RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 USP48Q86UV5 1035 aa18.63■□□□□ 0.57
SMG6-207ENST00000570756 PRAM1Q96QH2 718 aa18.63■□□□□ 0.57
SMG6-207ENST00000570756 C3P01024 1663 aa18.63■□□□□ 0.57
SMG6-207ENST00000570756 ADAMTSL3P82987 1691 aa18.63■□□□□ 0.57
SMG6-207ENST00000570756 KIF20AO95235 890 aa18.62■□□□□ 0.57
SMG6-207ENST00000570756 IDI1Q13907 227 aa18.62■□□□□ 0.57
SMG6-207ENST00000570756 TMEM87AQ8NBN3 555 aa18.62■□□□□ 0.57
SMG6-207ENST00000570756 ESYT1Q9BSJ8 1104 aa18.62■□□□□ 0.57
SMG6-207ENST00000570756 RGS12O14924 1447 aa18.62■□□□□ 0.57
SMG6-207ENST00000570756 SSH2Q76I76 1423 aa18.62■□□□□ 0.57
SMG6-207ENST00000570756 PPP4R3BQ5MIZ7 849 aa18.62■□□□□ 0.57
SMG6-207ENST00000570756 ZNF830Q96NB3 372 aaPredicted RBP18.62■□□□□ 0.57
SMG6-207ENST00000570756 DIAPH3Q9NSV4 1193 aa18.62■□□□□ 0.57
SMG6-207ENST00000570756 CABP1Q9NZU7 370 aa18.62■□□□□ 0.57
SMG6-207ENST00000570756 ZBTB7CA1YPR0 619 aa18.61■□□□□ 0.57
SMG6-207ENST00000570756 GADD45BO75293 160 aaPredicted RBP18.61■□□□□ 0.57
SMG6-207ENST00000570756 TPM3P06753 285 aa18.61■□□□□ 0.57
SMG6-207ENST00000570756 IL13P35225 146 aa18.61■□□□□ 0.57
SMG6-207ENST00000570756 TTC12Q9H892 705 aaPredicted RBP18.61■□□□□ 0.57
SMG6-207ENST00000570756 CDK12Q9NYV4 1490 aaPredicted RBP18.61■□□□□ 0.57
SMG6-207ENST00000570756 CBX1P83916 185 aa18.6■□□□□ 0.57
SMG6-207ENST00000570756 CDK19Q9BWU1 502 aa18.6■□□□□ 0.57
SMG6-207ENST00000570756 MX1P20591 662 aa18.6■□□□□ 0.57
SMG6-207ENST00000570756 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.6■□□□□ 0.57
SMG6-207ENST00000570756 TSC1Q92574 1164 aa18.59■□□□□ 0.57
SMG6-207ENST00000570756 IL17RAQ96F46 866 aa18.59■□□□□ 0.57
SMG6-207ENST00000570756 MEIS3Q99687 375 aa18.59■□□□□ 0.57
SMG6-207ENST00000570756 GDPD2Q9HCC8 539 aa18.59■□□□□ 0.57
SMG6-207ENST00000570756 ATP7BP35670 1465 aa18.59■□□□□ 0.57
SMG6-207ENST00000570756 KDM4FA0A1W2PPD8 638 aa18.59■□□□□ 0.57
SMG6-207ENST00000570756 KDM4AO75164 1064 aa18.58■□□□□ 0.57
SMG6-207ENST00000570756 PDCL2Q8N4E4 241 aa18.58■□□□□ 0.57
SMG6-207ENST00000570756 JARID2Q92833 1246 aaPredicted RBP18.58■□□□□ 0.57
SMG6-207ENST00000570756 BCL2L12Q9HB09 334 aa18.58■□□□□ 0.57
SMG6-207ENST00000570756 NOL8Q76FK4 1167 aaKnown RBP18.58■□□□□ 0.56
SMG6-207ENST00000570756 MPNDQ8N594 471 aa18.58■□□□□ 0.56
SMG6-207ENST00000570756 ANO2Q9NQ90 1003 aa18.58■□□□□ 0.56
SMG6-207ENST00000570756 HCLS1P14317 486 aaPredicted RBP18.57■□□□□ 0.56
SMG6-207ENST00000570756 FOXD4L6Q3SYB3 417 aaPredicted RBP18.57■□□□□ 0.56
SMG6-207ENST00000570756 FOXD4L3Q6VB84 417 aaPredicted RBP18.57■□□□□ 0.56
SMG6-207ENST00000570756 PALD1Q9ULE6 856 aa18.57■□□□□ 0.56
SMG6-207ENST00000570756 FAM83GA6ND36 823 aa18.57■□□□□ 0.56
SMG6-207ENST00000570756 UBE2HP62256 183 aa18.57■□□□□ 0.56
SMG6-207ENST00000570756 KIAA0232Q92628 1395 aa18.56■□□□□ 0.56
SMG6-207ENST00000570756 EPB41L2O43491 1005 aaKnown RBP18.56■□□□□ 0.56
SMG6-207ENST00000570756 FBLN1P23142 703 aa18.56■□□□□ 0.56
SMG6-207ENST00000570756 EMILIN1Q9Y6C2 1016 aa18.56■□□□□ 0.56
SMG6-207ENST00000570756 MYO5BQ9ULV0 1848 aa18.56■□□□□ 0.56
SMG6-207ENST00000570756 GOLGA6L6A8MZA4 724 aa18.55■□□□□ 0.56
SMG6-207ENST00000570756 ATP2B3Q16720 1220 aa18.55■□□□□ 0.56
SMG6-207ENST00000570756 C17orf53Q8N3J3 647 aaPredicted RBP18.55■□□□□ 0.56
SMG6-207ENST00000570756 TCHHQ07283 1943 aa18.55■□□□□ 0.56
SMG6-207ENST00000570756 RPAP1Q9BWH6 1393 aaPredicted RBP18.55■□□□□ 0.56
SMG6-207ENST00000570756 SRCIN1Q9C0H9 1055 aa18.55■□□□□ 0.56
SMG6-207ENST00000570756 SPATA31D1Q6ZQQ2 1576 aa18.55■□□□□ 0.56
SMG6-207ENST00000570756 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.54■□□□□ 0.56
SMG6-207ENST00000570756 KIAA1524Q8TCG1 905 aa18.54■□□□□ 0.56
SMG6-207ENST00000570756 ATP6V1DQ9Y5K8 247 aa18.54■□□□□ 0.56
SMG6-207ENST00000570756 AATKQ6ZMQ8 1374 aa18.54■□□□□ 0.56
SMG6-207ENST00000570756 TNRQ92752 1358 aa18.54■□□□□ 0.56
SMG6-207ENST00000570756 CHMLP26374 656 aa18.54■□□□□ 0.56
SMG6-207ENST00000570756 TUBGCP6Q96RT7 1819 aa18.54■□□□□ 0.56
SMG6-207ENST00000570756 DCTN1Q14203 1278 aa18.53■□□□□ 0.56
SMG6-207ENST00000570756 SLC52A1Q9NWF4 448 aa18.53■□□□□ 0.56
SMG6-207ENST00000570756 PLEKHG5O94827 1062 aa18.52■□□□□ 0.56
SMG6-207ENST00000570756 CCT4P50991 539 aaKnown RBP18.52■□□□□ 0.56
SMG6-207ENST00000570756 KRT24Q2M2I5 525 aa18.52■□□□□ 0.56
SMG6-207ENST00000570756 ANKRD7Q92527 254 aa18.52■□□□□ 0.56
SMG6-207ENST00000570756 UPF3BQ9BZI7 483 aaKnown RBP18.52■□□□□ 0.56
SMG6-207ENST00000570756 LRRCC1Q9C099 1032 aa18.52■□□□□ 0.56
SMG6-207ENST00000570756 STAG3Q9UJ98 1225 aa18.52■□□□□ 0.56
SMG6-207ENST00000570756 SALL3Q9BXA9 1300 aa18.52■□□□□ 0.56
SMG6-207ENST00000570756 TRIM6-TRIM34B2RNG4 842 aa18.52■□□□□ 0.55
SMG6-207ENST00000570756 ZSCAN22P10073 491 aaPredicted RBP18.52■□□□□ 0.55
SMG6-207ENST00000570756 CNPY2Q9Y2B0 182 aa18.52■□□□□ 0.55
SMG6-207ENST00000570756 CHL1O00533 1208 aa18.51■□□□□ 0.55
SMG6-207ENST00000570756 RILPL2Q969X0 211 aa18.51■□□□□ 0.55
SMG6-207ENST00000570756 FEZ1Q99689 392 aa18.51■□□□□ 0.55
SMG6-207ENST00000570756 RIOK3O14730 519 aaKnown RBP18.51■□□□□ 0.55
SMG6-207ENST00000570756 PLCB2Q00722 1185 aa18.51■□□□□ 0.55
SMG6-207ENST00000570756 EDC4Q6P2E9 1401 aaKnown RBP18.51■□□□□ 0.55
SMG6-207ENST00000570756 FAM177BA6PVY3 158 aa18.5■□□□□ 0.55
SMG6-207ENST00000570756 CTIFO43310 598 aaKnown RBP18.5■□□□□ 0.55
SMG6-207ENST00000570756 GNAI2P04899 355 aa18.5■□□□□ 0.55
SMG6-207ENST00000570756 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.5■□□□□ 0.55
SMG6-207ENST00000570756 FUCA2Q9BTY2 467 aa18.49■□□□□ 0.55
SMG6-207ENST00000570756 EXOC6BQ9Y2D4 811 aa18.49■□□□□ 0.55
SMG6-207ENST00000570756 SLC4A2P04920 1241 aa18.49■□□□□ 0.55
SMG6-207ENST00000570756 HSPA4P34932 840 aa18.49■□□□□ 0.55
SMG6-207ENST00000570756 STX6O43752 255 aa18.48■□□□□ 0.55
SMG6-207ENST00000570756 TAF3Q5VWG9 929 aa18.48■□□□□ 0.55
SMG6-207ENST00000570756 TSHZ3Q63HK5 1081 aa18.48■□□□□ 0.55
SMG6-207ENST00000570756 KCNF1Q9H3M0 494 aa18.48■□□□□ 0.55
SMG6-207ENST00000570756 STAP2Q9UGK3 403 aa18.48■□□□□ 0.55
SMG6-207ENST00000570756 AOX1Q06278 1338 aa18.47■□□□□ 0.55
SMG6-207ENST00000570756 A0A0U1RQG5 324 aaPredicted RBP18.47■□□□□ 0.55
SMG6-207ENST00000570756 SPDYE4A6NLX3 237 aa18.47■□□□□ 0.55
SMG6-207ENST00000570756 PYCARDQ9ULZ3 195 aa18.47■□□□□ 0.55
SMG6-207ENST00000570756 TMEM131LA2VDJ0 1609 aa18.47■□□□□ 0.55
SMG6-207ENST00000570756 F13A1P00488 732 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms