RNA–Protein interactions for RNA: ENST00000570989.1

ITGA3-216, Transcript of integrin subunit alpha 3, humanhuman

Gene ITGA3, Length 2,495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-216ENST00000570989 MBIPQ9NS73 344 aa17.8■□□□□ 0.44
ITGA3-216ENST00000570989 ZKSCAN5Q9Y2L8 839 aa17.8■□□□□ 0.44
ITGA3-216ENST00000570989 ELL2O00472 640 aaPredicted RBP17.79■□□□□ 0.44
ITGA3-216ENST00000570989 OTUD7AQ8TE49 926 aaPredicted RBP17.79■□□□□ 0.44
ITGA3-216ENST00000570989 CWC22Q9HCG8 908 aaKnown RBP17.79■□□□□ 0.44
ITGA3-216ENST00000570989 TMEM63CQ9P1W3 806 aa17.79■□□□□ 0.44
ITGA3-216ENST00000570989 IFT57Q9NWB7 429 aa17.78■□□□□ 0.44
ITGA3-216ENST00000570989 NSFL1CQ9UNZ2 370 aaKnown RBP17.78■□□□□ 0.44
ITGA3-216ENST00000570989 ATP10DQ9P241 1426 aa17.78■□□□□ 0.44
ITGA3-216ENST00000570989 FAM13BQ9NYF5 915 aa17.78■□□□□ 0.44
ITGA3-216ENST00000570989 HMOX1P09601 288 aa17.77■□□□□ 0.44
ITGA3-216ENST00000570989 TTC21AQ8NDW8 1320 aa17.77■□□□□ 0.44
ITGA3-216ENST00000570989 USP31Q70CQ4 1352 aa17.77■□□□□ 0.44
ITGA3-216ENST00000570989 DLG5Q8TDM6 1919 aa17.77■□□□□ 0.44
ITGA3-216ENST00000570989 UQCRHLA0A096LP55 91 aa17.77■□□□□ 0.43
ITGA3-216ENST00000570989 UQCRHP07919 91 aa17.77■□□□□ 0.43
ITGA3-216ENST00000570989 GNAI1P63096 354 aa17.77■□□□□ 0.43
ITGA3-216ENST00000570989 INTS3Q68E01 1043 aaKnown RBP17.77■□□□□ 0.43
ITGA3-216ENST00000570989 LRSAM1Q6UWE0 723 aa17.77■□□□□ 0.43
ITGA3-216ENST00000570989 C8orf58Q8NAV2 365 aa17.77■□□□□ 0.43
ITGA3-216ENST00000570989 NGDNQ8NEJ9 315 aaKnown RBP17.77■□□□□ 0.43
ITGA3-216ENST00000570989 KIF24Q5T7B8 1368 aa17.77■□□□□ 0.43
ITGA3-216ENST00000570989 TWISTNBQ3B726 338 aaPredicted RBP17.76■□□□□ 0.43
ITGA3-216ENST00000570989 SDSP20132 328 aa17.76■□□□□ 0.43
ITGA3-216ENST00000570989 CFAP44Q96MT7 982 aa17.76■□□□□ 0.43
ITGA3-216ENST00000570989 PIK3C2AO00443 1686 aa17.76■□□□□ 0.43
ITGA3-216ENST00000570989 PEAK1Q9H792 1746 aa17.76■□□□□ 0.43
ITGA3-216ENST00000570989 MAP7D2Q96T17 732 aa17.75■□□□□ 0.43
ITGA3-216ENST00000570989 API5Q9BZZ5 524 aaKnown RBP17.75■□□□□ 0.43
ITGA3-216ENST00000570989 SYCE3A1L190 88 aa17.75■□□□□ 0.43
ITGA3-216ENST00000570989 MCM5P33992 734 aa17.75■□□□□ 0.43
ITGA3-216ENST00000570989 PRDM4Q9UKN5 801 aa17.75■□□□□ 0.43
ITGA3-216ENST00000570989 RBM33Q96EV2 1170 aaKnown RBP17.74■□□□□ 0.43
ITGA3-216ENST00000570989 A0A0U1RQG5 324 aaPredicted RBP17.74■□□□□ 0.43
ITGA3-216ENST00000570989 NWD1Q149M9 1564 aa17.74■□□□□ 0.43
ITGA3-216ENST00000570989 RGS12O14924 1447 aa17.73■□□□□ 0.43
ITGA3-216ENST00000570989 ST18O60284 1047 aa17.73■□□□□ 0.43
ITGA3-216ENST00000570989 ANKRD44Q8N8A2 993 aa17.73■□□□□ 0.43
ITGA3-216ENST00000570989 CERKQ8TCT0 537 aa17.73■□□□□ 0.43
ITGA3-216ENST00000570989 CSPP1Q1MSJ5 1256 aa17.72■□□□□ 0.43
ITGA3-216ENST00000570989 CCDC39Q9UFE4 941 aa17.72■□□□□ 0.43
ITGA3-216ENST00000570989 ADGRL3Q9HAR2 1447 aa17.71■□□□□ 0.43
ITGA3-216ENST00000570989 DYNC1I1O14576 645 aa17.71■□□□□ 0.43
ITGA3-216ENST00000570989 SMARCA5O60264 1052 aaPredicted RBP17.71■□□□□ 0.43
ITGA3-216ENST00000570989 EIF4A2Q14240 407 aaKnown RBP17.71■□□□□ 0.42
ITGA3-216ENST00000570989 SOX12O15370 315 aa17.7■□□□□ 0.42
ITGA3-216ENST00000570989 CEP85Q6P2H3 762 aa17.7■□□□□ 0.42
ITGA3-216ENST00000570989 RGPD1P0DJD0 1748 aa17.69■□□□□ 0.42
ITGA3-216ENST00000570989 MARF1Q9Y4F3 1742 aaKnown RBP17.69■□□□□ 0.42
ITGA3-216ENST00000570989 SASS6Q6UVJ0 657 aa17.69■□□□□ 0.42
ITGA3-216ENST00000570989 FOXD4L5Q5VV16 416 aaPredicted RBP17.69■□□□□ 0.42
ITGA3-216ENST00000570989 RNF214Q8ND24 703 aa17.69■□□□□ 0.42
ITGA3-216ENST00000570989 FOXD4L4Q8WXT5 416 aaPredicted RBP17.69■□□□□ 0.42
ITGA3-216ENST00000570989 USP54Q70EL1 1684 aa17.69■□□□□ 0.42
ITGA3-216ENST00000570989 MAP3K19Q56UN5 1328 aa17.68■□□□□ 0.42
ITGA3-216ENST00000570989 HSP90AB2PQ58FF8 381 aa17.68■□□□□ 0.42
ITGA3-216ENST00000570989 FAM83GA6ND36 823 aa17.67■□□□□ 0.42
ITGA3-216ENST00000570989 REC8O95072 547 aa17.67■□□□□ 0.42
ITGA3-216ENST00000570989 MBD3O95983 291 aa17.67■□□□□ 0.42
ITGA3-216ENST00000570989 RTL1A6NKG5 1358 aa17.67■□□□□ 0.42
ITGA3-216ENST00000570989 ERC2O15083 957 aa17.66■□□□□ 0.42
ITGA3-216ENST00000570989 BRD1O95696 1058 aa17.66■□□□□ 0.42
ITGA3-216ENST00000570989 CASC1Q6TDU7 716 aa17.66■□□□□ 0.42
ITGA3-216ENST00000570989 RPAP2Q8IXW5 612 aaPredicted RBP17.66■□□□□ 0.42
ITGA3-216ENST00000570989 TMX3Q96JJ7 454 aa17.66■□□□□ 0.42
ITGA3-216ENST00000570989 SBNO1A3KN83 1393 aa17.66■□□□□ 0.42
ITGA3-216ENST00000570989 FLT4P35916 1363 aa17.66■□□□□ 0.42
ITGA3-216ENST00000570989 MSH6P52701 1360 aa17.66■□□□□ 0.42
ITGA3-216ENST00000570989 AEBP1Q8IUX7 1158 aa17.66■□□□□ 0.42
ITGA3-216ENST00000570989 TUBGCP6Q96RT7 1819 aa17.66■□□□□ 0.42
ITGA3-216ENST00000570989 APBB1O00213 710 aa17.65■□□□□ 0.42
ITGA3-216ENST00000570989 PHF8Q9UPP1 1060 aa17.65■□□□□ 0.42
ITGA3-216ENST00000570989 NLRP6P59044 892 aa17.65■□□□□ 0.42
ITGA3-216ENST00000570989 KRT24Q2M2I5 525 aa17.65■□□□□ 0.42
ITGA3-216ENST00000570989 SULT6B1Q6IMI4 303 aa17.65■□□□□ 0.42
ITGA3-216ENST00000570989 DCTN1Q14203 1278 aa17.64■□□□□ 0.42
ITGA3-216ENST00000570989 MTERF4Q7Z6M4 381 aaKnown RBP17.64■□□□□ 0.42
ITGA3-216ENST00000570989 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.64■□□□□ 0.42
ITGA3-216ENST00000570989 CUL4AQ13619 759 aa17.63■□□□□ 0.41
ITGA3-216ENST00000570989 TMEM94Q12767 1356 aa17.63■□□□□ 0.41
ITGA3-216ENST00000570989 NEK4P51957 841 aa17.63■□□□□ 0.41
ITGA3-216ENST00000570989 LMOD3Q0VAK6 560 aa17.63■□□□□ 0.41
ITGA3-216ENST00000570989 MEIS3Q99687 375 aa17.63■□□□□ 0.41
ITGA3-216ENST00000570989 TSPY26PQ9H489 355 aa17.63■□□□□ 0.41
ITGA3-216ENST00000570989 PROSER2Q86WR7 435 aaPredicted RBP17.62■□□□□ 0.41
ITGA3-216ENST00000570989 SMAP1Q8IYB5 467 aaPredicted RBP17.62■□□□□ 0.41
ITGA3-216ENST00000570989 ABTB2Q8N961 1025 aa17.62■□□□□ 0.41
ITGA3-216ENST00000570989 ARHGEF10O15013 1369 aa17.62■□□□□ 0.41
ITGA3-216ENST00000570989 NUTM2GQ5VZR2 741 aa17.61■□□□□ 0.41
ITGA3-216ENST00000570989 ARID3AQ99856 593 aa17.61■□□□□ 0.41
ITGA3-216ENST00000570989 BCL11BQ9C0K0 894 aaPredicted RBP17.61■□□□□ 0.41
ITGA3-216ENST00000570989 OSBPL3Q9H4L5 887 aa17.61■□□□□ 0.41
ITGA3-216ENST00000570989 KIAA2012Q0VF49 1180 aa17.61■□□□□ 0.41
ITGA3-216ENST00000570989 C14orf37Q86TY3 774 aa17.61■□□□□ 0.41
ITGA3-216ENST00000570989 PALD1Q9ULE6 856 aa17.61■□□□□ 0.41
ITGA3-216ENST00000570989 AMPHP49418 695 aa17.6■□□□□ 0.41
ITGA3-216ENST00000570989 PDE1AP54750 535 aa17.6■□□□□ 0.41
ITGA3-216ENST00000570989 JARID2Q92833 1246 aaPredicted RBP17.6■□□□□ 0.41
ITGA3-216ENST00000570989 ESCO1Q5FWF5 840 aa17.59■□□□□ 0.41
ITGA3-216ENST00000570989 MYRIPQ8NFW9 859 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms