RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 CLEC11AQ9Y240 323 aa12.01□□□□□ -0.49
SNX29-208ENST00000569801 UNC80Q8N2C7 3258 aa12.01□□□□□ -0.49
SNX29-208ENST00000569801 RBM27Q9P2N5 1060 aaKnown RBP12□□□□□ -0.49
SNX29-208ENST00000569801 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.99□□□□□ -0.49
SNX29-208ENST00000569801 PRIM1P49642 420 aaKnown RBP11.99□□□□□ -0.49
SNX29-208ENST00000569801 EAPPQ56P03 285 aaPredicted RBP11.99□□□□□ -0.49
SNX29-208ENST00000569801 TAF1DQ9H5J8 278 aaPredicted RBP11.99□□□□□ -0.49
SNX29-208ENST00000569801 AXIN2Q9Y2T1 843 aa11.99□□□□□ -0.49
SNX29-208ENST00000569801 QRICH2Q9H0J4 1663 aa11.98□□□□□ -0.49
SNX29-208ENST00000569801 H0YGN5 161 aa11.98□□□□□ -0.49
SNX29-208ENST00000569801 PPEF1O14829 653 aaPredicted RBP11.98□□□□□ -0.49
SNX29-208ENST00000569801 DDNO94850 711 aaPredicted RBP11.98□□□□□ -0.49
SNX29-208ENST00000569801 CSB-PGBD3P0DP91 1061 aa11.98□□□□□ -0.49
SNX29-208ENST00000569801 MAP1SQ66K74 1059 aaPredicted RBP11.98□□□□□ -0.49
SNX29-208ENST00000569801 DDX21Q9NR30 783 aaKnown RBP eCLIP11.98□□□□□ -0.49
SNX29-208ENST00000569801 ABTB2Q8N961 1025 aa11.97□□□□□ -0.49
SNX29-208ENST00000569801 CCDC87Q9NVE4 849 aa11.97□□□□□ -0.49
SNX29-208ENST00000569801 MKI67P46013 3256 aaKnown RBP11.97□□□□□ -0.49
SNX29-208ENST00000569801 EIF3AQ14152 1382 aaKnown RBP11.96□□□□□ -0.49
SNX29-208ENST00000569801 IQCA1LA6NCM1 817 aa11.96□□□□□ -0.49
SNX29-208ENST00000569801 WASLO00401 505 aaPredicted RBP11.96□□□□□ -0.49
SNX29-208ENST00000569801 STXBP5LQ9Y2K9 1186 aa11.96□□□□□ -0.49
SNX29-208ENST00000569801 ITSN1Q15811 1721 aa11.96□□□□□ -0.49
SNX29-208ENST00000569801 AK7Q96M32 723 aa11.95□□□□□ -0.5
SNX29-208ENST00000569801 PPIP5K1Q6PFW1 1433 aa11.94□□□□□ -0.5
SNX29-208ENST00000569801 SBF1O95248 1867 aa11.94□□□□□ -0.5
SNX29-208ENST00000569801 FMR1Q06787 632 aaKnown RBP eCLIP11.94□□□□□ -0.5
SNX29-208ENST00000569801 PKN2Q16513 984 aaKnown RBP11.94□□□□□ -0.5
SNX29-208ENST00000569801 TLL2Q9Y6L7 1015 aa11.94□□□□□ -0.5
SNX29-208ENST00000569801 ABCC6O95255 1503 aa11.94□□□□□ -0.5
SNX29-208ENST00000569801 SYNGAP1Q96PV0 1343 aa11.93□□□□□ -0.5
SNX29-208ENST00000569801 POTEFA5A3E0 1075 aa11.93□□□□□ -0.5
SNX29-208ENST00000569801 NBPF1Q3BBV0 1214 aa11.93□□□□□ -0.5
SNX29-208ENST00000569801 VCANP13611 3396 aa11.92□□□□□ -0.5
SNX29-208ENST00000569801 CHRNA5P30532 468 aa11.92□□□□□ -0.5
SNX29-208ENST00000569801 LRCH3Q96II8 777 aa11.92□□□□□ -0.5
SNX29-208ENST00000569801 ARFGEF1Q9Y6D6 1849 aa11.92□□□□□ -0.5
SNX29-208ENST00000569801 PKD1L2Q7Z442 2459 aa11.92□□□□□ -0.5
SNX29-208ENST00000569801 CCDC7Q96M83 1385 aa11.92□□□□□ -0.5
SNX29-208ENST00000569801 USP54Q70EL1 1684 aa11.91□□□□□ -0.5
SNX29-208ENST00000569801 WNK3Q9BYP7 1800 aa11.91□□□□□ -0.5
SNX29-208ENST00000569801 TMEM265A0A087WTH1 108 aa11.91□□□□□ -0.5
SNX29-208ENST00000569801 SOX1O00570 391 aaPredicted RBP11.91□□□□□ -0.5
SNX29-208ENST00000569801 ERFEQ4G0M1 354 aa11.91□□□□□ -0.5
SNX29-208ENST00000569801 CST9Q5W186 159 aa11.91□□□□□ -0.5
SNX29-208ENST00000569801 NLRP13Q86W25 1043 aa11.91□□□□□ -0.5
SNX29-208ENST00000569801 ZIC5Q96T25 663 aa11.91□□□□□ -0.5
SNX29-208ENST00000569801 NSD2O96028 1365 aa11.91□□□□□ -0.5
SNX29-208ENST00000569801 KIF13BQ9NQT8 1826 aa11.9□□□□□ -0.5
SNX29-208ENST00000569801 SPTBN5Q9NRC6 3674 aaKnown RBP11.9□□□□□ -0.5
SNX29-208ENST00000569801 HMGB2P26583 209 aaKnown RBP11.9□□□□□ -0.5
SNX29-208ENST00000569801 MAP3K12Q12852 859 aa11.9□□□□□ -0.5
SNX29-208ENST00000569801 AKAP4Q5JQC9 854 aa11.9□□□□□ -0.5
SNX29-208ENST00000569801 ANKRD13DQ6ZTN6 518 aa11.9□□□□□ -0.5
SNX29-208ENST00000569801 DDX54Q8TDD1 881 aaKnown RBP11.9□□□□□ -0.5
SNX29-208ENST00000569801 NUDT16Q96DE0 195 aaKnown RBP11.9□□□□□ -0.5
SNX29-208ENST00000569801 CDK19Q9BWU1 502 aa11.9□□□□□ -0.5
SNX29-208ENST00000569801 CEP290O15078 2479 aa11.89□□□□□ -0.51
SNX29-208ENST00000569801 SSFA2P28290 1259 aa11.89□□□□□ -0.51
SNX29-208ENST00000569801 L3MBTL2Q969R5 705 aa11.89□□□□□ -0.51
SNX29-208ENST00000569801 COL26A1Q96A83 441 aa11.89□□□□□ -0.51
SNX29-208ENST00000569801 SIN3AQ96ST3 1273 aa11.89□□□□□ -0.51
SNX29-208ENST00000569801 TTC28Q96AY4 2481 aa11.89□□□□□ -0.51
SNX29-208ENST00000569801 USP47Q96K76 1375 aa11.89□□□□□ -0.51
SNX29-208ENST00000569801 PIEZO1Q92508 2521 aa11.89□□□□□ -0.51
SNX29-208ENST00000569801 NFKBIEO00221 500 aa11.88□□□□□ -0.51
SNX29-208ENST00000569801 IL2RBP14784 551 aa11.88□□□□□ -0.51
SNX29-208ENST00000569801 SAGE1Q9NXZ1 904 aa11.88□□□□□ -0.51
SNX29-208ENST00000569801 ANKRD36BQ8N2N9 1353 aa11.88□□□□□ -0.51
SNX29-208ENST00000569801 RANBP2P49792 3224 aaKnown RBP11.88□□□□□ -0.51
SNX29-208ENST00000569801 DEFB123Q8N688 67 aa11.87□□□□□ -0.51
SNX29-208ENST00000569801 CACNA1GO43497 2377 aa11.87□□□□□ -0.51
SNX29-208ENST00000569801 POLR3AO14802 1390 aaPredicted RBP11.87□□□□□ -0.51
SNX29-208ENST00000569801 BRCA1P38398 1863 aaKnown RBP11.87□□□□□ -0.51
SNX29-208ENST00000569801 KAT6BQ8WYB5 2073 aa11.87□□□□□ -0.51
SNX29-208ENST00000569801 CENPJQ9HC77 1338 aaPredicted RBP11.86□□□□□ -0.51
SNX29-208ENST00000569801 TRPA1O75762 1119 aa11.86□□□□□ -0.51
SNX29-208ENST00000569801 SAPCD2Q86UD0 394 aa11.86□□□□□ -0.51
SNX29-208ENST00000569801 L3MBTL3Q96JM7 780 aaPredicted RBP11.86□□□□□ -0.51
SNX29-208ENST00000569801 PARP3Q9Y6F1 533 aa11.86□□□□□ -0.51
SNX29-208ENST00000569801 LY75O60449 1722 aa11.86□□□□□ -0.51
SNX29-208ENST00000569801 TMF1P82094 1093 aa11.85□□□□□ -0.51
SNX29-208ENST00000569801 NLGN1Q8N2Q7 840 aa11.85□□□□□ -0.51
SNX29-208ENST00000569801 CCDC61Q9Y6R9 512 aa11.85□□□□□ -0.51
SNX29-208ENST00000569801 NSD3Q9BZ95 1437 aa11.85□□□□□ -0.51
SNX29-208ENST00000569801 ACEP12821 1306 aa11.85□□□□□ -0.51
SNX29-208ENST00000569801 PLEKHG3A1L390 1219 aa11.84□□□□□ -0.51
SNX29-208ENST00000569801 EPHX2P34913 555 aa11.84□□□□□ -0.51
SNX29-208ENST00000569801 NOGQ13253 232 aa11.84□□□□□ -0.51
SNX29-208ENST00000569801 NEUROD1Q13562 356 aa11.84□□□□□ -0.51
SNX29-208ENST00000569801 RNF186Q9NXI6 227 aa11.84□□□□□ -0.51
SNX29-208ENST00000569801 EN2P19622 333 aaPredicted RBP11.83□□□□□ -0.52
SNX29-208ENST00000569801 FBXO46Q6PJ61 603 aaPredicted RBP11.83□□□□□ -0.52
SNX29-208ENST00000569801 Q7L0L9 218 aa11.83□□□□□ -0.52
SNX29-208ENST00000569801 PNMA8AQ86V59 439 aaPredicted RBP11.83□□□□□ -0.52
SNX29-208ENST00000569801 ALYREFQ86V81 257 aaKnown RBP11.83□□□□□ -0.52
SNX29-208ENST00000569801 PIAS4Q8N2W9 510 aaPredicted RBP11.83□□□□□ -0.52
SNX29-208ENST00000569801 CABP2Q9NPB3 220 aa11.83□□□□□ -0.52
SNX29-208ENST00000569801 HACL1Q9UJ83 578 aa11.83□□□□□ -0.52
SNX29-208ENST00000569801 HDAC9Q9UKV0 1011 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 299 ms