RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 CFAP100Q494V2 611 aa18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 CYP46A1Q9Y6A2 500 aa18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 RPUSD2Q8IZ73 545 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 FBF1Q8TES7 1133 aa18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 FSD2A1L4K1 749 aa18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 KANK4Q5T7N3 995 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 CIZ1Q9ULV3 898 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 ERCC5P28715 1186 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 SOGA1O94964 1423 aa18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 CWC27Q6UX04 472 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 PDCP20941 246 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 CUL5Q93034 780 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 SEPT10Q9P0V9 454 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 SMG6Q86US8 1419 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 PHLDB1Q86UU1 1377 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 HIP1O00291 1037 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 CKAP2LQ8IYA6 745 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 MTHFSP49914 203 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 LARP1BQ659C4 914 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 SLU7O95391 586 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 CCDC192P0DO97 292 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 SYCP3Q8IZU3 236 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 SMC1BQ8NDV3 1235 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 GPRASP1Q5JY77 1395 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 NOP2P46087 812 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 GTPBP4Q9BZE4 634 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 MAP7D1Q3KQU3 841 aa18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 TDRD12Q587J7 1177 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-202ENST00000573710 PLEKHO1Q53GL0 409 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 TSG101Q99816 390 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 IGHMBP2P38935 993 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 CPLX3Q8WVH0 158 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 PRC1O43663 620 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 TCERG1LQ5VWI1 586 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 CCDC144CPQ8IYA2 1237 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 PFDN4Q9NQP4 134 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 BIN2Q9UBW5 565 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 IKBKGQ9Y6K9 419 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 SEPT14Q6ZU15 432 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 AACSQ86V21 672 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 CBFA2T2O43439 604 aa18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 PDE1CQ14123 709 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-202ENST00000573710 EP400NLQ6ZTU2 488 aa18.39■□□□□ 0.53
CACNA1A-202ENST00000573710 CCDC144AA2RUR9 1427 aa18.39■□□□□ 0.53
CACNA1A-202ENST00000573710 GUCY1B3Q02153 619 aa18.39■□□□□ 0.53
CACNA1A-202ENST00000573710 MTERF4Q7Z6M4 381 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-202ENST00000573710 TAF12Q16514 161 aa18.39■□□□□ 0.53
CACNA1A-202ENST00000573710 PPP4R4Q6NUP7 873 aa18.39■□□□□ 0.53
CACNA1A-202ENST00000573710 RUNDC1Q96C34 613 aa18.39■□□□□ 0.53
CACNA1A-202ENST00000573710 FAM212AQ96EL1 285 aa18.39■□□□□ 0.53
CACNA1A-202ENST00000573710 C11orf95C9JLR9 678 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 KIF5CO60282 957 aa18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 ADAMTS2O95450 1211 aa18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 BIRC2Q13490 618 aa18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 MAATS1Q7Z4T9 603 aa18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 BRPF3Q9ULD4 1205 aa18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 GNL1P36915 607 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 FEZ2Q9UHY8 353 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 AIDAQ96BJ3 306 aa18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 PPP2R5CQ13362 524 aa18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 WHAMMQ8TF30 809 aa18.38■□□□□ 0.53
CACNA1A-202ENST00000573710 GJC1P36383 396 aa18.37■□□□□ 0.53
CACNA1A-202ENST00000573710 C6orf163Q5TEZ5 329 aa18.37■□□□□ 0.53
CACNA1A-202ENST00000573710 SPATA32Q96LK8 384 aa18.37■□□□□ 0.53
CACNA1A-202ENST00000573710 PLS1Q14651 629 aa18.37■□□□□ 0.53
CACNA1A-202ENST00000573710 NLRP5P59047 1200 aa18.37■□□□□ 0.53
CACNA1A-202ENST00000573710 GNAI2P04899 355 aa18.37■□□□□ 0.53
CACNA1A-202ENST00000573710 FAM69CQ0P6D2 419 aa18.37■□□□□ 0.53
CACNA1A-202ENST00000573710 UPF3BQ9BZI7 483 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-202ENST00000573710 RANBP6O60518 1105 aaKnown RBP18.36■□□□□ 0.53
CACNA1A-202ENST00000573710 ZSCAN25Q6NSZ9 544 aa18.36■□□□□ 0.53
CACNA1A-202ENST00000573710 PRKCSHP14314 528 aaPredicted RBP18.36■□□□□ 0.53
CACNA1A-202ENST00000573710 TMEM132EQ6IEE7 984 aa18.36■□□□□ 0.53
CACNA1A-202ENST00000573710 FKBP15Q5T1M5 1219 aa18.36■□□□□ 0.53
CACNA1A-202ENST00000573710 ISM2Q6H9L7 571 aa18.36■□□□□ 0.53
CACNA1A-202ENST00000573710 TMEM110-MUSTN1A8MSY1 372 aa18.35■□□□□ 0.53
CACNA1A-202ENST00000573710 HDGFL1Q5TGJ6 251 aa18.35■□□□□ 0.53
CACNA1A-202ENST00000573710 RPGRQ92834 1020 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-202ENST00000573710 DACT3Q96B18 629 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-202ENST00000573710 TRMT1Q9NXH9 659 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-202ENST00000573710 SLC4A2P04920 1241 aa18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 METTL24Q5JXM2 366 aa18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 MICALCLQ6ZW33 695 aa18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 LRRC43Q8N309 656 aa18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 NUP88Q99567 741 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 HAUS7Q99871 368 aa18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 PTCD1O75127 700 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 ZNF444Q8N0Y2 327 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 PPME1Q9Y570 386 aa18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 ZNF622Q969S3 477 aaKnown RBP eCLIP18.34■□□□□ 0.53
CACNA1A-202ENST00000573710 BCAR3O75815 825 aa18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 KIF4BQ2VIQ3 1234 aa18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 CDKL5O76039 1030 aa18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 GEN1Q17RS7 908 aa18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 JAKMIP1Q96N16 626 aaKnown RBP18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 FERMT1Q9BQL6 677 aa18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 URI1O94763 535 aaPredicted RBP18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 AKNAD1Q5T1N1 836 aa18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 VPS36Q86VN1 386 aa18.33■□□□□ 0.53
CACNA1A-202ENST00000573710 UBXN4Q92575 508 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms