RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 SPG7Q9UQ90 795 aa8.51□□□□□ -1.05
SMG6-217ENST00000575338 ERBB3P21860 1342 aa8.51□□□□□ -1.05
SMG6-217ENST00000575338 PXDNQ92626 1479 aa8.51□□□□□ -1.05
SMG6-217ENST00000575338 NHSL1Q5SYE7 1610 aa8.51□□□□□ -1.05
SMG6-217ENST00000575338 HSP90AB1P08238 724 aaKnown RBP8.5□□□□□ -1.05
SMG6-217ENST00000575338 TATP17735 454 aaPredicted RBP8.5□□□□□ -1.05
SMG6-217ENST00000575338 SPATA31A3Q5VYP0 1347 aa8.5□□□□□ -1.05
SMG6-217ENST00000575338 ABCA3Q99758 1704 aa8.49□□□□□ -1.05
SMG6-217ENST00000575338 HDGFL1Q5TGJ6 251 aa8.49□□□□□ -1.05
SMG6-217ENST00000575338 ANKRD44Q8N8A2 993 aa8.49□□□□□ -1.05
SMG6-217ENST00000575338 IL17REQ8NFR9 667 aa8.49□□□□□ -1.05
SMG6-217ENST00000575338 RGS12O14924 1447 aa8.48□□□□□ -1.05
SMG6-217ENST00000575338 BTBD11A6QL63 1104 aa8.48□□□□□ -1.05
SMG6-217ENST00000575338 MSH5O43196 834 aa8.48□□□□□ -1.05
SMG6-217ENST00000575338 GNAI2P04899 355 aa8.48□□□□□ -1.05
SMG6-217ENST00000575338 XPCQ01831 940 aaPredicted RBP8.48□□□□□ -1.05
SMG6-217ENST00000575338 FLIIQ13045 1269 aa8.48□□□□□ -1.05
SMG6-217ENST00000575338 FKBP5Q13451 457 aaPredicted RBP8.48□□□□□ -1.05
SMG6-217ENST00000575338 BMP2KLQ5H9B9 411 aa8.48□□□□□ -1.05
SMG6-217ENST00000575338 LAMB4A4D0S4 1761 aa8.48□□□□□ -1.05
SMG6-217ENST00000575338 RNMTO43148 476 aaKnown RBP8.47□□□□□ -1.05
SMG6-217ENST00000575338 CSB-PGBD3P0DP91 1061 aa8.47□□□□□ -1.05
SMG6-217ENST00000575338 ANKRD45Q5TZF3 282 aa8.47□□□□□ -1.05
SMG6-217ENST00000575338 CASC1Q6TDU7 716 aa8.47□□□□□ -1.05
SMG6-217ENST00000575338 USHBP1Q8N6Y0 703 aa8.47□□□□□ -1.05
SMG6-217ENST00000575338 DCTPP1Q9H773 170 aa8.47□□□□□ -1.05
SMG6-217ENST00000575338 DDX58O95786 925 aaKnown RBP8.46□□□□□ -1.06
SMG6-217ENST00000575338 HSPA2P54652 639 aa8.46□□□□□ -1.06
SMG6-217ENST00000575338 EIF4A1P60842 406 aaKnown RBP8.46□□□□□ -1.06
SMG6-217ENST00000575338 ZC3H6P61129 1189 aaKnown RBP8.46□□□□□ -1.06
SMG6-217ENST00000575338 SLC4A10Q6U841 1118 aa8.46□□□□□ -1.06
SMG6-217ENST00000575338 IFNL2Q8IZJ0 200 aa8.46□□□□□ -1.06
SMG6-217ENST00000575338 LRRC59Q96AG4 307 aaKnown RBP8.46□□□□□ -1.06
SMG6-217ENST00000575338 MIS18AQ9NYP9 233 aa8.46□□□□□ -1.06
SMG6-217ENST00000575338 USP35Q9P2H5 1018 aa8.46□□□□□ -1.06
SMG6-217ENST00000575338 DBF4Q9UBU7 674 aaPredicted RBP8.46□□□□□ -1.06
SMG6-217ENST00000575338 SOS2Q07890 1332 aaPredicted RBP8.46□□□□□ -1.06
SMG6-217ENST00000575338 IBTKQ9P2D0 1353 aaPredicted RBP8.46□□□□□ -1.06
SMG6-217ENST00000575338 ATP10DQ9P241 1426 aa8.46□□□□□ -1.06
SMG6-217ENST00000575338 MRC1P22897 1456 aa8.45□□□□□ -1.06
SMG6-217ENST00000575338 AK9Q5TCS8 1911 aa8.45□□□□□ -1.06
SMG6-217ENST00000575338 KRT24Q2M2I5 525 aa8.45□□□□□ -1.06
SMG6-217ENST00000575338 RTL5Q5HYW3 569 aaPredicted RBP8.45□□□□□ -1.06
SMG6-217ENST00000575338 CEP85Q6P2H3 762 aa8.45□□□□□ -1.06
SMG6-217ENST00000575338 LNPKQ9C0E8 428 aa8.45□□□□□ -1.06
SMG6-217ENST00000575338 NLRP2Q9NX02 1062 aa8.45□□□□□ -1.06
SMG6-217ENST00000575338 HYPKQ9NX55 129 aa8.45□□□□□ -1.06
SMG6-217ENST00000575338 SLAIN2Q9P270 581 aa8.45□□□□□ -1.06
SMG6-217ENST00000575338 HSP90AB4PQ58FF6 505 aa8.44□□□□□ -1.06
SMG6-217ENST00000575338 BRINP3Q76B58 766 aa8.44□□□□□ -1.06
SMG6-217ENST00000575338 SKAP1Q86WV1 359 aa8.44□□□□□ -1.06
SMG6-217ENST00000575338 DCAF5Q96JK2 942 aa8.44□□□□□ -1.06
SMG6-217ENST00000575338 SRCIN1Q9C0H9 1055 aa8.44□□□□□ -1.06
SMG6-217ENST00000575338 ALDH1L1O75891 902 aa8.43□□□□□ -1.06
SMG6-217ENST00000575338 UBTFL1P0CB47 393 aaPredicted RBP8.43□□□□□ -1.06
SMG6-217ENST00000575338 MPRIPQ6WCQ1 1025 aa8.43□□□□□ -1.06
SMG6-217ENST00000575338 TTC5Q8N0Z6 440 aa8.43□□□□□ -1.06
SMG6-217ENST00000575338 IL27Q8NEV9 243 aa8.43□□□□□ -1.06
SMG6-217ENST00000575338 TBC1D32Q96NH3 1257 aa8.43□□□□□ -1.06
SMG6-217ENST00000575338 C1orf115Q9H7X2 142 aa8.43□□□□□ -1.06
SMG6-217ENST00000575338 AXIN2Q9Y2T1 843 aa8.43□□□□□ -1.06
SMG6-217ENST00000575338 WDR17Q8IZU2 1322 aa8.43□□□□□ -1.06
SMG6-217ENST00000575338 PCDH11XQ9BZA7 1347 aa8.43□□□□□ -1.06
SMG6-217ENST00000575338 PCDH11YQ9BZA8 1340 aa8.43□□□□□ -1.06
SMG6-217ENST00000575338 COL14A1Q05707 1796 aaKnown RBP8.43□□□□□ -1.06
SMG6-217ENST00000575338 RAB11FIP3O75154 756 aa8.42□□□□□ -1.06
SMG6-217ENST00000575338 CDC45O75419 566 aa8.42□□□□□ -1.06
SMG6-217ENST00000575338 PHKG2P15735 406 aa8.42□□□□□ -1.06
SMG6-217ENST00000575338 SIRT2Q8IXJ6 389 aa8.42□□□□□ -1.06
SMG6-217ENST00000575338 DNAAF4Q8WXU2 420 aa8.42□□□□□ -1.06
SMG6-217ENST00000575338 MEIS3Q99687 375 aa8.42□□□□□ -1.06
SMG6-217ENST00000575338 C22orf23Q9BZE7 217 aa8.42□□□□□ -1.06
SMG6-217ENST00000575338 SLC52A2Q9HAB3 445 aa8.42□□□□□ -1.06
SMG6-217ENST00000575338 LGR6Q9HBX8 967 aa8.42□□□□□ -1.06
SMG6-217ENST00000575338 PRDM11Q9NQV5 511 aa8.42□□□□□ -1.06
SMG6-217ENST00000575338 HEG1Q9ULI3 1381 aa8.42□□□□□ -1.06
SMG6-217ENST00000575338 AFDNP55196 1824 aaKnown RBP8.42□□□□□ -1.06
SMG6-217ENST00000575338 UBR2Q8IWV8 1755 aa8.41□□□□□ -1.06
SMG6-217ENST00000575338 C5P01031 1676 aa8.41□□□□□ -1.06
SMG6-217ENST00000575338 COL22A1Q8NFW1 1626 aaPredicted RBP8.41□□□□□ -1.06
SMG6-217ENST00000575338 MEGF6O75095 1541 aa8.41□□□□□ -1.06
SMG6-217ENST00000575338 COL5A2P05997 1499 aaPredicted RBP8.41□□□□□ -1.06
SMG6-217ENST00000575338 ERBB4Q15303 1308 aa8.41□□□□□ -1.06
SMG6-217ENST00000575338 GIGYF1O75420 1035 aaPredicted RBP8.41□□□□□ -1.06
SMG6-217ENST00000575338 EIF2S2P20042 333 aaKnown RBP8.41□□□□□ -1.06
SMG6-217ENST00000575338 ATP8B2P98198 1209 aa8.41□□□□□ -1.06
SMG6-217ENST00000575338 NEXNQ0ZGT2 675 aa8.41□□□□□ -1.06
SMG6-217ENST00000575338 G2E3Q7L622 706 aa8.41□□□□□ -1.06
SMG6-217ENST00000575338 DDX21Q9NR30 783 aaKnown RBP eCLIP8.41□□□□□ -1.06
SMG6-217ENST00000575338 TUBGCP6Q96RT7 1819 aa8.4□□□□□ -1.06
SMG6-217ENST00000575338 PLCH1Q4KWH8 1693 aa8.4□□□□□ -1.06
SMG6-217ENST00000575338 PAPPAQ13219 1627 aa8.4□□□□□ -1.06
SMG6-217ENST00000575338 AHDC1Q5TGY3 1603 aaPredicted RBP8.4□□□□□ -1.06
SMG6-217ENST00000575338 AOX1Q06278 1338 aa8.4□□□□□ -1.06
SMG6-217ENST00000575338 ZNF335Q9H4Z2 1342 aaPredicted RBP8.4□□□□□ -1.06
SMG6-217ENST00000575338 F6X3S4 739 aa8.4□□□□□ -1.06
SMG6-217ENST00000575338 PLEKHG5O94827 1062 aa8.4□□□□□ -1.06
SMG6-217ENST00000575338 TTC22Q5TAA0 569 aa8.4□□□□□ -1.06
SMG6-217ENST00000575338 ZNF790Q6PG37 636 aa8.4□□□□□ -1.06
SMG6-217ENST00000575338 KSR2Q6VAB6 950 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms