RNA–Protein interactions for RNA: ENST00000570773.5

ATP2A3-207, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 989 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-207ENST00000570773 BTBD11A6QL63 1104 aa19.3■□□□□ 0.68
ATP2A3-207ENST00000570773 CT47B1P0C2W7 299 aaPredicted RBP19.3■□□□□ 0.68
ATP2A3-207ENST00000570773 RCAN3Q9UKA8 241 aa19.3■□□□□ 0.68
ATP2A3-207ENST00000570773 THSD7AQ9UPZ6 1657 aa19.3■□□□□ 0.68
ATP2A3-207ENST00000570773 A0A0G2JS52 829 aa19.29■□□□□ 0.68
ATP2A3-207ENST00000570773 RBM6P78332 1123 aaKnown RBP19.29■□□□□ 0.68
ATP2A3-207ENST00000570773 MYT1Q01538 1121 aa19.29■□□□□ 0.68
ATP2A3-207ENST00000570773 SEPT12Q8IYM1 358 aa19.29■□□□□ 0.68
ATP2A3-207ENST00000570773 C8orf58Q8NAV2 365 aa19.28■□□□□ 0.68
ATP2A3-207ENST00000570773 RGS17Q9UGC6 210 aaPredicted RBP19.28■□□□□ 0.68
ATP2A3-207ENST00000570773 SCN11AQ9UI33 1791 aa19.27■□□□□ 0.67
ATP2A3-207ENST00000570773 KCNQ3O43525 872 aa19.26■□□□□ 0.67
ATP2A3-207ENST00000570773 TSPYL6Q8N831 410 aa19.26■□□□□ 0.67
ATP2A3-207ENST00000570773 VAMP4O75379 141 aa19.25■□□□□ 0.67
ATP2A3-207ENST00000570773 EIF4A1P60842 406 aaKnown RBP19.25■□□□□ 0.67
ATP2A3-207ENST00000570773 KRT24Q2M2I5 525 aa19.25■□□□□ 0.67
ATP2A3-207ENST00000570773 SUPT16HQ9Y5B9 1047 aaKnown RBP19.25■□□□□ 0.67
ATP2A3-207ENST00000570773 TWISTNBQ3B726 338 aaPredicted RBP19.24■□□□□ 0.67
ATP2A3-207ENST00000570773 ZNF790Q6PG37 636 aa19.24■□□□□ 0.67
ATP2A3-207ENST00000570773 TMOD3Q9NYL9 352 aa19.24■□□□□ 0.67
ATP2A3-207ENST00000570773 ELL2O00472 640 aaPredicted RBP19.23■□□□□ 0.67
ATP2A3-207ENST00000570773 RXRBP28702 533 aa19.23■□□□□ 0.67
ATP2A3-207ENST00000570773 RARSP54136 660 aaKnown RBP19.23■□□□□ 0.67
ATP2A3-207ENST00000570773 SLC39A6Q13433 755 aa19.23■□□□□ 0.67
ATP2A3-207ENST00000570773 PIGBQ92521 554 aa19.23■□□□□ 0.67
ATP2A3-207ENST00000570773 ZNF428Q96B54 188 aa19.23■□□□□ 0.67
ATP2A3-207ENST00000570773 SIPA1L3O60292 1781 aaPredicted RBP19.22■□□□□ 0.67
ATP2A3-207ENST00000570773 PRIM1P49642 420 aaKnown RBP19.22■□□□□ 0.67
ATP2A3-207ENST00000570773 TOGARAM1Q9Y4F4 1720 aa19.22■□□□□ 0.67
ATP2A3-207ENST00000570773 SOS1Q07889 1333 aaPredicted RBP19.22■□□□□ 0.67
ATP2A3-207ENST00000570773 RNF123Q5XPI4 1314 aa19.22■□□□□ 0.67
ATP2A3-207ENST00000570773 HEG1Q9ULI3 1381 aa19.21■□□□□ 0.67
ATP2A3-207ENST00000570773 BCL9O00512 1426 aa19.21■□□□□ 0.67
ATP2A3-207ENST00000570773 POTEAQ6S8J7 498 aa19.21■□□□□ 0.67
ATP2A3-207ENST00000570773 KDM3BQ7LBC6 1761 aa19.2■□□□□ 0.66
ATP2A3-207ENST00000570773 TTC5Q8N0Z6 440 aa19.2■□□□□ 0.66
ATP2A3-207ENST00000570773 BCAR3O75815 825 aa19.19■□□□□ 0.66
ATP2A3-207ENST00000570773 HOXB7P09629 217 aa19.19■□□□□ 0.66
ATP2A3-207ENST00000570773 ALDH1L2Q3SY69 923 aa19.19■□□□□ 0.66
ATP2A3-207ENST00000570773 SSH1Q8WYL5 1049 aa19.19■□□□□ 0.66
ATP2A3-207ENST00000570773 ACSBG1Q96GR2 724 aa19.19■□□□□ 0.66
ATP2A3-207ENST00000570773 SYTL4Q96C24 671 aaPredicted RBP19.18■□□□□ 0.66
ATP2A3-207ENST00000570773 ZNF496Q96IT1 587 aaPredicted RBP19.18■□□□□ 0.66
ATP2A3-207ENST00000570773 GIGYF1O75420 1035 aaPredicted RBP19.17■□□□□ 0.66
ATP2A3-207ENST00000570773 KRT27Q7Z3Y8 459 aa19.17■□□□□ 0.66
ATP2A3-207ENST00000570773 FMNL2Q96PY5 1086 aa19.17■□□□□ 0.66
ATP2A3-207ENST00000570773 ATG3Q9NT62 314 aa19.17■□□□□ 0.66
ATP2A3-207ENST00000570773 RRP1P56182 461 aaKnown RBP19.16■□□□□ 0.66
ATP2A3-207ENST00000570773 FAM182BQ5T319 152 aa19.16■□□□□ 0.66
ATP2A3-207ENST00000570773 BCL2L13Q9BXK5 485 aa19.16■□□□□ 0.66
ATP2A3-207ENST00000570773 SMC4Q9NTJ3 1288 aa19.16■□□□□ 0.66
ATP2A3-207ENST00000570773 ASAP1Q9ULH1 1129 aa19.16■□□□□ 0.66
ATP2A3-207ENST00000570773 VIRMAQ69YN4 1812 aaKnown RBP19.16■□□□□ 0.66
ATP2A3-207ENST00000570773 KCNQ2O43526 872 aa19.15■□□□□ 0.66
ATP2A3-207ENST00000570773 BRPF1P55201 1214 aaPredicted RBP19.15■□□□□ 0.66
ATP2A3-207ENST00000570773 SNRPA1P09661 255 aaKnown RBP19.14■□□□□ 0.65
ATP2A3-207ENST00000570773 MRPL50Q8N5N7 158 aaKnown RBP19.14■□□□□ 0.65
ATP2A3-207ENST00000570773 DOT1LQ8TEK3 1739 aa19.14■□□□□ 0.65
ATP2A3-207ENST00000570773 TCERG1O14776 1098 aaKnown RBP19.13■□□□□ 0.65
ATP2A3-207ENST00000570773 CCDC30Q5VVM6 783 aa19.13■□□□□ 0.65
ATP2A3-207ENST00000570773 CHMP4AQ9BY43 222 aa19.13■□□□□ 0.65
ATP2A3-207ENST00000570773 RGS12O14924 1447 aa19.13■□□□□ 0.65
ATP2A3-207ENST00000570773 KCPQ6ZWJ8 1503 aa19.13■□□□□ 0.65
ATP2A3-207ENST00000570773 PAPPAQ13219 1627 aa19.13■□□□□ 0.65
ATP2A3-207ENST00000570773 PRAMEF22A3QJZ6 481 aa19.12■□□□□ 0.65
ATP2A3-207ENST00000570773 PTCD1O75127 700 aaKnown RBP19.12■□□□□ 0.65
ATP2A3-207ENST00000570773 HDGFL1Q5TGJ6 251 aa19.12■□□□□ 0.65
ATP2A3-207ENST00000570773 FAM196AQ6ZSG2 479 aa19.12■□□□□ 0.65
ATP2A3-207ENST00000570773 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.12■□□□□ 0.65
ATP2A3-207ENST00000570773 PLIN1O60240 522 aa19.11■□□□□ 0.65
ATP2A3-207ENST00000570773 EIF2S2P20042 333 aaKnown RBP19.1■□□□□ 0.65
ATP2A3-207ENST00000570773 PTF1AQ7RTS3 328 aa19.1■□□□□ 0.65
ATP2A3-207ENST00000570773 VSIG10Q8N0Z9 540 aa19.1■□□□□ 0.65
ATP2A3-207ENST00000570773 NECTIN2Q92692 538 aa19.1■□□□□ 0.65
ATP2A3-207ENST00000570773 SMARCC1Q92922 1105 aaPredicted RBP19.1■□□□□ 0.65
ATP2A3-207ENST00000570773 ITGB4P16144 1822 aa19.09■□□□□ 0.65
ATP2A3-207ENST00000570773 KIF16BQ96L93 1317 aa19.09■□□□□ 0.65
ATP2A3-207ENST00000570773 FRAT1Q92837 279 aaPredicted RBP19.09■□□□□ 0.65
ATP2A3-207ENST00000570773 STK31Q9BXU1 1019 aa19.09■□□□□ 0.65
ATP2A3-207ENST00000570773 NOB1Q9ULX3 412 aaKnown RBP19.09■□□□□ 0.65
ATP2A3-207ENST00000570773 USP16Q9Y5T5 823 aa19.09■□□□□ 0.65
ATP2A3-207ENST00000570773 SLC4A2P04920 1241 aa19.08■□□□□ 0.64
ATP2A3-207ENST00000570773 RBM42Q9BTD8 480 aaKnown RBP19.08■□□□□ 0.64
ATP2A3-207ENST00000570773 BCL11BQ9C0K0 894 aaPredicted RBP19.08■□□□□ 0.64
ATP2A3-207ENST00000570773 UBR2Q8IWV8 1755 aa19.07■□□□□ 0.64
ATP2A3-207ENST00000570773 NEFLP07196 543 aa19.07■□□□□ 0.64
ATP2A3-207ENST00000570773 ZKSCAN2Q63HK3 967 aa19.07■□□□□ 0.64
ATP2A3-207ENST00000570773 SLC4A9Q96Q91 983 aa19.07■□□□□ 0.64
ATP2A3-207ENST00000570773 PALLDQ8WX93 1383 aa19.06■□□□□ 0.64
ATP2A3-207ENST00000570773 IPO8O15397 1037 aaKnown RBP19.06■□□□□ 0.64
ATP2A3-207ENST00000570773 CANXP27824 592 aaKnown RBP19.06■□□□□ 0.64
ATP2A3-207ENST00000570773 ARHGAP45Q92619 1136 aa19.06■□□□□ 0.64
ATP2A3-207ENST00000570773 TEX13AQ9BXU3 409 aaPredicted RBP19.06■□□□□ 0.64
ATP2A3-207ENST00000570773 CHPF2Q9P2E5 772 aa19.06■□□□□ 0.64
ATP2A3-207ENST00000570773 NHSQ6T4R5 1651 aa19.05■□□□□ 0.64
ATP2A3-207ENST00000570773 PDIA6Q15084 440 aa19.05■□□□□ 0.64
ATP2A3-207ENST00000570773 DBF4Q9UBU7 674 aaPredicted RBP19.05■□□□□ 0.64
ATP2A3-207ENST00000570773 BRWD3Q6RI45 1802 aa19.04■□□□□ 0.64
ATP2A3-207ENST00000570773 LOC102724428A0A0B4J2F2 783 aa19.04■□□□□ 0.64
ATP2A3-207ENST00000570773 SIK1P57059 783 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms