RNA–Protein interactions for RNA: ENST00000569745.5

CCNDBP1-215, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 5

Gene CCNDBP1, Length 1,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-215ENST00000569745 NUDCQ9Y266 331 aa22■■□□□ 1.11
CCNDBP1-215ENST00000569745 ITPK1Q13572 414 aa21.99■■□□□ 1.11
CCNDBP1-215ENST00000569745 LINC00116Q8NCU8 138 aa21.99■■□□□ 1.11
CCNDBP1-215ENST00000569745 LGR6Q9HBX8 967 aa21.99■■□□□ 1.11
CCNDBP1-215ENST00000569745 POLD1P28340 1107 aa21.99■■□□□ 1.11
CCNDBP1-215ENST00000569745 RNMTO43148 476 aaKnown RBP21.97■■□□□ 1.11
CCNDBP1-215ENST00000569745 SYT17Q9BSW7 474 aa21.97■■□□□ 1.11
CCNDBP1-215ENST00000569745 FHDC1Q9C0D6 1143 aaPredicted RBP21.97■■□□□ 1.11
CCNDBP1-215ENST00000569745 SLC52A2Q9HAB3 445 aa21.97■■□□□ 1.11
CCNDBP1-215ENST00000569745 QSER1Q2KHR3 1735 aa21.96■■□□□ 1.11
CCNDBP1-215ENST00000569745 C5P01031 1676 aa21.96■■□□□ 1.11
CCNDBP1-215ENST00000569745 SLC4A9Q96Q91 983 aa21.96■■□□□ 1.11
CCNDBP1-215ENST00000569745 DCAF8L1A6NGE4 600 aa21.95■■□□□ 1.1
CCNDBP1-215ENST00000569745 GAS2L2Q8NHY3 880 aa21.95■■□□□ 1.1
CCNDBP1-215ENST00000569745 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.94■■□□□ 1.1
CCNDBP1-215ENST00000569745 PTCD1O75127 700 aaKnown RBP21.94■■□□□ 1.1
CCNDBP1-215ENST00000569745 PHF14O94880 888 aa21.94■■□□□ 1.1
CCNDBP1-215ENST00000569745 U2AF1L5P0DN76 240 aaPredicted RBP21.94■■□□□ 1.1
CCNDBP1-215ENST00000569745 SSFA2P28290 1259 aa21.94■■□□□ 1.1
CCNDBP1-215ENST00000569745 U2AF1Q01081 240 aaKnown RBP eCLIP21.94■■□□□ 1.1
CCNDBP1-215ENST00000569745 DDX10Q13206 875 aaKnown RBP21.94■■□□□ 1.1
CCNDBP1-215ENST00000569745 PRKAR2BP31323 418 aa21.93■■□□□ 1.1
CCNDBP1-215ENST00000569745 AMIGO3Q86WK7 504 aa21.93■■□□□ 1.1
CCNDBP1-215ENST00000569745 RSPH6AQ9H0K4 717 aa21.93■■□□□ 1.1
CCNDBP1-215ENST00000569745 C4BP0C0L5 1744 aa21.93■■□□□ 1.1
CCNDBP1-215ENST00000569745 GNPATO15228 680 aa21.92■■□□□ 1.1
CCNDBP1-215ENST00000569745 FCHSD2O94868 740 aa21.92■■□□□ 1.1
CCNDBP1-215ENST00000569745 SMIM5Q71RC9 77 aa21.92■■□□□ 1.1
CCNDBP1-215ENST00000569745 PHACTR3Q96KR7 559 aa21.92■■□□□ 1.1
CCNDBP1-215ENST00000569745 GNAT3A8MTJ3 354 aa21.91■■□□□ 1.1
CCNDBP1-215ENST00000569745 RC3H1Q5TC82 1133 aaKnown RBP21.91■■□□□ 1.1
CCNDBP1-215ENST00000569745 TAF1LQ8IZX4 1826 aa21.9■■□□□ 1.1
CCNDBP1-215ENST00000569745 MSL1Q68DK7 614 aa21.9■■□□□ 1.1
CCNDBP1-215ENST00000569745 ZEB1P37275 1124 aaPredicted RBP21.89■■□□□ 1.1
CCNDBP1-215ENST00000569745 RTCBQ9Y3I0 505 aaKnown RBP21.89■■□□□ 1.1
CCNDBP1-215ENST00000569745 TUBGCP6Q96RT7 1819 aa21.89■■□□□ 1.09
CCNDBP1-215ENST00000569745 RALBP1Q15311 655 aa21.88■■□□□ 1.09
CCNDBP1-215ENST00000569745 TRAPPC3LQ5T215 181 aa21.88■■□□□ 1.09
CCNDBP1-215ENST00000569745 IL17REQ8NFR9 667 aa21.88■■□□□ 1.09
CCNDBP1-215ENST00000569745 MAP3K5Q99683 1374 aa21.88■■□□□ 1.09
CCNDBP1-215ENST00000569745 CNTNAP4Q9C0A0 1308 aa21.88■■□□□ 1.09
CCNDBP1-215ENST00000569745 SLC39A6Q13433 755 aa21.87■■□□□ 1.09
CCNDBP1-215ENST00000569745 RPS6KA4O75676 772 aa21.87■■□□□ 1.09
CCNDBP1-215ENST00000569745 TEFQ10587 303 aa21.87■■□□□ 1.09
CCNDBP1-215ENST00000569745 KLHL34Q8N239 644 aa21.87■■□□□ 1.09
CCNDBP1-215ENST00000569745 SCN11AQ9UI33 1791 aa21.85■■□□□ 1.09
CCNDBP1-215ENST00000569745 MRC1P22897 1456 aa21.85■■□□□ 1.09
CCNDBP1-215ENST00000569745 ADRA2BP18089 450 aa21.85■■□□□ 1.09
CCNDBP1-215ENST00000569745 ZNF831Q5JPB2 1677 aa21.85■■□□□ 1.09
CCNDBP1-215ENST00000569745 CRKLP46109 303 aaKnown RBP21.84■■□□□ 1.09
CCNDBP1-215ENST00000569745 ARHGEF1Q92888 912 aaKnown RBP21.84■■□□□ 1.09
CCNDBP1-215ENST00000569745 COL24A1Q17RW2 1714 aa21.84■■□□□ 1.09
CCNDBP1-215ENST00000569745 DNAJC10Q8IXB1 793 aa21.82■■□□□ 1.08
CCNDBP1-215ENST00000569745 TTC5Q8N0Z6 440 aa21.82■■□□□ 1.08
CCNDBP1-215ENST00000569745 VSIG10Q8N0Z9 540 aa21.82■■□□□ 1.08
CCNDBP1-215ENST00000569745 RTF1Q92541 710 aaKnown RBP21.82■■□□□ 1.08
CCNDBP1-215ENST00000569745 ADAMTS7Q9UKP4 1686 aa21.82■■□□□ 1.08
CCNDBP1-215ENST00000569745 UBR3Q6ZT12 1888 aa21.81■■□□□ 1.08
CCNDBP1-215ENST00000569745 NEFMP07197 916 aa21.81■■□□□ 1.08
CCNDBP1-215ENST00000569745 RFC4P35249 363 aa21.81■■□□□ 1.08
CCNDBP1-215ENST00000569745 CEMIPQ8WUJ3 1361 aa21.81■■□□□ 1.08
CCNDBP1-215ENST00000569745 INTS5Q6P9B9 1019 aaKnown RBP21.8■■□□□ 1.08
CCNDBP1-215ENST00000569745 NLGN1Q8N2Q7 840 aa21.8■■□□□ 1.08
CCNDBP1-215ENST00000569745 HTATSF1O43719 755 aaKnown RBP21.79■■□□□ 1.08
CCNDBP1-215ENST00000569745 ZNF790Q6PG37 636 aa21.79■■□□□ 1.08
CCNDBP1-215ENST00000569745 PNNQ9H307 717 aaKnown RBP21.79■■□□□ 1.08
CCNDBP1-215ENST00000569745 CD2APQ9Y5K6 639 aa21.79■■□□□ 1.08
CCNDBP1-215ENST00000569745 CYP19A1P11511 503 aaPredicted RBP21.78■■□□□ 1.08
CCNDBP1-215ENST00000569745 YY1P25490 414 aa21.78■■□□□ 1.08
CCNDBP1-215ENST00000569745 NLGN2Q8NFZ4 835 aa21.78■■□□□ 1.08
CCNDBP1-215ENST00000569745 CCDC87Q9NVE4 849 aa21.78■■□□□ 1.08
CCNDBP1-215ENST00000569745 PLEKHF1Q96S99 279 aa21.77■■□□□ 1.08
CCNDBP1-215ENST00000569745 BTBD11A6QL63 1104 aa21.76■■□□□ 1.07
CCNDBP1-215ENST00000569745 GPR162Q16538 588 aa21.76■■□□□ 1.07
CCNDBP1-215ENST00000569745 MCM10Q7L590 875 aa21.76■■□□□ 1.07
CCNDBP1-215ENST00000569745 ZNF496Q96IT1 587 aaPredicted RBP21.76■■□□□ 1.07
CCNDBP1-215ENST00000569745 MYBBP1AQ9BQG0 1328 aaKnown RBP21.76■■□□□ 1.07
CCNDBP1-215ENST00000569745 GYS1P13807 737 aa21.75■■□□□ 1.07
CCNDBP1-215ENST00000569745 COL5A3P25940 1745 aaPredicted RBP21.75■■□□□ 1.07
CCNDBP1-215ENST00000569745 KCPQ6ZWJ8 1503 aa21.75■■□□□ 1.07
CCNDBP1-215ENST00000569745 MMP10P09238 476 aa21.74■■□□□ 1.07
CCNDBP1-215ENST00000569745 TEX13AQ9BXU3 409 aaPredicted RBP21.74■■□□□ 1.07
CCNDBP1-215ENST00000569745 STARD3NLO95772 234 aa21.74■■□□□ 1.07
CCNDBP1-215ENST00000569745 DCTN1Q14203 1278 aa21.74■■□□□ 1.07
CCNDBP1-215ENST00000569745 FMNL2Q96PY5 1086 aa21.74■■□□□ 1.07
CCNDBP1-215ENST00000569745 HEG1Q9ULI3 1381 aa21.73■■□□□ 1.07
CCNDBP1-215ENST00000569745 CICQ96RK0 1608 aaPredicted RBP21.72■■□□□ 1.07
CCNDBP1-215ENST00000569745 TJP1Q07157 1748 aa21.72■■□□□ 1.07
CCNDBP1-215ENST00000569745 PELP1Q8IZL8 1130 aaKnown RBP21.72■■□□□ 1.07
CCNDBP1-215ENST00000569745 ZBTB1Q9Y2K1 713 aa21.72■■□□□ 1.07
CCNDBP1-215ENST00000569745 SOS1Q07889 1333 aaPredicted RBP21.71■■□□□ 1.07
CCNDBP1-215ENST00000569745 USP42Q9H9J4 1324 aaKnown RBP21.71■■□□□ 1.07
CCNDBP1-215ENST00000569745 KCNQ3O43525 872 aa21.71■■□□□ 1.07
CCNDBP1-215ENST00000569745 NFE2L2Q16236 605 aa21.71■■□□□ 1.07
CCNDBP1-215ENST00000569745 SRP68Q9UHB9 627 aaKnown RBP21.71■■□□□ 1.07
CCNDBP1-215ENST00000569745 MAPK8IP3Q9UPT6 1336 aa21.7■■□□□ 1.06
CCNDBP1-215ENST00000569745 ZPR1O75312 459 aa21.7■■□□□ 1.06
CCNDBP1-215ENST00000569745 CANXP27824 592 aaKnown RBP21.7■■□□□ 1.06
CCNDBP1-215ENST00000569745 TAF7Q15545 349 aaPredicted RBP21.7■■□□□ 1.06
CCNDBP1-215ENST00000569745 PRKRIP1Q9H875 184 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms