RNA–Protein interactions for RNA: ENST00000571543.1

ABR-213, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-213ENST00000571543 SIK1P57059 783 aa28.23■■■□□ 2.11
ABR-213ENST00000571543 HMGB2P26583 209 aaKnown RBP28.21■■■□□ 2.11
ABR-213ENST00000571543 CABP4P57796 275 aa28.21■■■□□ 2.11
ABR-213ENST00000571543 POLD1P28340 1107 aa28.2■■■□□ 2.1
ABR-213ENST00000571543 COL23A1Q86Y22 540 aaPredicted RBP28.2■■■□□ 2.1
ABR-213ENST00000571543 U2SURPO15042 1029 aaKnown RBP28.19■■■□□ 2.1
ABR-213ENST00000571543 MSH5O43196 834 aa28.19■■■□□ 2.1
ABR-213ENST00000571543 AKAP4Q5JQC9 854 aa28.18■■■□□ 2.1
ABR-213ENST00000571543 PPP2R1AP30153 589 aa28.17■■■□□ 2.1
ABR-213ENST00000571543 ATP6V1AP38606 617 aa28.17■■■□□ 2.1
ABR-213ENST00000571543 KLHL34Q8N239 644 aa28.17■■■□□ 2.1
ABR-213ENST00000571543 LINC00116Q8NCU8 138 aa28.17■■■□□ 2.1
ABR-213ENST00000571543 ITPK1Q13572 414 aa28.16■■■□□ 2.1
ABR-213ENST00000571543 NFATC2IPQ8NCF5 419 aa28.16■■■□□ 2.1
ABR-213ENST00000571543 AK7Q96M32 723 aa28.16■■■□□ 2.1
ABR-213ENST00000571543 CFAP53Q96M91 514 aa28.16■■■□□ 2.1
ABR-213ENST00000571543 MTHFSDQ2M296 383 aaKnown RBP28.15■■■□□ 2.1
ABR-213ENST00000571543 RBM42Q9BTD8 480 aaKnown RBP28.14■■■□□ 2.1
ABR-213ENST00000571543 AMIGO3Q86WK7 504 aa28.13■■■□□ 2.09
ABR-213ENST00000571543 LGR6Q9HBX8 967 aa28.13■■■□□ 2.09
ABR-213ENST00000571543 SMIM5Q71RC9 77 aa28.12■■■□□ 2.09
ABR-213ENST00000571543 FLAD1Q8NFF5 587 aa28.12■■■□□ 2.09
ABR-213ENST00000571543 SLC4A9Q96Q91 983 aa28.12■■■□□ 2.09
ABR-213ENST00000571543 SCN11AQ9UI33 1791 aa28.11■■■□□ 2.09
ABR-213ENST00000571543 MSL1Q68DK7 614 aa28.11■■■□□ 2.09
ABR-213ENST00000571543 PHF14O94880 888 aa28.1■■■□□ 2.09
ABR-213ENST00000571543 NLGN2Q8NFZ4 835 aa28.1■■■□□ 2.09
ABR-213ENST00000571543 VIRMAQ69YN4 1812 aaKnown RBP28.09■■■□□ 2.09
ABR-213ENST00000571543 RNMTO43148 476 aaKnown RBP28.09■■■□□ 2.09
ABR-213ENST00000571543 ZNF831Q5JPB2 1677 aa28.08■■■□□ 2.09
ABR-213ENST00000571543 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.08■■■□□ 2.09
ABR-213ENST00000571543 SLC52A2Q9HAB3 445 aa28.08■■■□□ 2.09
ABR-213ENST00000571543 COL5A3P25940 1745 aaPredicted RBP28.08■■■□□ 2.09
ABR-213ENST00000571543 PTCD1O75127 700 aaKnown RBP28.07■■■□□ 2.08
ABR-213ENST00000571543 NUDCQ9Y266 331 aa28.07■■■□□ 2.08
ABR-213ENST00000571543 GNPATO15228 680 aa28.06■■■□□ 2.08
ABR-213ENST00000571543 SSFA2P28290 1259 aa28.05■■■□□ 2.08
ABR-213ENST00000571543 GPR162Q16538 588 aa28.05■■■□□ 2.08
ABR-213ENST00000571543 RSPH6AQ9H0K4 717 aa28.04■■■□□ 2.08
ABR-213ENST00000571543 U2AF1L5P0DN76 240 aaPredicted RBP28.03■■■□□ 2.08
ABR-213ENST00000571543 PRKAR2BP31323 418 aa28.03■■■□□ 2.08
ABR-213ENST00000571543 U2AF1Q01081 240 aaKnown RBP eCLIP28.03■■■□□ 2.08
ABR-213ENST00000571543 ZNF784Q8NCA9 323 aaPredicted RBP28.03■■■□□ 2.08
ABR-213ENST00000571543 GAS2L2Q8NHY3 880 aa28.02■■■□□ 2.08
ABR-213ENST00000571543 PHACTR3Q96KR7 559 aa28.02■■■□□ 2.08
ABR-213ENST00000571543 MRC1P22897 1456 aa28.02■■■□□ 2.08
ABR-213ENST00000571543 DDX10Q13206 875 aaKnown RBP28.01■■■□□ 2.07
ABR-213ENST00000571543 PELP1Q8IZL8 1130 aaKnown RBP28.01■■■□□ 2.07
ABR-213ENST00000571543 ADAMTS7Q9UKP4 1686 aa28■■■□□ 2.07
ABR-213ENST00000571543 SLC39A6Q13433 755 aa28■■■□□ 2.07
ABR-213ENST00000571543 RC3H1Q5TC82 1133 aaKnown RBP28■■■□□ 2.07
ABR-213ENST00000571543 GNAT3A8MTJ3 354 aa27.99■■■□□ 2.07
ABR-213ENST00000571543 RTCBQ9Y3I0 505 aaKnown RBP27.99■■■□□ 2.07
ABR-213ENST00000571543 MYH14Q7Z406 1995 aaKnown RBP27.99■■■□□ 2.07
ABR-213ENST00000571543 CNTNAP4Q9C0A0 1308 aa27.98■■■□□ 2.07
ABR-213ENST00000571543 IL17REQ8NFR9 667 aa27.98■■■□□ 2.07
ABR-213ENST00000571543 C4AP0C0L4 1744 aa27.98■■■□□ 2.07
ABR-213ENST00000571543 FCHSD2O94868 740 aa27.96■■■□□ 2.07
ABR-213ENST00000571543 TRAPPC3LQ5T215 181 aa27.96■■■□□ 2.07
ABR-213ENST00000571543 YBX3P16989 372 aaKnown RBP eCLIP27.95■■■□□ 2.06
ABR-213ENST00000571543 TJP1Q07157 1748 aa27.95■■■□□ 2.06
ABR-213ENST00000571543 RPS6KA4O75676 772 aa27.94■■■□□ 2.06
ABR-213ENST00000571543 CRKLP46109 303 aaKnown RBP27.94■■■□□ 2.06
ABR-213ENST00000571543 KIF13BQ9NQT8 1826 aa27.94■■■□□ 2.06
ABR-213ENST00000571543 CICQ96RK0 1608 aaPredicted RBP27.93■■■□□ 2.06
ABR-213ENST00000571543 ARHGEF1Q92888 912 aaKnown RBP27.93■■■□□ 2.06
ABR-213ENST00000571543 TEFQ10587 303 aa27.92■■■□□ 2.06
ABR-213ENST00000571543 DNAJC10Q8IXB1 793 aa27.92■■■□□ 2.06
ABR-213ENST00000571543 CD2APQ9Y5K6 639 aa27.92■■■□□ 2.06
ABR-213ENST00000571543 ADRA2BP18089 450 aa27.91■■■□□ 2.06
ABR-213ENST00000571543 KIAA1551Q9HCM1 1747 aa27.9■■■□□ 2.06
ABR-213ENST00000571543 RALBP1Q15311 655 aa27.9■■■□□ 2.06
ABR-213ENST00000571543 KCPQ6ZWJ8 1503 aa27.9■■■□□ 2.06
ABR-213ENST00000571543 INTS5Q6P9B9 1019 aaKnown RBP27.89■■■□□ 2.06
ABR-213ENST00000571543 CEMIPQ8WUJ3 1361 aa27.88■■■□□ 2.05
ABR-213ENST00000571543 RFC4P35249 363 aa27.88■■■□□ 2.05
ABR-213ENST00000571543 TTC5Q8N0Z6 440 aa27.87■■■□□ 2.05
ABR-213ENST00000571543 N4BP2Q86UW6 1770 aaPredicted RBP27.86■■■□□ 2.05
ABR-213ENST00000571543 CYP19A1P11511 503 aaPredicted RBP27.86■■■□□ 2.05
ABR-213ENST00000571543 GRIN3BO60391 1043 aa27.85■■■□□ 2.05
ABR-213ENST00000571543 ZNF790Q6PG37 636 aa27.85■■■□□ 2.05
ABR-213ENST00000571543 VSIG10Q8N0Z9 540 aa27.85■■■□□ 2.05
ABR-213ENST00000571543 CCDC87Q9NVE4 849 aa27.85■■■□□ 2.05
ABR-213ENST00000571543 SIPA1L3O60292 1781 aaPredicted RBP27.84■■■□□ 2.05
ABR-213ENST00000571543 MMP10P09238 476 aa27.84■■■□□ 2.05
ABR-213ENST00000571543 GYS1P13807 737 aa27.84■■■□□ 2.05
ABR-213ENST00000571543 MCM10Q7L590 875 aa27.84■■■□□ 2.05
ABR-213ENST00000571543 NLGN1Q8N2Q7 840 aa27.84■■■□□ 2.05
ABR-213ENST00000571543 RTF1Q92541 710 aaKnown RBP27.84■■■□□ 2.05
ABR-213ENST00000571543 UBR2Q8IWV8 1755 aa27.83■■■□□ 2.05
ABR-213ENST00000571543 ZNF496Q96IT1 587 aaPredicted RBP27.83■■■□□ 2.05
ABR-213ENST00000571543 ZEB1P37275 1124 aaPredicted RBP27.82■■■□□ 2.04
ABR-213ENST00000571543 BRCA1P38398 1863 aaKnown RBP27.81■■■□□ 2.04
ABR-213ENST00000571543 BTBD11A6QL63 1104 aa27.81■■■□□ 2.04
ABR-213ENST00000571543 DCTN1Q14203 1278 aa27.81■■■□□ 2.04
ABR-213ENST00000571543 PLEKHF1Q96S99 279 aa27.81■■■□□ 2.04
ABR-213ENST00000571543 SRP68Q9UHB9 627 aaKnown RBP27.81■■■□□ 2.04
ABR-213ENST00000571543 NEFMP07197 916 aa27.8■■■□□ 2.04
ABR-213ENST00000571543 SOS1Q07889 1333 aaPredicted RBP27.79■■■□□ 2.04
ABR-213ENST00000571543 KCNQ3O43525 872 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms