RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 GNAI3P08754 354 aa20.25■□□□□ 0.83
POLR2A-201ENST00000572844 TTC22Q5TAA0 569 aa20.25■□□□□ 0.83
POLR2A-201ENST00000572844 TBC1D9Q6ZT07 1266 aa20.25■□□□□ 0.83
POLR2A-201ENST00000572844 SNX21Q969T3 373 aa20.25■□□□□ 0.83
POLR2A-201ENST00000572844 DCCP43146 1447 aa20.25■□□□□ 0.83
POLR2A-201ENST00000572844 GNAI2P04899 355 aa20.25■□□□□ 0.83
POLR2A-201ENST00000572844 SLC4A10Q6U841 1118 aa20.25■□□□□ 0.83
POLR2A-201ENST00000572844 KRT28Q7Z3Y7 464 aa20.24■□□□□ 0.83
POLR2A-201ENST00000572844 ADAMTS7Q9UKP4 1686 aa20.24■□□□□ 0.83
POLR2A-201ENST00000572844 FKBP5Q13451 457 aaPredicted RBP20.23■□□□□ 0.83
POLR2A-201ENST00000572844 SIPA1L3O60292 1781 aaPredicted RBP20.23■□□□□ 0.83
POLR2A-201ENST00000572844 RGPD5Q99666 1765 aa20.23■□□□□ 0.83
POLR2A-201ENST00000572844 GSPT1P15170 499 aaKnown RBP20.23■□□□□ 0.83
POLR2A-201ENST00000572844 EIF4A1P60842 406 aaKnown RBP20.22■□□□□ 0.83
POLR2A-201ENST00000572844 HDGFL1Q5TGJ6 251 aa20.22■□□□□ 0.83
POLR2A-201ENST00000572844 STRCP1A6NGW2 1772 aa20.21■□□□□ 0.83
POLR2A-201ENST00000572844 FRAT2O75474 233 aaPredicted RBP20.2■□□□□ 0.82
POLR2A-201ENST00000572844 ZNF530Q6P9A1 599 aaPredicted RBP20.2■□□□□ 0.82
POLR2A-201ENST00000572844 HSCBQ8IWL3 235 aa20.2■□□□□ 0.82
POLR2A-201ENST00000572844 ANKRD24Q8TF21 1146 aa20.2■□□□□ 0.82
POLR2A-201ENST00000572844 OSBPL3Q9H4L5 887 aa20.2■□□□□ 0.82
POLR2A-201ENST00000572844 LRRC59Q96AG4 307 aaKnown RBP20.2■□□□□ 0.82
POLR2A-201ENST00000572844 LGR6Q9HBX8 967 aa20.2■□□□□ 0.82
POLR2A-201ENST00000572844 ABCC6O95255 1503 aa20.19■□□□□ 0.82
POLR2A-201ENST00000572844 TUBGCP6Q96RT7 1819 aa20.19■□□□□ 0.82
POLR2A-201ENST00000572844 ATP8B2P98198 1209 aa20.19■□□□□ 0.82
POLR2A-201ENST00000572844 SLKQ9H2G2 1235 aaPredicted RBP20.19■□□□□ 0.82
POLR2A-201ENST00000572844 C16orf71Q8IYS4 520 aaPredicted RBP20.18■□□□□ 0.82
POLR2A-201ENST00000572844 CRYBG1Q9Y4K1 1723 aa20.18■□□□□ 0.82
POLR2A-201ENST00000572844 XPCQ01831 940 aaPredicted RBP20.18■□□□□ 0.82
POLR2A-201ENST00000572844 TEFQ10587 303 aa20.18■□□□□ 0.82
POLR2A-201ENST00000572844 PXDNQ92626 1479 aa20.17■□□□□ 0.82
POLR2A-201ENST00000572844 ZBTB7CA1YPR0 619 aa20.17■□□□□ 0.82
POLR2A-201ENST00000572844 RNMTO43148 476 aaKnown RBP20.17■□□□□ 0.82
POLR2A-201ENST00000572844 KIF2CQ99661 725 aa20.17■□□□□ 0.82
POLR2A-201ENST00000572844 PLEKHG2Q9H7P9 1386 aa20.17■□□□□ 0.82
POLR2A-201ENST00000572844 C1orf141Q5JVX7 400 aa20.17■□□□□ 0.82
POLR2A-201ENST00000572844 COL18A1P39060 1754 aa20.17■□□□□ 0.82
POLR2A-201ENST00000572844 GSE1Q14687 1217 aa20.15■□□□□ 0.82
POLR2A-201ENST00000572844 NECTIN2Q92692 538 aa20.15■□□□□ 0.82
POLR2A-201ENST00000572844 HEG1Q9ULI3 1381 aa20.15■□□□□ 0.82
POLR2A-201ENST00000572844 BTBD11A6QL63 1104 aa20.15■□□□□ 0.82
POLR2A-201ENST00000572844 USP44Q9H0E7 712 aa20.15■□□□□ 0.82
POLR2A-201ENST00000572844 CHMP5Q9NZZ3 219 aa20.15■□□□□ 0.82
POLR2A-201ENST00000572844 SMARCA5O60264 1052 aaPredicted RBP20.14■□□□□ 0.81
POLR2A-201ENST00000572844 ATF3P18847 181 aa20.14■□□□□ 0.81
POLR2A-201ENST00000572844 OTUD7AQ8TE49 926 aaPredicted RBP20.14■□□□□ 0.81
POLR2A-201ENST00000572844 SCN11AQ9UI33 1791 aa20.14■□□□□ 0.81
POLR2A-201ENST00000572844 LMOD2Q6P5Q4 547 aa20.14■□□□□ 0.81
POLR2A-201ENST00000572844 AXIN2Q9Y2T1 843 aa20.14■□□□□ 0.81
POLR2A-201ENST00000572844 TMEM94Q12767 1356 aa20.14■□□□□ 0.81
POLR2A-201ENST00000572844 IBTKQ9P2D0 1353 aaPredicted RBP20.14■□□□□ 0.81
POLR2A-201ENST00000572844 ERBB3P21860 1342 aa20.13■□□□□ 0.81
POLR2A-201ENST00000572844 SDSP20132 328 aa20.13■□□□□ 0.81
POLR2A-201ENST00000572844 CASC1Q6TDU7 716 aa20.13■□□□□ 0.81
POLR2A-201ENST00000572844 PHAXQ9H814 394 aaKnown RBP20.13■□□□□ 0.81
POLR2A-201ENST00000572844 SALL3Q9BXA9 1300 aa20.13■□□□□ 0.81
POLR2A-201ENST00000572844 MPRIPQ6WCQ1 1025 aa20.12■□□□□ 0.81
POLR2A-201ENST00000572844 UBTFL1P0CB47 393 aaPredicted RBP20.12■□□□□ 0.81
POLR2A-201ENST00000572844 LRRCC1Q9C099 1032 aa20.12■□□□□ 0.81
POLR2A-201ENST00000572844 SRCIN1Q9C0H9 1055 aa20.12■□□□□ 0.81
POLR2A-201ENST00000572844 KDM4FA0A1W2PPD8 638 aa20.11■□□□□ 0.81
POLR2A-201ENST00000572844 PDE1AP54750 535 aa20.11■□□□□ 0.81
POLR2A-201ENST00000572844 LRRFIP2Q9Y608 721 aaKnown RBP20.11■□□□□ 0.81
POLR2A-201ENST00000572844 PNMA6EA0A0J9YXQ4 647 aa20.11■□□□□ 0.81
POLR2A-201ENST00000572844 DDIT3P35638 169 aa20.11■□□□□ 0.81
POLR2A-201ENST00000572844 SSH3Q8TE77 659 aa20.11■□□□□ 0.81
POLR2A-201ENST00000572844 KCNQ3O43525 872 aa20.1■□□□□ 0.81
POLR2A-201ENST00000572844 CHPF2Q9P2E5 772 aa20.1■□□□□ 0.81
POLR2A-201ENST00000572844 EIF2S2P20042 333 aaKnown RBP20.09■□□□□ 0.81
POLR2A-201ENST00000572844 DNAAF4Q8WXU2 420 aa20.09■□□□□ 0.81
POLR2A-201ENST00000572844 USP26Q9BXU7 913 aa20.09■□□□□ 0.81
POLR2A-201ENST00000572844 DBF4Q9UBU7 674 aaPredicted RBP20.09■□□□□ 0.81
POLR2A-201ENST00000572844 CIZ1Q9ULV3 898 aaPredicted RBP20.09■□□□□ 0.81
POLR2A-201ENST00000572844 APBB1O00213 710 aa20.09■□□□□ 0.81
POLR2A-201ENST00000572844 BEND3Q5T5X7 828 aa20.09■□□□□ 0.81
POLR2A-201ENST00000572844 CADPS2Q86UW7 1296 aa20.09■□□□□ 0.81
POLR2A-201ENST00000572844 EXOC6BQ9Y2D4 811 aa20.09■□□□□ 0.81
POLR2A-201ENST00000572844 AOX1Q06278 1338 aa20.09■□□□□ 0.81
POLR2A-201ENST00000572844 POLA2Q14181 598 aa20.08■□□□□ 0.81
POLR2A-201ENST00000572844 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.08■□□□□ 0.818e-7■■■□□ 14.6
POLR2A-201ENST00000572844 STAP2Q9UGK3 403 aa20.08■□□□□ 0.81
POLR2A-201ENST00000572844 NPHP3Q7Z494 1330 aa20.08■□□□□ 0.8
POLR2A-201ENST00000572844 TNS3Q68CZ2 1445 aa20.08■□□□□ 0.8
POLR2A-201ENST00000572844 RAB11FIP3O75154 756 aa20.07■□□□□ 0.8
POLR2A-201ENST00000572844 GIGYF1O75420 1035 aaPredicted RBP20.07■□□□□ 0.8
POLR2A-201ENST00000572844 RABEP1Q15276 862 aa20.07■□□□□ 0.8
POLR2A-201ENST00000572844 XIRP1Q702N8 1843 aaKnown RBP20.07■□□□□ 0.8
POLR2A-201ENST00000572844 REC8O95072 547 aa20.06■□□□□ 0.8
POLR2A-201ENST00000572844 ADCY9O60503 1353 aa20.06■□□□□ 0.8
POLR2A-201ENST00000572844 PKD1L3Q7Z443 1732 aa20.06■□□□□ 0.8
POLR2A-201ENST00000572844 K7ELQ4 463 aaPredicted RBP20.06■□□□□ 0.8
POLR2A-201ENST00000572844 PI4KAP2A4QPH2 592 aa20.05■□□□□ 0.8
POLR2A-201ENST00000572844 MX1P20591 662 aa20.05■□□□□ 0.8
POLR2A-201ENST00000572844 PI4KAP1Q8N8J0 262 aa20.05■□□□□ 0.8
POLR2A-201ENST00000572844 ALDH1L1O75891 902 aa20.04■□□□□ 0.8
POLR2A-201ENST00000572844 HSP90AB1P08238 724 aaKnown RBP20.04■□□□□ 0.8
POLR2A-201ENST00000572844 HSPA2P54652 639 aa20.04■□□□□ 0.8
POLR2A-201ENST00000572844 ZC3H6P61129 1189 aaKnown RBP20.04■□□□□ 0.8
POLR2A-201ENST00000572844 SPRYD3Q8NCJ5 442 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms