RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 UPF1Q92900 1129 aaKnown RBP eCLIP30.55■■■□□ 2.48
TVP23A-206ENST00000572980 APBA3O96018 575 aa30.54■■■□□ 2.48
TVP23A-206ENST00000572980 THUMPD2Q9BTF0 503 aaKnown RBP30.54■■■□□ 2.48
TVP23A-206ENST00000572980 SALL2Q9Y467 1007 aaPredicted RBP30.53■■■□□ 2.48
TVP23A-206ENST00000572980 BTAF1O14981 1849 aa30.52■■■□□ 2.48
TVP23A-206ENST00000572980 TAF7Q15545 349 aaPredicted RBP30.51■■■□□ 2.47
TVP23A-206ENST00000572980 TNS1Q9HBL0 1735 aaKnown RBP30.51■■■□□ 2.47
TVP23A-206ENST00000572980 CALD1Q05682 793 aaKnown RBP30.5■■■□□ 2.47
TVP23A-206ENST00000572980 WWC1Q8IX03 1113 aa30.49■■■□□ 2.47
TVP23A-206ENST00000572980 SMARCC1Q92922 1105 aaPredicted RBP30.49■■■□□ 2.47
TVP23A-206ENST00000572980 BAG6P46379 1132 aa30.49■■■□□ 2.47
TVP23A-206ENST00000572980 BTBD11A6QL63 1104 aa30.48■■■□□ 2.47
TVP23A-206ENST00000572980 PLSCR1O15162 318 aa30.48■■■□□ 2.47
TVP23A-206ENST00000572980 ATG3Q9NT62 314 aa30.47■■■□□ 2.47
TVP23A-206ENST00000572980 ASAP1Q9ULH1 1129 aa30.47■■■□□ 2.47
TVP23A-206ENST00000572980 SIPA1L3O60292 1781 aaPredicted RBP30.46■■■□□ 2.47
TVP23A-206ENST00000572980 PALLDQ8WX93 1383 aa30.43■■■□□ 2.46
TVP23A-206ENST00000572980 TTC5Q8N0Z6 440 aa30.43■■■□□ 2.46
TVP23A-206ENST00000572980 BABAM1Q9NWV8 329 aa30.43■■■□□ 2.46
TVP23A-206ENST00000572980 SLC39A6Q13433 755 aa30.42■■■□□ 2.46
TVP23A-206ENST00000572980 ZNF790Q6PG37 636 aa30.42■■■□□ 2.46
TVP23A-206ENST00000572980 HNRNPUQ00839 825 aaKnown RBP eCLIP30.41■■■□□ 2.46
TVP23A-206ENST00000572980 EN1Q05925 392 aaPredicted RBP30.41■■■□□ 2.46
TVP23A-206ENST00000572980 WDR63Q8IWG1 891 aa30.41■■■□□ 2.46
TVP23A-206ENST00000572980 DEFB132Q7Z7B7 95 aa30.41■■■□□ 2.46
TVP23A-206ENST00000572980 MIS18AQ9NYP9 233 aa30.41■■■□□ 2.46
TVP23A-206ENST00000572980 LAS1LQ9Y4W2 734 aaKnown RBP30.41■■■□□ 2.46
TVP23A-206ENST00000572980 CFAP44Q96MT7 982 aa30.4■■■□□ 2.46
TVP23A-206ENST00000572980 SOCS7O14512 581 aa30.39■■■□□ 2.46
TVP23A-206ENST00000572980 IFT57Q9NWB7 429 aa30.39■■■□□ 2.46
TVP23A-206ENST00000572980 TSPYL4Q9UJ04 414 aa30.39■■■□□ 2.46
TVP23A-206ENST00000572980 GNAI1P63096 354 aa30.38■■■□□ 2.45
TVP23A-206ENST00000572980 CAMKK2Q96RR4 588 aa30.38■■■□□ 2.45
TVP23A-206ENST00000572980 IL16Q14005 1332 aa30.38■■■□□ 2.45
TVP23A-206ENST00000572980 RGPD3A6NKT7 1758 aaPredicted RBP30.38■■■□□ 2.45
TVP23A-206ENST00000572980 RGPD4Q7Z3J3 1758 aa30.38■■■□□ 2.45
TVP23A-206ENST00000572980 PAPPAQ13219 1627 aa30.37■■■□□ 2.45
TVP23A-206ENST00000572980 CHL1O00533 1208 aa30.37■■■□□ 2.45
TVP23A-206ENST00000572980 PTCD1O75127 700 aaKnown RBP30.37■■■□□ 2.45
TVP23A-206ENST00000572980 RBM42Q9BTD8 480 aaKnown RBP30.37■■■□□ 2.45
TVP23A-206ENST00000572980 TXNRD1Q16881 649 aa30.37■■■□□ 2.45
TVP23A-206ENST00000572980 LOC102724428A0A0B4J2F2 783 aa30.36■■■□□ 2.45
TVP23A-206ENST00000572980 SIK1P57059 783 aa30.36■■■□□ 2.45
TVP23A-206ENST00000572980 EZH2Q15910 746 aaKnown RBP30.36■■■□□ 2.45
TVP23A-206ENST00000572980 SLC27A3Q5K4L6 730 aa30.36■■■□□ 2.45
TVP23A-206ENST00000572980 ZNF521Q96K83 1311 aa30.36■■■□□ 2.45
TVP23A-206ENST00000572980 LY75O60449 1722 aa30.35■■■□□ 2.45
TVP23A-206ENST00000572980 KCNQ3O43525 872 aa30.34■■■□□ 2.45
TVP23A-206ENST00000572980 ZNF853P0CG23 659 aa30.34■■■□□ 2.45
TVP23A-206ENST00000572980 CCNL1Q9UK58 526 aaPredicted RBP30.34■■■□□ 2.45
TVP23A-206ENST00000572980 PROM2Q8N271 834 aa30.33■■■□□ 2.45
TVP23A-206ENST00000572980 FMNL2Q96PY5 1086 aa30.33■■■□□ 2.45
TVP23A-206ENST00000572980 HMGB2P26583 209 aaKnown RBP30.32■■■□□ 2.45
TVP23A-206ENST00000572980 ZNF496Q96IT1 587 aaPredicted RBP30.32■■■□□ 2.45
TVP23A-206ENST00000572980 KDM3BQ7LBC6 1761 aa30.32■■■□□ 2.44
TVP23A-206ENST00000572980 ATP6V1AP38606 617 aa30.32■■■□□ 2.44
TVP23A-206ENST00000572980 GOLGA2Q08379 1002 aa30.31■■■□□ 2.44
TVP23A-206ENST00000572980 KCPQ6ZWJ8 1503 aa30.31■■■□□ 2.44
TVP23A-206ENST00000572980 UBR2Q8IWV8 1755 aa30.31■■■□□ 2.44
TVP23A-206ENST00000572980 VSIG10Q8N0Z9 540 aa30.3■■■□□ 2.44
TVP23A-206ENST00000572980 MBIPQ9NS73 344 aa30.3■■■□□ 2.44
TVP23A-206ENST00000572980 EIF4A1P60842 406 aaKnown RBP30.28■■■□□ 2.44
TVP23A-206ENST00000572980 SLC4A9Q96Q91 983 aa30.28■■■□□ 2.44
TVP23A-206ENST00000572980 LRRC4BQ9NT99 713 aa30.28■■■□□ 2.44
TVP23A-206ENST00000572980 HEG1Q9ULI3 1381 aa30.27■■■□□ 2.44
TVP23A-206ENST00000572980 KCNQ4P56696 695 aa30.27■■■□□ 2.44
TVP23A-206ENST00000572980 MYH16Q9H6N6 1097 aa30.27■■■□□ 2.44
TVP23A-206ENST00000572980 ZNF831Q5JPB2 1677 aa30.26■■■□□ 2.43
TVP23A-206ENST00000572980 TEX13AQ9BXU3 409 aaPredicted RBP30.25■■■□□ 2.43
TVP23A-206ENST00000572980 ZBED9Q6R2W3 1325 aa30.25■■■□□ 2.43
TVP23A-206ENST00000572980 E9PSI1 815 aa30.24■■■□□ 2.43
TVP23A-206ENST00000572980 SNRPA1P09661 255 aaKnown RBP30.24■■■□□ 2.43
TVP23A-206ENST00000572980 ITPK1Q13572 414 aa30.24■■■□□ 2.43
TVP23A-206ENST00000572980 TSR2Q969E8 191 aaKnown RBP30.24■■■□□ 2.43
TVP23A-206ENST00000572980 SPINK5Q9NQ38 1064 aaPredicted RBP30.24■■■□□ 2.43
TVP23A-206ENST00000572980 RREB1Q92766 1687 aa30.23■■■□□ 2.43
TVP23A-206ENST00000572980 GIGYF1O75420 1035 aaPredicted RBP30.21■■■□□ 2.43
TVP23A-206ENST00000572980 DNAJC10Q8IXB1 793 aa30.21■■■□□ 2.43
TVP23A-206ENST00000572980 FANCIQ9NVI1 1328 aa30.21■■■□□ 2.43
TVP23A-206ENST00000572980 SLFN5Q08AF3 891 aa30.2■■■□□ 2.43
TVP23A-206ENST00000572980 STARD3NLO95772 234 aa30.2■■■□□ 2.42
TVP23A-206ENST00000572980 CICQ96RK0 1608 aaPredicted RBP30.19■■■□□ 2.42
TVP23A-206ENST00000572980 C5P01031 1676 aa30.18■■■□□ 2.42
TVP23A-206ENST00000572980 LINC00116Q8NCU8 138 aa30.18■■■□□ 2.42
TVP23A-206ENST00000572980 CDCA7LQ96GN5 454 aa30.18■■■□□ 2.42
TVP23A-206ENST00000572980 TAF1LQ8IZX4 1826 aa30.18■■■□□ 2.42
TVP23A-206ENST00000572980 TJP1Q07157 1748 aa30.17■■■□□ 2.42
TVP23A-206ENST00000572980 NBPF14Q5TI25 921 aa30.17■■■□□ 2.42
TVP23A-206ENST00000572980 NUP188Q5SRE5 1749 aa30.17■■■□□ 2.42
TVP23A-206ENST00000572980 CYP19A1P11511 503 aaPredicted RBP30.16■■■□□ 2.42
TVP23A-206ENST00000572980 YTHDC1Q96MU7 727 aaKnown RBP30.16■■■□□ 2.42
TVP23A-206ENST00000572980 PRAMEF22A3QJZ6 481 aa30.15■■■□□ 2.42
TVP23A-206ENST00000572980 KRT24Q2M2I5 525 aa30.15■■■□□ 2.42
TVP23A-206ENST00000572980 USP16Q9Y5T5 823 aa30.15■■■□□ 2.42
TVP23A-206ENST00000572980 HOXB7P09629 217 aa30.15■■■□□ 2.42
TVP23A-206ENST00000572980 RC3H1Q5TC82 1133 aaKnown RBP30.15■■■□□ 2.42
TVP23A-206ENST00000572980 COL5A3P25940 1745 aaPredicted RBP30.14■■■□□ 2.42
TVP23A-206ENST00000572980 DUSP27Q5VZP5 1158 aa30.14■■■□□ 2.42
TVP23A-206ENST00000572980 CNTNAP4Q9C0A0 1308 aa30.13■■■□□ 2.41
TVP23A-206ENST00000572980 CRKLP46109 303 aaKnown RBP30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms