RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 NFATC2IPQ8NCF5 419 aa18.45■□□□□ 0.54
HERPUD1-218ENST00000569569 LOC102724428A0A0B4J2F2 783 aa18.44■□□□□ 0.54
HERPUD1-218ENST00000569569 RNMTO43148 476 aaKnown RBP18.44■□□□□ 0.54
HERPUD1-218ENST00000569569 SIK1P57059 783 aa18.44■□□□□ 0.54
HERPUD1-218ENST00000569569 PDGFDQ9GZP0 370 aaPredicted RBP18.44■□□□□ 0.54
HERPUD1-218ENST00000569569 LGR6Q9HBX8 967 aa18.44■□□□□ 0.54
HERPUD1-218ENST00000569569 MYBBP1AQ9BQG0 1328 aaKnown RBP18.44■□□□□ 0.54
HERPUD1-218ENST00000569569 ADAMTS7Q9UKP4 1686 aa18.44■□□□□ 0.54
HERPUD1-218ENST00000569569 PHACTR3Q96KR7 559 aa18.43■□□□□ 0.54
HERPUD1-218ENST00000569569 SPON1Q9HCB6 807 aa18.43■□□□□ 0.54
HERPUD1-218ENST00000569569 TFCP2L1Q9NZI6 479 aa18.43■□□□□ 0.54
HERPUD1-218ENST00000569569 SLC52A2Q9HAB3 445 aa18.42■□□□□ 0.54
HERPUD1-218ENST00000569569 ZNF831Q5JPB2 1677 aa18.41■□□□□ 0.54
HERPUD1-218ENST00000569569 GNAT3A8MTJ3 354 aa18.41■□□□□ 0.54
HERPUD1-218ENST00000569569 ATP6V1AP38606 617 aa18.41■□□□□ 0.54
HERPUD1-218ENST00000569569 C4BP0C0L5 1744 aa18.4■□□□□ 0.54
HERPUD1-218ENST00000569569 PRKRIP1Q9H875 184 aaPredicted RBP18.4■□□□□ 0.54
HERPUD1-218ENST00000569569 MAP3K5Q99683 1374 aa18.4■□□□□ 0.54
HERPUD1-218ENST00000569569 ZBTB7AO95365 584 aa18.39■□□□□ 0.53
HERPUD1-218ENST00000569569 RBM42Q9BTD8 480 aaKnown RBP18.39■□□□□ 0.53
HERPUD1-218ENST00000569569 PNPLA7Q6ZV29 1317 aa18.39■□□□□ 0.53
HERPUD1-218ENST00000569569 DLG5Q8TDM6 1919 aa18.39■□□□□ 0.53
HERPUD1-218ENST00000569569 MRC1P22897 1456 aa18.39■□□□□ 0.53
HERPUD1-218ENST00000569569 UBR3Q6ZT12 1888 aa18.38■□□□□ 0.53
HERPUD1-218ENST00000569569 NEFMP07197 916 aa18.38■□□□□ 0.53
HERPUD1-218ENST00000569569 SLC16A10Q8TF71 515 aa18.38■□□□□ 0.53
HERPUD1-218ENST00000569569 MTFR1LQ9H019 292 aa18.38■□□□□ 0.53
HERPUD1-218ENST00000569569 PNNQ9H307 717 aaKnown RBP18.38■□□□□ 0.53
HERPUD1-218ENST00000569569 ITPK1Q13572 414 aa18.37■□□□□ 0.53
HERPUD1-218ENST00000569569 IL17REQ8NFR9 667 aa18.37■□□□□ 0.53
HERPUD1-218ENST00000569569 SIPA1L3O60292 1781 aaPredicted RBP18.37■□□□□ 0.53
HERPUD1-218ENST00000569569 COL5A3P25940 1745 aaPredicted RBP18.36■□□□□ 0.53
HERPUD1-218ENST00000569569 LINC00116Q8NCU8 138 aa18.36■□□□□ 0.53
HERPUD1-218ENST00000569569 FLAD1Q8NFF5 587 aa18.36■□□□□ 0.53
HERPUD1-218ENST00000569569 AK7Q96M32 723 aa18.36■□□□□ 0.53
HERPUD1-218ENST00000569569 SLC4A9Q96Q91 983 aa18.36■□□□□ 0.53
HERPUD1-218ENST00000569569 ATF5Q9Y2D1 282 aaPredicted RBP18.36■□□□□ 0.53
HERPUD1-218ENST00000569569 PTCD1O75127 700 aaKnown RBP18.35■□□□□ 0.53
HERPUD1-218ENST00000569569 TEFQ10587 303 aa18.35■□□□□ 0.53
HERPUD1-218ENST00000569569 PLEKHF1Q96S99 279 aa18.35■□□□□ 0.53
HERPUD1-218ENST00000569569 MYH14Q7Z406 1995 aaKnown RBP18.35■□□□□ 0.53
HERPUD1-218ENST00000569569 COL23A1Q86Y22 540 aaPredicted RBP18.34■□□□□ 0.53
HERPUD1-218ENST00000569569 RTF1Q92541 710 aaKnown RBP18.34■□□□□ 0.53
HERPUD1-218ENST00000569569 PPP1R1BQ9UD71 204 aaPredicted RBP18.34■□□□□ 0.53
HERPUD1-218ENST00000569569 CEMIPQ8WUJ3 1361 aa18.33■□□□□ 0.53
HERPUD1-218ENST00000569569 COL24A1Q17RW2 1714 aa18.33■□□□□ 0.52
HERPUD1-218ENST00000569569 HTATSF1O43719 755 aaKnown RBP18.33■□□□□ 0.52
HERPUD1-218ENST00000569569 PTGER2P43116 358 aa18.33■□□□□ 0.52
HERPUD1-218ENST00000569569 SLC39A6Q13433 755 aa18.33■□□□□ 0.52
HERPUD1-218ENST00000569569 RC3H1Q5TC82 1133 aaKnown RBP18.32■□□□□ 0.52
HERPUD1-218ENST00000569569 UBR2Q8IWV8 1755 aa18.32■□□□□ 0.52
HERPUD1-218ENST00000569569 CICQ96RK0 1608 aaPredicted RBP18.31■□□□□ 0.52
HERPUD1-218ENST00000569569 MAPK8IP3Q9UPT6 1336 aa18.31■□□□□ 0.52
HERPUD1-218ENST00000569569 TJP1Q07157 1748 aa18.31■□□□□ 0.52
HERPUD1-218ENST00000569569 GNPATO15228 680 aa18.3■□□□□ 0.52
HERPUD1-218ENST00000569569 SSFA2P28290 1259 aa18.3■□□□□ 0.52
HERPUD1-218ENST00000569569 TTC5Q8N0Z6 440 aa18.3■□□□□ 0.52
HERPUD1-218ENST00000569569 SGIP1Q9BQI5 828 aa18.3■□□□□ 0.52
HERPUD1-218ENST00000569569 CNTNAP4Q9C0A0 1308 aa18.29■□□□□ 0.52
HERPUD1-218ENST00000569569 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.29■□□□□ 0.52
HERPUD1-218ENST00000569569 WDR43Q15061 677 aaKnown RBP eCLIP18.29■□□□□ 0.52
HERPUD1-218ENST00000569569 NFE2L2Q16236 605 aa18.29■□□□□ 0.52
HERPUD1-218ENST00000569569 MCM10Q7L590 875 aa18.29■□□□□ 0.52
HERPUD1-218ENST00000569569 KCPQ6ZWJ8 1503 aa18.28■□□□□ 0.52
HERPUD1-218ENST00000569569 PHF14O94880 888 aa18.28■□□□□ 0.52
HERPUD1-218ENST00000569569 ZNF790Q6PG37 636 aa18.28■□□□□ 0.52
HERPUD1-218ENST00000569569 AMIGO3Q86WK7 504 aa18.28■□□□□ 0.52
HERPUD1-218ENST00000569569 VSIG10Q8N0Z9 540 aa18.28■□□□□ 0.52
HERPUD1-218ENST00000569569 RTCBQ9Y3I0 505 aaKnown RBP18.28■□□□□ 0.52
HERPUD1-218ENST00000569569 BTBD11A6QL63 1104 aa18.27■□□□□ 0.52
HERPUD1-218ENST00000569569 POLD1P28340 1107 aa18.27■□□□□ 0.52
HERPUD1-218ENST00000569569 DCTN1Q14203 1278 aa18.27■□□□□ 0.52
HERPUD1-218ENST00000569569 RPS6KA4O75676 772 aa18.26■□□□□ 0.51
HERPUD1-218ENST00000569569 TRAPPC3LQ5T215 181 aa18.26■□□□□ 0.51
HERPUD1-218ENST00000569569 SMIM5Q71RC9 77 aa18.26■□□□□ 0.51
HERPUD1-218ENST00000569569 DNAJC10Q8IXB1 793 aa18.26■□□□□ 0.51
HERPUD1-218ENST00000569569 ARXQ96QS3 562 aa18.26■□□□□ 0.51
HERPUD1-218ENST00000569569 ANP32CO43423 234 aa18.25■□□□□ 0.51
HERPUD1-218ENST00000569569 CRKLP46109 303 aaKnown RBP18.25■□□□□ 0.51
HERPUD1-218ENST00000569569 ADAMTS8Q9UP79 889 aa18.25■□□□□ 0.51
HERPUD1-218ENST00000569569 TAF7Q15545 349 aaPredicted RBP18.24■□□□□ 0.51
HERPUD1-218ENST00000569569 ZNF496Q96IT1 587 aaPredicted RBP18.24■□□□□ 0.51
HERPUD1-218ENST00000569569 HEG1Q9ULI3 1381 aa18.23■□□□□ 0.51
HERPUD1-218ENST00000569569 CYP19A1P11511 503 aaPredicted RBP18.23■□□□□ 0.51
HERPUD1-218ENST00000569569 RIPK4P57078 832 aa18.23■□□□□ 0.51
HERPUD1-218ENST00000569569 RUNDC1Q96C34 613 aa18.23■□□□□ 0.51
HERPUD1-218ENST00000569569 FMNL2Q96PY5 1086 aa18.23■□□□□ 0.51
HERPUD1-218ENST00000569569 TEX13AQ9BXU3 409 aaPredicted RBP18.23■□□□□ 0.51
HERPUD1-218ENST00000569569 KCNQ3O43525 872 aa18.22■□□□□ 0.51
HERPUD1-218ENST00000569569 TMPOP42166 694 aaKnown RBP18.22■□□□□ 0.51
HERPUD1-218ENST00000569569 MSL1Q68DK7 614 aa18.22■□□□□ 0.51
HERPUD1-218ENST00000569569 INTS5Q6P9B9 1019 aaKnown RBP18.22■□□□□ 0.51
HERPUD1-218ENST00000569569 CCDC146Q8IYE0 955 aa18.22■□□□□ 0.51
HERPUD1-218ENST00000569569 ARHGEF1Q92888 912 aaKnown RBP18.22■□□□□ 0.51
HERPUD1-218ENST00000569569 CCDC87Q9NVE4 849 aa18.22■□□□□ 0.51
HERPUD1-218ENST00000569569 C4AP0C0L4 1744 aa18.21■□□□□ 0.51
HERPUD1-218ENST00000569569 STARD3NLO95772 234 aa18.21■□□□□ 0.51
HERPUD1-218ENST00000569569 RFC4P35249 363 aa18.21■□□□□ 0.51
HERPUD1-218ENST00000569569 FHDC1Q9C0D6 1143 aaPredicted RBP18.21■□□□□ 0.51
HERPUD1-218ENST00000569569 PNISRQ8TF01 805 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms