RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 LIG1P18858 919 aa12.65□□□□□ -0.38
CHRNB1-205ENST00000573209 CHAF1AQ13111 956 aaPredicted RBP12.65□□□□□ -0.38
CHRNB1-205ENST00000573209 SWT1Q5T5J6 900 aaKnown RBP12.65□□□□□ -0.38
CHRNB1-205ENST00000573209 PANK1Q8TE04 598 aa12.65□□□□□ -0.38
CHRNB1-205ENST00000573209 PIBF1Q8WXW3 757 aa12.65□□□□□ -0.38
CHRNB1-205ENST00000573209 TBC1D32Q96NH3 1257 aa12.65□□□□□ -0.38
CHRNB1-205ENST00000573209 NBPF3Q9H094 633 aa12.65□□□□□ -0.38
CHRNB1-205ENST00000573209 CIZ1Q9ULV3 898 aaPredicted RBP12.65□□□□□ -0.38
CHRNB1-205ENST00000573209 GSCP56915 257 aaPredicted RBP12.65□□□□□ -0.38
CHRNB1-205ENST00000573209 TCP11L2Q8N4U5 519 aa12.65□□□□□ -0.38
CHRNB1-205ENST00000573209 DEF6Q9H4E7 631 aa12.65□□□□□ -0.38
CHRNB1-205ENST00000573209 CT47B1P0C2W7 299 aaPredicted RBP12.64□□□□□ -0.39
CHRNB1-205ENST00000573209 DNAJC21Q5F1R6 531 aaKnown RBP12.64□□□□□ -0.39
CHRNB1-205ENST00000573209 BORCS6Q96GS4 357 aa12.64□□□□□ -0.39
CHRNB1-205ENST00000573209 NOL10Q9BSC4 688 aaKnown RBP12.64□□□□□ -0.39
CHRNB1-205ENST00000573209 TOMM22Q9NS69 142 aa12.64□□□□□ -0.39
CHRNB1-205ENST00000573209 NCOA3Q9Y6Q9 1424 aa12.64□□□□□ -0.39
CHRNB1-205ENST00000573209 FKBP5Q13451 457 aaPredicted RBP12.64□□□□□ -0.39
CHRNB1-205ENST00000573209 C11orf91Q3C1V1 193 aa12.64□□□□□ -0.39
CHRNB1-205ENST00000573209 KIF20BQ96Q89 1820 aa12.64□□□□□ -0.39
CHRNB1-205ENST00000573209 KLHL40Q2TBA0 621 aa12.63□□□□□ -0.39
CHRNB1-205ENST00000573209 ATP2B1P20020 1258 aa12.63□□□□□ -0.39
CHRNB1-205ENST00000573209 CWC22Q9HCG8 908 aaKnown RBP12.63□□□□□ -0.39
CHRNB1-205ENST00000573209 TNNT1P13805 278 aa12.62□□□□□ -0.39
CHRNB1-205ENST00000573209 SRPK2P78362 688 aaKnown RBP12.62□□□□□ -0.39
CHRNB1-205ENST00000573209 MTA1Q13330 715 aa12.62□□□□□ -0.39
CHRNB1-205ENST00000573209 BIRC2Q13490 618 aa12.62□□□□□ -0.39
CHRNB1-205ENST00000573209 SLC12A5Q9H2X9 1139 aa12.62□□□□□ -0.39
CHRNB1-205ENST00000573209 TRAK1Q9UPV9 953 aa12.62□□□□□ -0.39
CHRNB1-205ENST00000573209 EVC2Q86UK5 1308 aa12.62□□□□□ -0.39
CHRNB1-205ENST00000573209 MED14O60244 1454 aa12.62□□□□□ -0.39
CHRNB1-205ENST00000573209 MYO5BQ9ULV0 1848 aa12.62□□□□□ -0.39
CHRNB1-205ENST00000573209 A0A1B0GUL7 405 aa12.62□□□□□ -0.39
CHRNB1-205ENST00000573209 ATP6V1AP38606 617 aa12.62□□□□□ -0.39
CHRNB1-205ENST00000573209 PAIP2Q9BPZ3 127 aaKnown RBP12.62□□□□□ -0.39
CHRNB1-205ENST00000573209 ZNF692Q9BU19 519 aaPredicted RBP12.62□□□□□ -0.39
CHRNB1-205ENST00000573209 NOLC1Q14978 699 aaKnown RBP eCLIP12.61□□□□□ -0.39
CHRNB1-205ENST00000573209 RWDD1Q9H446 243 aaPredicted RBP12.61□□□□□ -0.39
CHRNB1-205ENST00000573209 ARHGAP31Q2M1Z3 1444 aa12.61□□□□□ -0.39
CHRNB1-205ENST00000573209 COL3A1P02461 1466 aaPredicted RBP12.61□□□□□ -0.39
CHRNB1-205ENST00000573209 MTHFSP49914 203 aa12.61□□□□□ -0.39
CHRNB1-205ENST00000573209 RPAINQ86UA6 219 aa12.61□□□□□ -0.39
CHRNB1-205ENST00000573209 KIF18AQ8NI77 898 aa12.61□□□□□ -0.39
CHRNB1-205ENST00000573209 TNPO1Q92973 898 aaKnown RBP12.61□□□□□ -0.39
CHRNB1-205ENST00000573209 SPTLC3Q9NUV7 552 aa12.61□□□□□ -0.39
CHRNB1-205ENST00000573209 ZFYVE9O95405 1425 aa12.6□□□□□ -0.39
CHRNB1-205ENST00000573209 FAM177BA6PVY3 158 aa12.6□□□□□ -0.39
CHRNB1-205ENST00000573209 MYO1CO00159 1063 aa12.6□□□□□ -0.39
CHRNB1-205ENST00000573209 ANKRD23Q86SG2 305 aa12.6□□□□□ -0.39
CHRNB1-205ENST00000573209 DRC1Q96MC2 740 aa12.6□□□□□ -0.39
CHRNB1-205ENST00000573209 NEO1Q92859 1461 aa12.6□□□□□ -0.39
CHRNB1-205ENST00000573209 CCDC96Q2M329 555 aa12.59□□□□□ -0.39
CHRNB1-205ENST00000573209 ABCC11Q96J66 1382 aa12.59□□□□□ -0.39
CHRNB1-205ENST00000573209 POLKQ9UBT6 870 aa12.59□□□□□ -0.39
CHRNB1-205ENST00000573209 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.59□□□□□ -0.39
CHRNB1-205ENST00000573209 CDC42BPGQ6DT37 1551 aa12.59□□□□□ -0.39
CHRNB1-205ENST00000573209 CTAGE5O15320 804 aa12.59□□□□□ -0.39
CHRNB1-205ENST00000573209 CHGAP10645 457 aaKnown RBP12.59□□□□□ -0.39
CHRNB1-205ENST00000573209 DDIT3P35638 169 aa12.59□□□□□ -0.39
CHRNB1-205ENST00000573209 MVPQ14764 893 aaKnown RBP12.59□□□□□ -0.39
CHRNB1-205ENST00000573209 NOM1Q5C9Z4 860 aaKnown RBP12.59□□□□□ -0.39
CHRNB1-205ENST00000573209 RRP7AQ9Y3A4 280 aaKnown RBP12.59□□□□□ -0.39
CHRNB1-205ENST00000573209 PCDHB15Q9Y5E8 787 aa12.59□□□□□ -0.39
CHRNB1-205ENST00000573209 DIP2CQ9Y2E4 1556 aa12.59□□□□□ -0.39
CHRNB1-205ENST00000573209 RLBP1P12271 317 aa12.58□□□□□ -0.4
CHRNB1-205ENST00000573209 NEUROD2Q15784 382 aa12.58□□□□□ -0.4
CHRNB1-205ENST00000573209 ZC3H12AQ5D1E8 599 aaKnown RBP12.58□□□□□ -0.4
CHRNB1-205ENST00000573209 TXLNBQ8N3L3 684 aa12.58□□□□□ -0.4
CHRNB1-205ENST00000573209 CWC15Q9P013 229 aaKnown RBP12.58□□□□□ -0.4
CHRNB1-205ENST00000573209 SEC24BO95487 1268 aa12.58□□□□□ -0.4
CHRNB1-205ENST00000573209 GYS2P54840 703 aa12.58□□□□□ -0.4
CHRNB1-205ENST00000573209 ZKSCAN2Q63HK3 967 aa12.58□□□□□ -0.4
CHRNB1-205ENST00000573209 C10orf67Q8IYJ2 551 aa12.58□□□□□ -0.4
CHRNB1-205ENST00000573209 SPRYD3Q8NCJ5 442 aa12.58□□□□□ -0.4
CHRNB1-205ENST00000573209 TBC1D22AQ8WUA7 517 aa12.58□□□□□ -0.4
CHRNB1-205ENST00000573209 FAM53CQ9NYF3 392 aa12.58□□□□□ -0.4
CHRNB1-205ENST00000573209 PDZRN3Q9UPQ7 1066 aa12.58□□□□□ -0.4
CHRNB1-205ENST00000573209 PAXBP1Q9Y5B6 917 aa12.58□□□□□ -0.4
CHRNB1-205ENST00000573209 PREX1Q8TCU6 1659 aa12.57□□□□□ -0.4
CHRNB1-205ENST00000573209 CCDC196A0A1B0GTZ2 297 aa12.57□□□□□ -0.4
CHRNB1-205ENST00000573209 H0YHG0 523 aa12.57□□□□□ -0.4
CHRNB1-205ENST00000573209 SARNPP82979 210 aaKnown RBP12.57□□□□□ -0.4
CHRNB1-205ENST00000573209 NCBP1Q09161 790 aaKnown RBP12.57□□□□□ -0.4
CHRNB1-205ENST00000573209 TTC31Q49AM3 519 aaPredicted RBP12.57□□□□□ -0.4
CHRNB1-205ENST00000573209 RIOK3O14730 519 aaKnown RBP12.57□□□□□ -0.4
CHRNB1-205ENST00000573209 RAB3GAP1Q15042 981 aa12.57□□□□□ -0.4
CHRNB1-205ENST00000573209 SUGP1Q8IWZ8 645 aaKnown RBP12.57□□□□□ -0.4
CHRNB1-205ENST00000573209 RBSNQ9H1K0 784 aa12.57□□□□□ -0.4
CHRNB1-205ENST00000573209 SENP3Q9H4L4 574 aaPredicted RBP12.57□□□□□ -0.4
CHRNB1-205ENST00000573209 RICTORQ6R327 1708 aa12.57□□□□□ -0.4
CHRNB1-205ENST00000573209 IL16Q14005 1332 aa12.56□□□□□ -0.4
CHRNB1-205ENST00000573209 IPO8O15397 1037 aaKnown RBP12.56□□□□□ -0.4
CHRNB1-205ENST00000573209 PPP2R5AQ15172 486 aa12.56□□□□□ -0.4
CHRNB1-205ENST00000573209 TSGA10IPQ3SY00 556 aa12.56□□□□□ -0.4
CHRNB1-205ENST00000573209 HSCBQ8IWL3 235 aa12.56□□□□□ -0.4
CHRNB1-205ENST00000573209 YEATS2Q9ULM3 1422 aa12.56□□□□□ -0.4
CHRNB1-205ENST00000573209 NRDCO43847 1150 aa12.56□□□□□ -0.4
CHRNB1-205ENST00000573209 TSHZ1Q6ZSZ6 1077 aa12.56□□□□□ -0.4
CHRNB1-205ENST00000573209 TMEM131LA2VDJ0 1609 aa12.55□□□□□ -0.4
CHRNB1-205ENST00000573209 IPO7O95373 1038 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms