Q9UP79	889 aa		33.39	■■■□□ 2.94
SRRM2-223	ENST00000575701	TEX13A	Q9BXU3	409 aa	Predicted RBP	33.38	■■■□□ 2.93
SRRM2-223	ENST00000575701	CYP19A1	P11511	503 aa	Predicted RBP	33.37	■■■□□ 2.93
SRRM2-223	ENST00000575701	LMOD3	Q0VAK6	560 aa		33.37	■■■□□ 2.93
SRRM2-223	ENST00000575701	TAF7	Q15545	349 aa	Predicted RBP	33.37	■■■□□ 2.93
SRRM2-223	ENST00000575701	CCDC87	Q9NVE4	849 aa		33.37	■■■□□ 2.93
SRRM2-223	ENST00000575701	SMIM5	Q71RC9	77 aa		33.36	■■■□□ 2.93
SRRM2-223	ENST00000575701	PNISR	Q8TF01	805 aa	Known RBP	33.36	■■■□□ 2.93
SRRM2-223	ENST00000575701	TMPO	P42166	694 aa	Known RBP	33.35	■■■□□ 2.93
SRRM2-223	ENST00000575701	RIPK4	P57078	832 aa		33.35	■■■□□ 2.93
SRRM2-223	ENST00000575701	INTS5	Q6P9B9	1019 aa	Known RBP	33.35	■■■□□ 2.93
SRRM2-223	ENST00000575701	C4A	P0C0L4	1744 aa		33.34	■■■□□ 2.93
SRRM2-223	ENST00000575701	STARD3NL	O95772	234 aa		33.34	■■■□□ 2.93
SRRM2-223	ENST00000575701	MSL1	Q68DK7	614 aa		33.34	■■■□□ 2.93
SRRM2-223	ENST00000575701	CCDC146	Q8IYE0	955 aa		33.34	■■■□□ 2.93
SRRM2-223	ENST00000575701	ARHGEF1	Q92888	912 aa	Known RBP	33.33	■■■□□ 2.93
SRRM2-223	ENST00000575701	RFC4	P35249	363 aa		33.32	■■■□□ 2.92
SRRM2-223	ENST00000575701	FHDC1	Q9C0D6	1143 aa	Predicted RBP	33.32	■■■□□ 2.92
SRRM2-223	ENST00000575701	KDM3B	Q7LBC6	1761 aa		33.32	■■■□□ 2.92
SRRM2-223	ENST00000575701	KCNQ3	O43525	872 aa		33.3	■■■□□ 2.92

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms