RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 MPRIPQ6WCQ1 1025 aa13.07□□□□□ -0.32
NDE1-210ENST00000574163 GAS2L2Q8NHY3 880 aa13.07□□□□□ -0.32
NDE1-210ENST00000574163 PIGBQ92521 554 aa13.07□□□□□ -0.32
NDE1-210ENST00000574163 SRCAPQ6ZRS2 3230 aa13.06□□□□□ -0.32
NDE1-210ENST00000574163 FCHSD2O94868 740 aa13.06□□□□□ -0.32
NDE1-210ENST00000574163 U2AF1L5P0DN76 240 aaPredicted RBP13.06□□□□□ -0.32
NDE1-210ENST00000574163 U2AF1Q01081 240 aaKnown RBP eCLIP13.06□□□□□ -0.32
NDE1-210ENST00000574163 R3HDM1Q15032 1099 aaKnown RBP13.06□□□□□ -0.32
NDE1-210ENST00000574163 PRKRIP1Q9H875 184 aaPredicted RBP13.06□□□□□ -0.32
NDE1-210ENST00000574163 C4BP0C0L5 1744 aa13.05□□□□□ -0.32
NDE1-210ENST00000574163 UBR2Q8IWV8 1755 aa13.05□□□□□ -0.32
NDE1-210ENST00000574163 PSDA5PKW4 1024 aaPredicted RBP13.05□□□□□ -0.32
NDE1-210ENST00000574163 PRKAR2BP31323 418 aa13.05□□□□□ -0.32
NDE1-210ENST00000574163 MTHFSDQ2M296 383 aaKnown RBP13.05□□□□□ -0.32
NDE1-210ENST00000574163 LRRC4BQ9NT99 713 aa13.05□□□□□ -0.32
NDE1-210ENST00000574163 STK32BQ9NY57 414 aa13.05□□□□□ -0.32
NDE1-210ENST00000574163 COL5A3P25940 1745 aaPredicted RBP13.05□□□□□ -0.32
NDE1-210ENST00000574163 CCNL1Q9UK58 526 aaPredicted RBP13.04□□□□□ -0.32
NDE1-210ENST00000574163 ATF5Q9Y2D1 282 aaPredicted RBP13.04□□□□□ -0.32
NDE1-210ENST00000574163 DLG5Q8TDM6 1919 aa13.03□□□□□ -0.32
NDE1-210ENST00000574163 CABP4P57796 275 aa13.03□□□□□ -0.32
NDE1-210ENST00000574163 SLC15A2Q16348 729 aa13.03□□□□□ -0.32
NDE1-210ENST00000574163 UBR3Q6ZT12 1888 aa13.03□□□□□ -0.32
NDE1-210ENST00000574163 CEMIPQ8WUJ3 1361 aa13.03□□□□□ -0.32
NDE1-210ENST00000574163 COL24A1Q17RW2 1714 aa13.02□□□□□ -0.32
NDE1-210ENST00000574163 RNMTO43148 476 aaKnown RBP13.02□□□□□ -0.33
NDE1-210ENST00000574163 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
NDE1-210ENST00000574163 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
NDE1-210ENST00000574163 PNNQ9H307 717 aaKnown RBP13.02□□□□□ -0.33
NDE1-210ENST00000574163 TJP1Q07157 1748 aa13.02□□□□□ -0.33
NDE1-210ENST00000574163 LOC102724428A0A0B4J2F2 783 aa13.01□□□□□ -0.33
NDE1-210ENST00000574163 GNAT3A8MTJ3 354 aa13.01□□□□□ -0.33
NDE1-210ENST00000574163 SIK1P57059 783 aa13.01□□□□□ -0.33
NDE1-210ENST00000574163 ZNF827Q17R98 1081 aa13.01□□□□□ -0.33
NDE1-210ENST00000574163 SLC52A2Q9HAB3 445 aa13.01□□□□□ -0.33
NDE1-210ENST00000574163 ATG3Q9NT62 314 aa13.01□□□□□ -0.33
NDE1-210ENST00000574163 ASAP1Q9ULH1 1129 aa13.01□□□□□ -0.33
NDE1-210ENST00000574163 KCPQ6ZWJ8 1503 aa13□□□□□ -0.33
NDE1-210ENST00000574163 NEFMP07197 916 aa13□□□□□ -0.33
NDE1-210ENST00000574163 PHACTR3Q96KR7 559 aa13□□□□□ -0.33
NDE1-210ENST00000574163 HTATSF1O43719 755 aaKnown RBP12.99□□□□□ -0.33
NDE1-210ENST00000574163 POTEDQ86YR6 584 aa12.99□□□□□ -0.33
NDE1-210ENST00000574163 PLEKHF1Q96S99 279 aa12.99□□□□□ -0.33
NDE1-210ENST00000574163 MAPK8IP3Q9UPT6 1336 aa12.98□□□□□ -0.33
NDE1-210ENST00000574163 NFATC2IPQ8NCF5 419 aa12.98□□□□□ -0.33
NDE1-210ENST00000574163 KCNQ4P56696 695 aa12.97□□□□□ -0.33
NDE1-210ENST00000574163 TEFQ10587 303 aa12.97□□□□□ -0.33
NDE1-210ENST00000574163 LGR6Q9HBX8 967 aa12.97□□□□□ -0.33
NDE1-210ENST00000574163 PNPLA7Q6ZV29 1317 aa12.96□□□□□ -0.33
NDE1-210ENST00000574163 CNTNAP4Q9C0A0 1308 aa12.96□□□□□ -0.33
NDE1-210ENST00000574163 WDR43Q15061 677 aaKnown RBP eCLIP12.96□□□□□ -0.33
NDE1-210ENST00000574163 NFE2L2Q16236 605 aa12.96□□□□□ -0.33
NDE1-210ENST00000574163 IL17REQ8NFR9 667 aa12.96□□□□□ -0.33
NDE1-210ENST00000574163 SLC16A10Q8TF71 515 aa12.96□□□□□ -0.33
NDE1-210ENST00000574163 RTF1Q92541 710 aaKnown RBP12.96□□□□□ -0.33
NDE1-210ENST00000574163 SPON1Q9HCB6 807 aa12.96□□□□□ -0.33
NDE1-210ENST00000574163 TFCP2L1Q9NZI6 479 aa12.96□□□□□ -0.33
NDE1-210ENST00000574163 KDM3BQ7LBC6 1761 aa12.96□□□□□ -0.34
NDE1-210ENST00000574163 MYH14Q7Z406 1995 aaKnown RBP12.96□□□□□ -0.34
NDE1-210ENST00000574163 ATP6V1AP38606 617 aa12.95□□□□□ -0.34
NDE1-210ENST00000574163 ITPK1Q13572 414 aa12.95□□□□□ -0.34
NDE1-210ENST00000574163 LINC00116Q8NCU8 138 aa12.95□□□□□ -0.34
NDE1-210ENST00000574163 FLAD1Q8NFF5 587 aa12.95□□□□□ -0.34
NDE1-210ENST00000574163 AK7Q96M32 723 aa12.95□□□□□ -0.34
NDE1-210ENST00000574163 MTFR1LQ9H019 292 aa12.95□□□□□ -0.34
NDE1-210ENST00000574163 C4AP0C0L4 1744 aa12.95□□□□□ -0.34
NDE1-210ENST00000574163 ANP32CO43423 234 aa12.94□□□□□ -0.34
NDE1-210ENST00000574163 RC3H1Q5TC82 1133 aaKnown RBP12.94□□□□□ -0.34
NDE1-210ENST00000574163 SLC4A9Q96Q91 983 aa12.94□□□□□ -0.34
NDE1-210ENST00000574163 RBM42Q9BTD8 480 aaKnown RBP12.94□□□□□ -0.34
NDE1-210ENST00000574163 SSFA2P28290 1259 aa12.93□□□□□ -0.34
NDE1-210ENST00000574163 VSIG10Q8N0Z9 540 aa12.93□□□□□ -0.34
NDE1-210ENST00000574163 PDGFDQ9GZP0 370 aaPredicted RBP12.93□□□□□ -0.34
NDE1-210ENST00000574163 LAMB4A4D0S4 1761 aa12.93□□□□□ -0.34
NDE1-210ENST00000574163 PTCD1O75127 700 aaKnown RBP12.92□□□□□ -0.34
NDE1-210ENST00000574163 LMOD3Q0VAK6 560 aa12.92□□□□□ -0.34
NDE1-210ENST00000574163 TTC5Q8N0Z6 440 aa12.92□□□□□ -0.34
NDE1-210ENST00000574163 GNPATO15228 680 aa12.91□□□□□ -0.34
NDE1-210ENST00000574163 ZBTB7AO95365 584 aa12.91□□□□□ -0.34
NDE1-210ENST00000574163 ZNF790Q6PG37 636 aa12.91□□□□□ -0.34
NDE1-210ENST00000574163 RUNDC1Q96C34 613 aa12.91□□□□□ -0.34
NDE1-210ENST00000574163 HEG1Q9ULI3 1381 aa12.91□□□□□ -0.34
NDE1-210ENST00000574163 PTGER2P43116 358 aa12.9□□□□□ -0.34
NDE1-210ENST00000574163 SLC39A6Q13433 755 aa12.9□□□□□ -0.34
NDE1-210ENST00000574163 MCM10Q7L590 875 aa12.9□□□□□ -0.34
NDE1-210ENST00000574163 SGIP1Q9BQI5 828 aa12.9□□□□□ -0.34
NDE1-210ENST00000574163 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.89□□□□□ -0.35
NDE1-210ENST00000574163 TMPOP42166 694 aaKnown RBP12.89□□□□□ -0.35
NDE1-210ENST00000574163 CRKLP46109 303 aaKnown RBP12.89□□□□□ -0.35
NDE1-210ENST00000574163 COL23A1Q86Y22 540 aaPredicted RBP12.89□□□□□ -0.35
NDE1-210ENST00000574163 PNISRQ8TF01 805 aaKnown RBP12.89□□□□□ -0.35
NDE1-210ENST00000574163 FMNL2Q96PY5 1086 aa12.89□□□□□ -0.35
NDE1-210ENST00000574163 ADAMTS8Q9UP79 889 aa12.89□□□□□ -0.35
NDE1-210ENST00000574163 BTBD11A6QL63 1104 aa12.88□□□□□ -0.35
NDE1-210ENST00000574163 RPS6KA4O75676 772 aa12.88□□□□□ -0.35
NDE1-210ENST00000574163 AMIGO3Q86WK7 504 aa12.88□□□□□ -0.35
NDE1-210ENST00000574163 ZNF496Q96IT1 587 aaPredicted RBP12.88□□□□□ -0.35
NDE1-210ENST00000574163 TEX13AQ9BXU3 409 aaPredicted RBP12.88□□□□□ -0.35
NDE1-210ENST00000574163 CCDC87Q9NVE4 849 aa12.88□□□□□ -0.35
NDE1-210ENST00000574163 RTCBQ9Y3I0 505 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 1107.1 ms