RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 PHF23Q9BUL5 403 aaPredicted RBP13.26□□□□□ -0.29
PCDHGA4-201ENST00000571252 NCKAP5LQ9HCH0 1330 aa13.26□□□□□ -0.29
PCDHGA4-201ENST00000571252 FAM83GA6ND36 823 aa13.26□□□□□ -0.29
PCDHGA4-201ENST00000571252 GOLGA6L1Q8N7Z2 621 aa13.26□□□□□ -0.29
PCDHGA4-201ENST00000571252 NAT10Q9H0A0 1025 aaKnown RBP13.26□□□□□ -0.29
PCDHGA4-201ENST00000571252 PDRG1Q9NUG6 133 aa13.26□□□□□ -0.29
PCDHGA4-201ENST00000571252 TRIM35Q9UPQ4 493 aa13.26□□□□□ -0.29
PCDHGA4-201ENST00000571252 STK3Q13188 491 aa13.25□□□□□ -0.29
PCDHGA4-201ENST00000571252 YTHDC2Q9H6S0 1430 aaKnown RBP13.25□□□□□ -0.29
PCDHGA4-201ENST00000571252 SDSP20132 328 aa13.25□□□□□ -0.29
PCDHGA4-201ENST00000571252 TRIM29Q14134 588 aa13.25□□□□□ -0.29
PCDHGA4-201ENST00000571252 POLKQ9UBT6 870 aa13.25□□□□□ -0.29
PCDHGA4-201ENST00000571252 TRDNQ13061 729 aa13.25□□□□□ -0.29
PCDHGA4-201ENST00000571252 BLOC1S2Q6QNY1 142 aa13.25□□□□□ -0.29
PCDHGA4-201ENST00000571252 RASSF8Q8NHQ8 419 aa13.25□□□□□ -0.29
PCDHGA4-201ENST00000571252 ZSCAN31Q96LW9 406 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA4-201ENST00000571252 USP25Q9UHP3 1055 aa13.25□□□□□ -0.29
PCDHGA4-201ENST00000571252 NUP62CLQ9H1M0 184 aa13.24□□□□□ -0.29
PCDHGA4-201ENST00000571252 APPP05067 770 aa13.24□□□□□ -0.29
PCDHGA4-201ENST00000571252 CASTP20810 708 aaKnown RBP13.24□□□□□ -0.29
PCDHGA4-201ENST00000571252 FERMT3Q86UX7 667 aa13.24□□□□□ -0.29
PCDHGA4-201ENST00000571252 MNS1Q8NEH6 495 aa13.24□□□□□ -0.29
PCDHGA4-201ENST00000571252 PHACTR3Q96KR7 559 aa13.24□□□□□ -0.29
PCDHGA4-201ENST00000571252 ANKRD1Q15327 319 aa13.24□□□□□ -0.29
PCDHGA4-201ENST00000571252 CCDC183Q5T5S1 534 aa13.24□□□□□ -0.29
PCDHGA4-201ENST00000571252 FMNL2Q96PY5 1086 aa13.24□□□□□ -0.29
PCDHGA4-201ENST00000571252 ABCC3O15438 1527 aa13.23□□□□□ -0.29
PCDHGA4-201ENST00000571252 WASLO00401 505 aaPredicted RBP13.23□□□□□ -0.29
PCDHGA4-201ENST00000571252 CCDC83Q8IWF9 413 aa13.23□□□□□ -0.29
PCDHGA4-201ENST00000571252 KIF1BPQ96EK5 621 aa13.23□□□□□ -0.29
PCDHGA4-201ENST00000571252 SLC26A8Q96RN1 970 aa13.23□□□□□ -0.29
PCDHGA4-201ENST00000571252 KIDINS220Q9ULH0 1771 aa13.23□□□□□ -0.29
PCDHGA4-201ENST00000571252 MCM5P33992 734 aa13.23□□□□□ -0.29
PCDHGA4-201ENST00000571252 CCDC112Q8NEF3 446 aa13.23□□□□□ -0.29
PCDHGA4-201ENST00000571252 DNAJC2Q99543 621 aaKnown RBP13.23□□□□□ -0.29
PCDHGA4-201ENST00000571252 TSHZ3Q63HK5 1081 aa13.23□□□□□ -0.29
PCDHGA4-201ENST00000571252 RALYLQ86SE5 291 aaKnown RBP13.23□□□□□ -0.29
PCDHGA4-201ENST00000571252 MRPL50Q8N5N7 158 aaKnown RBP13.23□□□□□ -0.29
PCDHGA4-201ENST00000571252 SYTL4Q96C24 671 aaPredicted RBP13.23□□□□□ -0.29
PCDHGA4-201ENST00000571252 SPATA32Q96LK8 384 aa13.23□□□□□ -0.29
PCDHGA4-201ENST00000571252 PTPRCP08575 1304 aa13.22□□□□□ -0.29
PCDHGA4-201ENST00000571252 ADGRB3O60242 1522 aa13.22□□□□□ -0.29
PCDHGA4-201ENST00000571252 PES1O00541 588 aaKnown RBP13.22□□□□□ -0.29
PCDHGA4-201ENST00000571252 RAPGEF4Q8WZA2 1011 aa13.22□□□□□ -0.29
PCDHGA4-201ENST00000571252 TMX3Q96JJ7 454 aa13.22□□□□□ -0.29
PCDHGA4-201ENST00000571252 SIL1Q9H173 461 aa13.22□□□□□ -0.29
PCDHGA4-201ENST00000571252 HECW2Q9P2P5 1572 aa13.22□□□□□ -0.29
PCDHGA4-201ENST00000571252 AACSQ86V21 672 aa13.22□□□□□ -0.29
PCDHGA4-201ENST00000571252 C16orf71Q8IYS4 520 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA4-201ENST00000571252 ARGLU1Q9NWB6 273 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA4-201ENST00000571252 RBM25P49756 843 aaKnown RBP13.22□□□□□ -0.29
PCDHGA4-201ENST00000571252 TEX35Q5T0J7 233 aa13.22□□□□□ -0.29
PCDHGA4-201ENST00000571252 MEIS3Q99687 375 aa13.22□□□□□ -0.29
PCDHGA4-201ENST00000571252 PPP6R1Q9UPN7 881 aa13.22□□□□□ -0.29
PCDHGA4-201ENST00000571252 VAMP4O75379 141 aa13.21□□□□□ -0.29
PCDHGA4-201ENST00000571252 TPM1P09493 284 aa13.21□□□□□ -0.29
PCDHGA4-201ENST00000571252 MAP3K11Q16584 847 aa13.21□□□□□ -0.29
PCDHGA4-201ENST00000571252 ANKRD44Q8N8A2 993 aa13.21□□□□□ -0.29
PCDHGA4-201ENST00000571252 C8orf58Q8NAV2 365 aa13.21□□□□□ -0.29
PCDHGA4-201ENST00000571252 GLRX3O76003 335 aaKnown RBP13.21□□□□□ -0.29
PCDHGA4-201ENST00000571252 AKAP17AQ02040 695 aaKnown RBP13.21□□□□□ -0.29
PCDHGA4-201ENST00000571252 WASHC4Q2M389 1173 aa13.21□□□□□ -0.29
PCDHGA4-201ENST00000571252 LRSAM1Q6UWE0 723 aa13.21□□□□□ -0.29
PCDHGA4-201ENST00000571252 GPS2Q13227 327 aa13.21□□□□□ -0.29
PCDHGA4-201ENST00000571252 MEX3CQ5U5Q3 659 aaKnown RBP13.21□□□□□ -0.29
PCDHGA4-201ENST00000571252 TSPYL6Q8N831 410 aa13.21□□□□□ -0.29
PCDHGA4-201ENST00000571252 LRRFIP2Q9Y608 721 aaKnown RBP13.21□□□□□ -0.29
PCDHGA4-201ENST00000571252 PLEKHO1Q53GL0 409 aaPredicted RBP13.21□□□□□ -0.3
PCDHGA4-201ENST00000571252 DEPDC5O75140 1603 aa13.21□□□□□ -0.3
PCDHGA4-201ENST00000571252 SMC2O95347 1197 aa13.2□□□□□ -0.3
PCDHGA4-201ENST00000571252 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
PCDHGA4-201ENST00000571252 DDX54Q8TDD1 881 aaKnown RBP13.2□□□□□ -0.3
PCDHGA4-201ENST00000571252 LIMCH1Q9UPQ0 1083 aa13.2□□□□□ -0.3
PCDHGA4-201ENST00000571252 VWDEQ8N2E2 1590 aa13.2□□□□□ -0.3
PCDHGA4-201ENST00000571252 PRIM1P49642 420 aaKnown RBP13.2□□□□□ -0.3
PCDHGA4-201ENST00000571252 HOOK1Q9UJC3 728 aaKnown RBP13.2□□□□□ -0.3
PCDHGA4-201ENST00000571252 PRPF40BQ6NWY9 871 aaKnown RBP13.2□□□□□ -0.3
PCDHGA4-201ENST00000571252 ZNF530Q6P9A1 599 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA4-201ENST00000571252 PLEKHF1Q96S99 279 aa13.2□□□□□ -0.3
PCDHGA4-201ENST00000571252 NEO1Q92859 1461 aa13.2□□□□□ -0.3
PCDHGA4-201ENST00000571252 GNAT3A8MTJ3 354 aa13.19□□□□□ -0.3
PCDHGA4-201ENST00000571252 RAB11FIP3O75154 756 aa13.19□□□□□ -0.3
PCDHGA4-201ENST00000571252 CAMK4Q16566 473 aa13.19□□□□□ -0.3
PCDHGA4-201ENST00000571252 PDCL2Q8N4E4 241 aa13.19□□□□□ -0.3
PCDHGA4-201ENST00000571252 FILIP1Q7Z7B0 1213 aa13.19□□□□□ -0.3
PCDHGA4-201ENST00000571252 ZNF396Q96N95 335 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA4-201ENST00000571252 ME1P48163 572 aa13.19□□□□□ -0.3
PCDHGA4-201ENST00000571252 FLIIQ13045 1269 aa13.19□□□□□ -0.3
PCDHGA4-201ENST00000571252 STK38Q15208 465 aa13.19□□□□□ -0.3
PCDHGA4-201ENST00000571252 TSR1Q2NL82 804 aaKnown RBP13.19□□□□□ -0.3
PCDHGA4-201ENST00000571252 NFXL1Q6ZNB6 911 aa13.19□□□□□ -0.3
PCDHGA4-201ENST00000571252 DCTPP1Q9H773 170 aa13.19□□□□□ -0.3
PCDHGA4-201ENST00000571252 PDIA4P13667 645 aaKnown RBP13.19□□□□□ -0.3
PCDHGA4-201ENST00000571252 PDE1AP54750 535 aa13.18□□□□□ -0.3
PCDHGA4-201ENST00000571252 ZMYND15Q9H091 742 aa13.18□□□□□ -0.3
PCDHGA4-201ENST00000571252 NLRP2Q9NX02 1062 aa13.18□□□□□ -0.3
PCDHGA4-201ENST00000571252 MROH2AA6NES4 1674 aa13.18□□□□□ -0.3
PCDHGA4-201ENST00000571252 QRICH2Q9H0J4 1663 aa13.18□□□□□ -0.3
PCDHGA4-201ENST00000571252 PLEKHM2Q8IWE5 1019 aa13.18□□□□□ -0.3
PCDHGA4-201ENST00000571252 MROH1Q8NDA8 1641 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms