RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 KDM6AO15550 1401 aaPredicted RBP17.01■□□□□ 0.31
TVP23B-204ENST00000571018 AKAP4Q5JQC9 854 aa17■□□□□ 0.31
TVP23B-204ENST00000571018 HMGB2P26583 209 aaKnown RBP16.99■□□□□ 0.31
TVP23B-204ENST00000571018 MTHFSDQ2M296 383 aaKnown RBP16.99■□□□□ 0.31
TVP23B-204ENST00000571018 PDGFDQ9GZP0 370 aaPredicted RBP16.99■□□□□ 0.31
TVP23B-204ENST00000571018 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
TVP23B-204ENST00000571018 CASZ1Q86V15 1759 aa16.98■□□□□ 0.31
TVP23B-204ENST00000571018 CABP4P57796 275 aa16.98■□□□□ 0.31
TVP23B-204ENST00000571018 RALBP1Q15311 655 aa16.98■□□□□ 0.31
TVP23B-204ENST00000571018 SPON1Q9HCB6 807 aa16.98■□□□□ 0.31
TVP23B-204ENST00000571018 ATG3Q9NT62 314 aa16.98■□□□□ 0.31
TVP23B-204ENST00000571018 LOC102724428A0A0B4J2F2 783 aa16.96■□□□□ 0.31
TVP23B-204ENST00000571018 U2AF1L5P0DN76 240 aaPredicted RBP16.96■□□□□ 0.31
TVP23B-204ENST00000571018 SIK1P57059 783 aa16.96■□□□□ 0.31
TVP23B-204ENST00000571018 U2AF1Q01081 240 aaKnown RBP eCLIP16.96■□□□□ 0.31
TVP23B-204ENST00000571018 RSPH6AQ9H0K4 717 aa16.96■□□□□ 0.31
TVP23B-204ENST00000571018 NFATC2IPQ8NCF5 419 aa16.95■□□□□ 0.3
TVP23B-204ENST00000571018 TFCP2L1Q9NZI6 479 aa16.95■□□□□ 0.3
TVP23B-204ENST00000571018 FCHSD2O94868 740 aa16.94■□□□□ 0.3
TVP23B-204ENST00000571018 PRKAR2BP31323 418 aa16.94■□□□□ 0.3
TVP23B-204ENST00000571018 GAS2L2Q8NHY3 880 aa16.94■□□□□ 0.3
TVP23B-204ENST00000571018 LGR6Q9HBX8 967 aa16.94■□□□□ 0.3
TVP23B-204ENST00000571018 PNPLA7Q6ZV29 1317 aa16.94■□□□□ 0.3
TVP23B-204ENST00000571018 SCN11AQ9UI33 1791 aa16.93■□□□□ 0.3
TVP23B-204ENST00000571018 RNMTO43148 476 aaKnown RBP16.93■□□□□ 0.3
TVP23B-204ENST00000571018 ZBTB7AO95365 584 aa16.93■□□□□ 0.3
TVP23B-204ENST00000571018 MTFR1LQ9H019 292 aa16.93■□□□□ 0.3
TVP23B-204ENST00000571018 C5P01031 1676 aa16.93■□□□□ 0.3
TVP23B-204ENST00000571018 DSG3P32926 999 aa16.92■□□□□ 0.3
TVP23B-204ENST00000571018 ATP6V1AP38606 617 aa16.92■□□□□ 0.3
TVP23B-204ENST00000571018 SLC16A10Q8TF71 515 aa16.92■□□□□ 0.3
TVP23B-204ENST00000571018 PHACTR3Q96KR7 559 aa16.92■□□□□ 0.3
TVP23B-204ENST00000571018 SLC52A2Q9HAB3 445 aa16.92■□□□□ 0.3
TVP23B-204ENST00000571018 QSER1Q2KHR3 1735 aa16.92■□□□□ 0.3
TVP23B-204ENST00000571018 ADAMTS7Q9UKP4 1686 aa16.91■□□□□ 0.3
TVP23B-204ENST00000571018 GNAT3A8MTJ3 354 aa16.91■□□□□ 0.3
TVP23B-204ENST00000571018 ITPK1Q13572 414 aa16.91■□□□□ 0.3
TVP23B-204ENST00000571018 TAF1LQ8IZX4 1826 aa16.91■□□□□ 0.3
TVP23B-204ENST00000571018 MAP3K5Q99683 1374 aa16.9■□□□□ 0.3
TVP23B-204ENST00000571018 PTGER2P43116 358 aa16.9■□□□□ 0.3
TVP23B-204ENST00000571018 SLC4A9Q96Q91 983 aa16.9■□□□□ 0.3
TVP23B-204ENST00000571018 RBM42Q9BTD8 480 aaKnown RBP16.9■□□□□ 0.3
TVP23B-204ENST00000571018 MRC1P22897 1456 aa16.9■□□□□ 0.3
TVP23B-204ENST00000571018 MYBBP1AQ9BQG0 1328 aaKnown RBP16.9■□□□□ 0.3
TVP23B-204ENST00000571018 LINC00116Q8NCU8 138 aa16.89■□□□□ 0.29
TVP23B-204ENST00000571018 IL17REQ8NFR9 667 aa16.89■□□□□ 0.29
TVP23B-204ENST00000571018 C4BP0C0L5 1744 aa16.89■□□□□ 0.29
TVP23B-204ENST00000571018 ZNF831Q5JPB2 1677 aa16.88■□□□□ 0.29
TVP23B-204ENST00000571018 ZNF316A6NFI3 1004 aaPredicted RBP16.88■□□□□ 0.29
TVP23B-204ENST00000571018 POLA2Q14181 598 aa16.88■□□□□ 0.29
TVP23B-204ENST00000571018 COL23A1Q86Y22 540 aaPredicted RBP16.88■□□□□ 0.29
TVP23B-204ENST00000571018 FLAD1Q8NFF5 587 aa16.88■□□□□ 0.29
TVP23B-204ENST00000571018 AK7Q96M32 723 aa16.88■□□□□ 0.29
TVP23B-204ENST00000571018 SGIP1Q9BQI5 828 aa16.88■□□□□ 0.29
TVP23B-204ENST00000571018 TUBGCP6Q96RT7 1819 aa16.88■□□□□ 0.29
TVP23B-204ENST00000571018 PTCD1O75127 700 aaKnown RBP16.87■□□□□ 0.29
TVP23B-204ENST00000571018 PRKRIP1Q9H875 184 aaPredicted RBP16.87■□□□□ 0.29
TVP23B-204ENST00000571018 PPP1R1BQ9UD71 204 aaPredicted RBP16.87■□□□□ 0.29
TVP23B-204ENST00000571018 TEFQ10587 303 aa16.85■□□□□ 0.29
TVP23B-204ENST00000571018 AMIGO3Q86WK7 504 aa16.85■□□□□ 0.29
TVP23B-204ENST00000571018 PLEKHF1Q96S99 279 aa16.85■□□□□ 0.29
TVP23B-204ENST00000571018 CEMIPQ8WUJ3 1361 aa16.85■□□□□ 0.29
TVP23B-204ENST00000571018 NEFMP07197 916 aa16.84■□□□□ 0.29
TVP23B-204ENST00000571018 SSFA2P28290 1259 aa16.84■□□□□ 0.29
TVP23B-204ENST00000571018 SLC39A6Q13433 755 aa16.84■□□□□ 0.29
TVP23B-204ENST00000571018 RC3H1Q5TC82 1133 aaKnown RBP16.84■□□□□ 0.29
TVP23B-204ENST00000571018 PNNQ9H307 717 aaKnown RBP16.84■□□□□ 0.29
TVP23B-204ENST00000571018 SRCAPQ6ZRS2 3230 aa16.84■□□□□ 0.29
TVP23B-204ENST00000571018 VIRMAQ69YN4 1812 aaKnown RBP16.84■□□□□ 0.29
TVP23B-204ENST00000571018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.83■□□□□ 0.28
TVP23B-204ENST00000571018 GNPATO15228 680 aa16.83■□□□□ 0.28
TVP23B-204ENST00000571018 HTATSF1O43719 755 aaKnown RBP16.83■□□□□ 0.28
TVP23B-204ENST00000571018 ABCB7O75027 752 aa16.83■□□□□ 0.28
TVP23B-204ENST00000571018 CNTNAP4Q9C0A0 1308 aa16.83■□□□□ 0.28
TVP23B-204ENST00000571018 PHF14O94880 888 aa16.82■□□□□ 0.28
TVP23B-204ENST00000571018 SMIM5Q71RC9 77 aa16.82■□□□□ 0.28
TVP23B-204ENST00000571018 RTF1Q92541 710 aaKnown RBP16.82■□□□□ 0.28
TVP23B-204ENST00000571018 UBR3Q6ZT12 1888 aa16.82■□□□□ 0.28
TVP23B-204ENST00000571018 COL24A1Q17RW2 1714 aa16.82■□□□□ 0.28
TVP23B-204ENST00000571018 CICQ96RK0 1608 aaPredicted RBP16.81■□□□□ 0.28
TVP23B-204ENST00000571018 POLD1P28340 1107 aa16.81■□□□□ 0.28
TVP23B-204ENST00000571018 ARXQ96QS3 562 aa16.81■□□□□ 0.28
TVP23B-204ENST00000571018 RTCBQ9Y3I0 505 aaKnown RBP16.81■□□□□ 0.28
TVP23B-204ENST00000571018 COL5A3P25940 1745 aaPredicted RBP16.81■□□□□ 0.28
TVP23B-204ENST00000571018 KCPQ6ZWJ8 1503 aa16.8■□□□□ 0.28
TVP23B-204ENST00000571018 RPS6KA4O75676 772 aa16.8■□□□□ 0.28
TVP23B-204ENST00000571018 VSIG10Q8N0Z9 540 aa16.8■□□□□ 0.28
TVP23B-204ENST00000571018 TJP1Q07157 1748 aa16.79■□□□□ 0.28
TVP23B-204ENST00000571018 CRKLP46109 303 aaKnown RBP16.79■□□□□ 0.28
TVP23B-204ENST00000571018 ZNF790Q6PG37 636 aa16.79■□□□□ 0.28
TVP23B-204ENST00000571018 MCM10Q7L590 875 aa16.79■□□□□ 0.28
TVP23B-204ENST00000571018 DNAJC10Q8IXB1 793 aa16.79■□□□□ 0.28
TVP23B-204ENST00000571018 TTC5Q8N0Z6 440 aa16.79■□□□□ 0.28
TVP23B-204ENST00000571018 SIPA1L3O60292 1781 aaPredicted RBP16.79■□□□□ 0.28
TVP23B-204ENST00000571018 MAPK8IP3Q9UPT6 1336 aa16.78■□□□□ 0.28
TVP23B-204ENST00000571018 DCTN1Q14203 1278 aa16.78■□□□□ 0.28
TVP23B-204ENST00000571018 NFE2L2Q16236 605 aa16.78■□□□□ 0.28
TVP23B-204ENST00000571018 TRAPPC3LQ5T215 181 aa16.78■□□□□ 0.28
TVP23B-204ENST00000571018 FHDC1Q9C0D6 1143 aaPredicted RBP16.78■□□□□ 0.28
TVP23B-204ENST00000571018 UBR2Q8IWV8 1755 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1528.7 ms