RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 BABAM1Q9NWV8 329 aa29.54■■■□□ 2.32
NPLOC4-217ENST00000574897 ATF3P18847 181 aa29.54■■■□□ 2.32
NPLOC4-217ENST00000574897 SMARCA5O60264 1052 aaPredicted RBP29.53■■■□□ 2.32
NPLOC4-217ENST00000574897 HDGFL1Q5TGJ6 251 aa29.53■■■□□ 2.32
NPLOC4-217ENST00000574897 OTUD7AQ8TE49 926 aaPredicted RBP29.53■■■□□ 2.32
NPLOC4-217ENST00000574897 NCAPD2Q15021 1401 aa29.52■■■□□ 2.32
NPLOC4-217ENST00000574897 BECN1Q14457 450 aa29.52■■■□□ 2.32
NPLOC4-217ENST00000574897 PLEKHM2Q8IWE5 1019 aa29.52■■■□□ 2.32
NPLOC4-217ENST00000574897 TBC1D2Q9BYX2 928 aa29.52■■■□□ 2.32
NPLOC4-217ENST00000574897 PHAXQ9H814 394 aaKnown RBP29.52■■■□□ 2.32
NPLOC4-217ENST00000574897 CAMTA1Q9Y6Y1 1673 aa29.52■■■□□ 2.32
NPLOC4-217ENST00000574897 PLEKHO1Q53GL0 409 aaPredicted RBP29.52■■■□□ 2.32
NPLOC4-217ENST00000574897 AKAP4Q5JQC9 854 aa29.52■■■□□ 2.32
NPLOC4-217ENST00000574897 EIF2S2P20042 333 aaKnown RBP29.51■■■□□ 2.31
NPLOC4-217ENST00000574897 GSPT1P15170 499 aaKnown RBP29.5■■■□□ 2.31
NPLOC4-217ENST00000574897 DEKP35659 375 aaKnown RBP29.5■■■□□ 2.31
NPLOC4-217ENST00000574897 EIF4A1P60842 406 aaKnown RBP29.5■■■□□ 2.31
NPLOC4-217ENST00000574897 NFKBIBQ15653 356 aa29.5■■■□□ 2.31
NPLOC4-217ENST00000574897 N4BP2Q86UW6 1770 aaPredicted RBP29.5■■■□□ 2.31
NPLOC4-217ENST00000574897 TEFQ10587 303 aa29.48■■■□□ 2.31
NPLOC4-217ENST00000574897 SLKQ9H2G2 1235 aaPredicted RBP29.48■■■□□ 2.31
NPLOC4-217ENST00000574897 TBC1D9Q6ZT07 1266 aa29.47■■■□□ 2.31
NPLOC4-217ENST00000574897 CABLES1Q8TDN4 633 aa29.47■■■□□ 2.31
NPLOC4-217ENST00000574897 SOS1Q07889 1333 aaPredicted RBP29.46■■■□□ 2.31
NPLOC4-217ENST00000574897 BTBD11A6QL63 1104 aa29.46■■■□□ 2.31
NPLOC4-217ENST00000574897 RNMTO43148 476 aaKnown RBP29.46■■■□□ 2.31
NPLOC4-217ENST00000574897 ERBB3P21860 1342 aa29.46■■■□□ 2.31
NPLOC4-217ENST00000574897 AMOTQ4VCS5 1084 aa29.45■■■□□ 2.31
NPLOC4-217ENST00000574897 C1orf141Q5JVX7 400 aa29.45■■■□□ 2.31
NPLOC4-217ENST00000574897 XIRP1Q702N8 1843 aaKnown RBP29.44■■■□□ 2.3
NPLOC4-217ENST00000574897 ANXA1P04083 346 aa29.44■■■□□ 2.3
NPLOC4-217ENST00000574897 GNAI2P04899 355 aa29.44■■■□□ 2.3
NPLOC4-217ENST00000574897 CHPF2Q9P2E5 772 aa29.44■■■□□ 2.3
NPLOC4-217ENST00000574897 USP35Q9P2H5 1018 aa29.43■■■□□ 2.3
NPLOC4-217ENST00000574897 SPRYD3Q8NCJ5 442 aa29.42■■■□□ 2.3
NPLOC4-217ENST00000574897 CRYBG1Q9Y4K1 1723 aa29.42■■■□□ 2.3
NPLOC4-217ENST00000574897 SIPA1L3O60292 1781 aaPredicted RBP29.42■■■□□ 2.3
NPLOC4-217ENST00000574897 TTC22Q5TAA0 569 aa29.41■■■□□ 2.3
NPLOC4-217ENST00000574897 EXOC6BQ9Y2D4 811 aa29.41■■■□□ 2.3
NPLOC4-217ENST00000574897 DCCP43146 1447 aa29.41■■■□□ 2.3
NPLOC4-217ENST00000574897 COL18A1P39060 1754 aa29.4■■■□□ 2.3
NPLOC4-217ENST00000574897 PNMA6EA0A0J9YXQ4 647 aa29.4■■■□□ 2.3
NPLOC4-217ENST00000574897 HMMRO75330 724 aa29.4■■■□□ 2.3
NPLOC4-217ENST00000574897 RBM25P49756 843 aaKnown RBP29.39■■■□□ 2.3
NPLOC4-217ENST00000574897 FRAT2O75474 233 aaPredicted RBP29.39■■■□□ 2.29
NPLOC4-217ENST00000574897 USP44Q9H0E7 712 aa29.39■■■□□ 2.29
NPLOC4-217ENST00000574897 LRRFIP2Q9Y608 721 aaKnown RBP29.39■■■□□ 2.29
NPLOC4-217ENST00000574897 NLRP2Q9NX02 1062 aa29.38■■■□□ 2.29
NPLOC4-217ENST00000574897 PXDNLA1KZ92 1463 aa29.38■■■□□ 2.29
NPLOC4-217ENST00000574897 GNAI3P08754 354 aa29.38■■■□□ 2.29
NPLOC4-217ENST00000574897 CHRNA2Q15822 529 aa29.38■■■□□ 2.29
NPLOC4-217ENST00000574897 PRAMEF22A3QJZ6 481 aa29.37■■■□□ 2.29
NPLOC4-217ENST00000574897 CDC45O75419 566 aa29.37■■■□□ 2.29
NPLOC4-217ENST00000574897 CADPS2Q86UW7 1296 aa29.37■■■□□ 2.29
NPLOC4-217ENST00000574897 ANTXR1Q9H6X2 564 aa29.37■■■□□ 2.29
NPLOC4-217ENST00000574897 NPHP3Q7Z494 1330 aa29.35■■■□□ 2.29
NPLOC4-217ENST00000574897 HOXB7P09629 217 aa29.34■■■□□ 2.29
NPLOC4-217ENST00000574897 ADAMTS7Q9UKP4 1686 aa29.34■■■□□ 2.29
NPLOC4-217ENST00000574897 TNS3Q68CZ2 1445 aa29.33■■■□□ 2.29
NPLOC4-217ENST00000574897 NCOA3Q9Y6Q9 1424 aa29.33■■■□□ 2.29
NPLOC4-217ENST00000574897 PI4KAP2A4QPH2 592 aa29.33■■■□□ 2.29
NPLOC4-217ENST00000574897 ATP8B2P98198 1209 aa29.33■■■□□ 2.29
NPLOC4-217ENST00000574897 PI4KAP1Q8N8J0 262 aa29.33■■■□□ 2.29
NPLOC4-217ENST00000574897 KIF2CQ99661 725 aa29.33■■■□□ 2.29
NPLOC4-217ENST00000574897 SCN11AQ9UI33 1791 aa29.32■■■□□ 2.28
NPLOC4-217ENST00000574897 MEGF6O75095 1541 aa29.32■■■□□ 2.28
NPLOC4-217ENST00000574897 SDSP20132 328 aa29.32■■■□□ 2.28
NPLOC4-217ENST00000574897 PROSER3Q2NL68 480 aa29.32■■■□□ 2.28
NPLOC4-217ENST00000574897 OVOS2A0A0G2JMS6 1433 aa29.31■■■□□ 2.28
NPLOC4-217ENST00000574897 UBTFL1P0CB47 393 aaPredicted RBP29.31■■■□□ 2.28
NPLOC4-217ENST00000574897 RAPGEF4Q8WZA2 1011 aa29.31■■■□□ 2.28
NPLOC4-217ENST00000574897 SRCIN1Q9C0H9 1055 aa29.31■■■□□ 2.28
NPLOC4-217ENST00000574897 GIGYF1O75420 1035 aaPredicted RBP29.3■■■□□ 2.28
NPLOC4-217ENST00000574897 TSHZ3Q63HK5 1081 aa29.3■■■□□ 2.28
NPLOC4-217ENST00000574897 STRCQ7RTU9 1775 aa29.3■■■□□ 2.28
NPLOC4-217ENST00000574897 ADCY9O60503 1353 aa29.29■■■□□ 2.28
NPLOC4-217ENST00000574897 CSB-PGBD3P0DP91 1061 aa29.29■■■□□ 2.28
NPLOC4-217ENST00000574897 SPATA31A3Q5VYP0 1347 aa29.29■■■□□ 2.28
NPLOC4-217ENST00000574897 DNAAF4Q8WXU2 420 aa29.28■■■□□ 2.28
NPLOC4-217ENST00000574897 KDM6AO15550 1401 aaPredicted RBP29.28■■■□□ 2.28
NPLOC4-217ENST00000574897 HEG1Q9ULI3 1381 aa29.28■■■□□ 2.28
NPLOC4-217ENST00000574897 NBPF7P0C2Y1 421 aaPredicted RBP29.27■■■□□ 2.28
NPLOC4-217ENST00000574897 SLC39A6Q13433 755 aa29.27■■■□□ 2.28
NPLOC4-217ENST00000574897 TUBGCP6Q96RT7 1819 aa29.27■■■□□ 2.28
NPLOC4-217ENST00000574897 BEND3Q5T5X7 828 aa29.27■■■□□ 2.28
NPLOC4-217ENST00000574897 PDE1AP54750 535 aa29.26■■■□□ 2.28
NPLOC4-217ENST00000574897 RBM42Q9BTD8 480 aaKnown RBP29.26■■■□□ 2.28
NPLOC4-217ENST00000574897 C5P01031 1676 aa29.26■■■□□ 2.27
NPLOC4-217ENST00000574897 HSCBQ8IWL3 235 aa29.25■■■□□ 2.27
NPLOC4-217ENST00000574897 LRRCC1Q9C099 1032 aa29.25■■■□□ 2.27
NPLOC4-217ENST00000574897 DBF4Q9UBU7 674 aaPredicted RBP29.25■■■□□ 2.27
NPLOC4-217ENST00000574897 IBTKQ9P2D0 1353 aaPredicted RBP29.25■■■□□ 2.27
NPLOC4-217ENST00000574897 TATP17735 454 aaPredicted RBP29.25■■■□□ 2.27
NPLOC4-217ENST00000574897 BRINP3Q76B58 766 aa29.25■■■□□ 2.27
NPLOC4-217ENST00000574897 CD2BP2O95400 341 aaKnown RBP29.24■■■□□ 2.27
NPLOC4-217ENST00000574897 PHKG2P15735 406 aa29.23■■■□□ 2.27
NPLOC4-217ENST00000574897 SALL3Q9BXA9 1300 aa29.23■■■□□ 2.27
NPLOC4-217ENST00000574897 PPP1R42Q7Z4L9 355 aa29.23■■■□□ 2.27
NPLOC4-217ENST00000574897 LMTK3Q96Q04 1460 aa29.21■■■□□ 2.27
NPLOC4-217ENST00000574897 NFATC2IPQ8NCF5 419 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms