RNA–Protein interactions for RNA: ENST00000571945.5

ABR-215, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-215	ENST00000571945	ATG3	Q9NT62	314 aa		33.69	■■■□□ 2.98
ABR-215	ENST00000571945	ASAP1	Q9ULH1	1129 aa		33.69	■■■□□ 2.98
ABR-215	ENST00000571945	C4B	P0C0L5	1744 aa		33.68	■■■□□ 2.98
ABR-215	ENST00000571945	GNAT3	A8MTJ3	354 aa		33.68	■■■□□ 2.98
ABR-215	ENST00000571945	AKT1S1	Q96B36	256 aa		33.68	■■■□□ 2.98
ABR-215	ENST00000571945	SLC52A2	Q9HAB3	445 aa		33.68	■■■□□ 2.98
ABR-215	ENST00000571945	ZNF827	Q17R98	1081 aa		33.67	■■■□□ 2.98
ABR-215	ENST00000571945	DLG5	Q8TDM6	1919 aa		33.67	■■■□□ 2.98
ABR-215	ENST00000571945	PNN	Q9H307	717 aa	Known RBP	33.66	■■■□□ 2.98
ABR-215	ENST00000571945	LGR6	Q9HBX8	967 aa		33.66	■■■□□ 2.98
ABR-215	ENST00000571945	LOC102724428	A0A0B4J2F2	783 aa		33.65	■■■□□ 2.98
ABR-215	ENST00000571945	NEFM	P07197	916 aa		33.65	■■■□□ 2.98
ABR-215	ENST00000571945	KCNQ4	P56696	695 aa		33.65	■■■□□ 2.98
ABR-215	ENST00000571945	SIK1	P57059	783 aa		33.65	■■■□□ 2.98
ABR-215	ENST00000571945	NFATC2IP	Q8NCF5	419 aa		33.65	■■■□□ 2.98
ABR-215	ENST00000571945	COL5A3	P25940	1745 aa	Predicted RBP	33.65	■■■□□ 2.98
ABR-215	ENST00000571945	CEMIP	Q8WUJ3	1361 aa		33.63	■■■□□ 2.97
ABR-215	ENST00000571945	UBR2	Q8IWV8	1755 aa		33.62	■■■□□ 2.97
ABR-215	ENST00000571945	PLEKHF1	Q96S99	279 aa		33.62	■■■□□ 2.97
ABR-215	ENST00000571945	UBR3	Q6ZT12	1888 aa		33.6	■■■□□ 2.97
ABR-215	ENST00000571945	MAPK8IP3	Q9UPT6	1336 aa		33.58	■■■□□ 2.97
ABR-215	ENST00000571945	TJP1	Q07157	1748 aa		33.58	■■■□□ 2.97
ABR-215	ENST00000571945	IL17RE	Q8NFR9	667 aa		33.57	■■■□□ 2.96
ABR-215	ENST00000571945	SRCAP	Q6ZRS2	3230 aa		33.56	■■■□□ 2.96
ABR-215	ENST00000571945	HTATSF1	O43719	755 aa	Known RBP	33.56	■■■□□ 2.96
ABR-215	ENST00000571945	WDR43	Q15061	677 aa	Known RBP eCLIP	33.56	■■■□□ 2.96
ABR-215	ENST00000571945	TFCP2L1	Q9NZI6	479 aa		33.56	■■■□□ 2.96
ABR-215	ENST00000571945	KCP	Q6ZWJ8	1503 aa		33.56	■■■□□ 2.96
ABR-215	ENST00000571945	ATP6V1A	P38606	617 aa		33.55	■■■□□ 2.96
ABR-215	ENST00000571945	TEF	Q10587	303 aa		33.55	■■■□□ 2.96
ABR-215	ENST00000571945	ANP32C	O43423	234 aa		33.54	■■■□□ 2.96
ABR-215	ENST00000571945	RTF1	Q92541	710 aa	Known RBP	33.54	■■■□□ 2.96
ABR-215	ENST00000571945	PNPLA7	Q6ZV29	1317 aa		33.53	■■■□□ 2.96
ABR-215	ENST00000571945	ITPK1	Q13572	414 aa		33.53	■■■□□ 2.96
ABR-215	ENST00000571945	RBM42	Q9BTD8	480 aa	Known RBP	33.53	■■■□□ 2.96
ABR-215	ENST00000571945	LINC00116	Q8NCU8	138 aa		33.52	■■■□□ 2.96
ABR-215	ENST00000571945	PDGFD	Q9GZP0	370 aa	Predicted RBP	33.52	■■■□□ 2.96
ABR-215	ENST00000571945	COL24A1	Q17RW2	1714 aa		33.52	■■■□□ 2.96
ABR-215	ENST00000571945	NFE2L2	Q16236	605 aa		33.51	■■■□□ 2.95
ABR-215	ENST00000571945	AK7	Q96M32	723 aa		33.51	■■■□□ 2.95
ABR-215	ENST00000571945	SLC4A9	Q96Q91	983 aa		33.51	■■■□□ 2.95
ABR-215	ENST00000571945	SPON1	Q9HCB6	807 aa		33.5	■■■□□ 2.95
ABR-215	ENST00000571945	PTCD1	O75127	700 aa	Known RBP	33.48	■■■□□ 2.95
ABR-215	ENST00000571945	MTFR1L	Q9H019	292 aa		33.48	■■■□□ 2.95
ABR-215	ENST00000571945	FLAD1	Q8NFF5	587 aa		33.47	■■■□□ 2.95
ABR-215	ENST00000571945	SLC16A10	Q8TF71	515 aa		33.47	■■■□□ 2.95
ABR-215	ENST00000571945	SLC39A6	Q13433	755 aa		33.46	■■■□□ 2.95
ABR-215	ENST00000571945	MYH14	Q7Z406	1995 aa	Known RBP	33.46	■■■□□ 2.95
ABR-215	ENST00000571945	CNTNAP4	Q9C0A0	1308 aa		33.46	■■■□□ 2.95
ABR-215	ENST00000571945	MCM10	Q7L590	875 aa		33.45	■■■□□ 2.95
ABR-215	ENST00000571945	TTC5	Q8N0Z6	440 aa		33.45	■■■□□ 2.95
ABR-215	ENST00000571945	ZBTB7A	O95365	584 aa		33.44	■■■□□ 2.94
ABR-215	ENST00000571945	VSIG10	Q8N0Z9	540 aa		33.43	■■■□□ 2.94
ABR-215	ENST00000571945	ADAMTS8	Q9UP79	889 aa		33.43	■■■□□ 2.94
ABR-215	ENST00000571945	SSFA2	P28290	1259 aa		33.42	■■■□□ 2.94
ABR-215	ENST00000571945	RC3H1	Q5TC82	1133 aa	Known RBP	33.42	■■■□□ 2.94
ABR-215	ENST00000571945	ZNF790	Q6PG37	636 aa		33.42	■■■□□ 2.94
ABR-215	ENST00000571945	RUNDC1	Q96C34	613 aa		33.42	■■■□□ 2.94
ABR-215	ENST00000571945	KDM3B	Q7LBC6	1761 aa		33.42	■■■□□ 2.94
ABR-215	ENST00000571945	DCTN1	Q14203	1278 aa		33.4	■■■□□ 2.94
ABR-215	ENST00000571945	COL23A1	Q86Y22	540 aa	Predicted RBP	33.4	■■■□□ 2.94
ABR-215	ENST00000571945	BTBD11	A6QL63	1104 aa		33.39	■■■□□ 2.94
ABR-215	ENST00000571945	GNPAT	O15228	680 aa		33.39	■■■□□ 2.94
ABR-215	ENST00000571945	LMOD3	Q0VAK6	560 aa		33.38	■■■□□ 2.93
ABR-215	ENST00000571945	CCDC146	Q8IYE0	955 aa		33.38	■■■□□ 2.93
ABR-215	ENST00000571945	C4A	P0C0L4	1744 aa		33.38	■■■□□ 2.93
ABR-215	ENST00000571945	TMPO	P42166	694 aa	Known RBP	33.37	■■■□□ 2.93
ABR-215	ENST00000571945	HEG1	Q9ULI3	1381 aa		33.36	■■■□□ 2.93
ABR-215	ENST00000571945	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.36	■■■□□ 2.93
ABR-215	ENST00000571945	PTGER2	P43116	358 aa		33.36	■■■□□ 2.93
ABR-215	ENST00000571945	AMIGO3	Q86WK7	504 aa		33.36	■■■□□ 2.93
ABR-215	ENST00000571945	RIPK4	P57078	832 aa		33.35	■■■□□ 2.93
ABR-215	ENST00000571945	CCDC184	Q52MB2	194 aa		33.35	■■■□□ 2.93
ABR-215	ENST00000571945	DNAJC10	Q8IXB1	793 aa		33.35	■■■□□ 2.93
ABR-215	ENST00000571945	SGIP1	Q9BQI5	828 aa		33.35	■■■□□ 2.93
ABR-215	ENST00000571945	ATF5	Q9Y2D1	282 aa	Predicted RBP	33.35	■■■□□ 2.93
ABR-215	ENST00000571945	ADRA2B	P18089	450 aa		33.34	■■■□□ 2.93
ABR-215	ENST00000571945	CRKL	P46109	303 aa	Known RBP	33.34	■■■□□ 2.93
ABR-215	ENST00000571945	ZNF496	Q96IT1	587 aa	Predicted RBP	33.34	■■■□□ 2.93
ABR-215	ENST00000571945	FMNL2	Q96PY5	1086 aa		33.34	■■■□□ 2.93
ABR-215	ENST00000571945	RTCB	Q9Y3I0	505 aa	Known RBP	33.34	■■■□□ 2.93
ABR-215	ENST00000571945	MSH5	O43196	834 aa		33.33	■■■□□ 2.93
ABR-215	ENST00000571945	PHF14	O94880	888 aa		33.33	■■■□□ 2.93
ABR-215	ENST00000571945	TAF7	Q15545	349 aa	Predicted RBP	33.33	■■■□□ 2.93
ABR-215	ENST00000571945	RPS6KA4	O75676	772 aa		33.32	■■■□□ 2.92
ABR-215	ENST00000571945	PNISR	Q8TF01	805 aa	Known RBP	33.32	■■■□□ 2.92
ABR-215	ENST00000571945	MRS2	Q9HD23	443 aa		33.32	■■■□□ 2.92
ABR-215	ENST00000571945	LAMB4	A4D0S4	1761 aa		33.31	■■■□□ 2.92
ABR-215	ENST00000571945	CYP19A1	P11511	503 aa	Predicted RBP	33.3	■■■□□ 2.92
ABR-215	ENST00000571945	PPP1R1B	Q9UD71	204 aa	Predicted RBP	33.3	■■■□□ 2.92
ABR-215	ENST00000571945	TEX13A	Q9BXU3	409 aa	Predicted RBP	33.29	■■■□□ 2.92
ABR-215	ENST00000571945	CCDC87	Q9NVE4	849 aa		33.29	■■■□□ 2.92
ABR-215	ENST00000571945	THUMPD2	Q9BTF0	503 aa	Known RBP	33.28	■■■□□ 2.92
ABR-215	ENST00000571945	KCNQ3	O43525	872 aa		33.27	■■■□□ 2.92
ABR-215	ENST00000571945	POLD1	P28340	1107 aa		33.27	■■■□□ 2.92
ABR-215	ENST00000571945	INTS5	Q6P9B9	1019 aa	Known RBP	33.27	■■■□□ 2.92
ABR-215	ENST00000571945	TRAPPC3L	Q5T215	181 aa		33.26	■■■□□ 2.91
ABR-215	ENST00000571945	RRP7A	Q9Y3A4	280 aa	Known RBP	33.26	■■■□□ 2.91
ABR-215	ENST00000571945	STARD3NL	O95772	234 aa		33.25	■■■□□ 2.91
ABR-215	ENST00000571945	SMIM5	Q71RC9	77 aa		33.24	■■■□□ 2.91

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