RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-218ENST00000569440 QRICH2Q9H0J4 1663 aa9.11□□□□□ -0.95
BBS4-218ENST00000569440 DALRD3Q5D0E6 543 aaKnown RBP9.11□□□□□ -0.95
BBS4-218ENST00000569440 NLGN1Q8N2Q7 840 aa9.11□□□□□ -0.95
BBS4-218ENST00000569440 CCDC87Q9NVE4 849 aa9.11□□□□□ -0.95
BBS4-218ENST00000569440 USP54Q70EL1 1684 aa9.1□□□□□ -0.95
BBS4-218ENST00000569440 AMER1Q5JTC6 1135 aaPredicted RBP9.1□□□□□ -0.95
BBS4-218ENST00000569440 CHADLQ6NUI6 762 aa9.1□□□□□ -0.95
BBS4-218ENST00000569440 LINC00116Q8NCU8 138 aa9.1□□□□□ -0.95
BBS4-218ENST00000569440 IP6K1Q92551 441 aa9.1□□□□□ -0.95
BBS4-218ENST00000569440 SMARCC1Q92922 1105 aaPredicted RBP9.1□□□□□ -0.95
BBS4-218ENST00000569440 KDM6AO15550 1401 aaPredicted RBP9.1□□□□□ -0.95
BBS4-218ENST00000569440 CENPJQ9HC77 1338 aaPredicted RBP9.09□□□□□ -0.95
BBS4-218ENST00000569440 KIAA1210Q9ULL0 1709 aa9.09□□□□□ -0.95
BBS4-218ENST00000569440 PITPNM1O00562 1244 aa9.09□□□□□ -0.95
BBS4-218ENST00000569440 TMF1P82094 1093 aa9.09□□□□□ -0.95
BBS4-218ENST00000569440 CLEC11AQ9Y240 323 aa9.09□□□□□ -0.95
BBS4-218ENST00000569440 KIAA1551Q9HCM1 1747 aa9.08□□□□□ -0.96
BBS4-218ENST00000569440 PASKQ96RG2 1323 aa9.08□□□□□ -0.96
BBS4-218ENST00000569440 LMNB1P20700 586 aa9.08□□□□□ -0.96
BBS4-218ENST00000569440 NBPF1Q3BBV0 1214 aa9.08□□□□□ -0.96
BBS4-218ENST00000569440 MPRIPQ6WCQ1 1025 aa9.08□□□□□ -0.96
BBS4-218ENST00000569440 SPDYE1Q8NFV5 336 aaPredicted RBP9.08□□□□□ -0.96
BBS4-218ENST00000569440 FBXO3Q9UK99 471 aa9.08□□□□□ -0.96
BBS4-218ENST00000569440 TNRC6CQ9HCJ0 1690 aaKnown RBP9.07□□□□□ -0.96
BBS4-218ENST00000569440 GNPATO15228 680 aa9.07□□□□□ -0.96
BBS4-218ENST00000569440 MAP2K1Q02750 393 aaPredicted RBP9.07□□□□□ -0.96
BBS4-218ENST00000569440 RGPD5Q99666 1765 aa9.07□□□□□ -0.96
BBS4-218ENST00000569440 CGNL1Q0VF96 1302 aa9.06□□□□□ -0.96
BBS4-218ENST00000569440 C4BP0C0L5 1744 aa9.06□□□□□ -0.96
BBS4-218ENST00000569440 TOGARAM1Q9Y4F4 1720 aa9.06□□□□□ -0.96
BBS4-218ENST00000569440 LOC102724428A0A0B4J2F2 783 aa9.06□□□□□ -0.96
BBS4-218ENST00000569440 POTEIP0CG38 1075 aa9.06□□□□□ -0.96
BBS4-218ENST00000569440 POTEJP0CG39 1038 aa9.06□□□□□ -0.96
BBS4-218ENST00000569440 GYS1P13807 737 aa9.06□□□□□ -0.96
BBS4-218ENST00000569440 SIK1P57059 783 aa9.06□□□□□ -0.96
BBS4-218ENST00000569440 RASSF7Q02833 373 aa9.06□□□□□ -0.96
BBS4-218ENST00000569440 ITPK1Q13572 414 aa9.06□□□□□ -0.96
BBS4-218ENST00000569440 NME9Q86XW9 330 aa9.06□□□□□ -0.96
BBS4-218ENST00000569440 PIGBQ92521 554 aa9.06□□□□□ -0.96
BBS4-218ENST00000569440 LTV1Q96GA3 475 aaPredicted RBP9.06□□□□□ -0.96
BBS4-218ENST00000569440 PARP3Q9Y6F1 533 aa9.06□□□□□ -0.96
BBS4-218ENST00000569440 C5P01031 1676 aa9.06□□□□□ -0.96
BBS4-218ENST00000569440 MEGF6O75095 1541 aa9.05□□□□□ -0.96
BBS4-218ENST00000569440 KTN1Q86UP2 1357 aaKnown RBP9.05□□□□□ -0.96
BBS4-218ENST00000569440 RASSF10A6NK89 507 aa9.05□□□□□ -0.96
BBS4-218ENST00000569440 TMEM88BA6NKF7 163 aa9.05□□□□□ -0.96
BBS4-218ENST00000569440 TRAPPC3LQ5T215 181 aa9.05□□□□□ -0.96
BBS4-218ENST00000569440 PRPF38BQ5VTL8 546 aaKnown RBP9.05□□□□□ -0.96
BBS4-218ENST00000569440 CHRDL2Q6WN34 429 aa9.05□□□□□ -0.96
BBS4-218ENST00000569440 EVC2Q86UK5 1308 aa9.05□□□□□ -0.96
BBS4-218ENST00000569440 KIF13BQ9NQT8 1826 aa9.04□□□□□ -0.96
BBS4-218ENST00000569440 ITGBL1O95965 494 aaPredicted RBP9.04□□□□□ -0.96
BBS4-218ENST00000569440 CHRNA5P30532 468 aa9.04□□□□□ -0.96
BBS4-218ENST00000569440 DPY19L2Q6NUT2 758 aa9.04□□□□□ -0.96
BBS4-218ENST00000569440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.04□□□□□ -0.96
BBS4-218ENST00000569440 ARHGEF1Q92888 912 aaKnown RBP9.04□□□□□ -0.96
BBS4-218ENST00000569440 DOT1LQ8TEK3 1739 aa9.04□□□□□ -0.96
BBS4-218ENST00000569440 PKD1L3Q7Z443 1732 aa9.03□□□□□ -0.96
BBS4-218ENST00000569440 DEFB115Q30KQ5 88 aa9.03□□□□□ -0.96
BBS4-218ENST00000569440 CFAP44Q96MT7 982 aa9.03□□□□□ -0.96
BBS4-218ENST00000569440 MCOLN1Q9GZU1 580 aa9.03□□□□□ -0.96
BBS4-218ENST00000569440 RTCBQ9Y3I0 505 aaKnown RBP9.03□□□□□ -0.96
BBS4-218ENST00000569440 WDR33Q9C0J8 1336 aaKnown RBP9.03□□□□□ -0.96
BBS4-218ENST00000569440 SBNO2Q9Y2G9 1366 aa9.02□□□□□ -0.97
BBS4-218ENST00000569440 CYP27B1O15528 508 aa9.02□□□□□ -0.97
BBS4-218ENST00000569440 HOXC9P31274 260 aa9.02□□□□□ -0.97
BBS4-218ENST00000569440 NBPF6Q5VWK0 638 aa9.02□□□□□ -0.97
BBS4-218ENST00000569440 NBPF4Q96M43 638 aa9.02□□□□□ -0.97
BBS4-218ENST00000569440 PCDH11XQ9BZA7 1347 aa9.02□□□□□ -0.97
BBS4-218ENST00000569440 PCDH11YQ9BZA8 1340 aa9.02□□□□□ -0.97
BBS4-218ENST00000569440 N4BP2Q86UW6 1770 aaPredicted RBP9.01□□□□□ -0.97
BBS4-218ENST00000569440 NFKBIEO00221 500 aa9.01□□□□□ -0.97
BBS4-218ENST00000569440 ATP6V1AP38606 617 aa9.01□□□□□ -0.97
BBS4-218ENST00000569440 NKX1-1Q15270 411 aaPredicted RBP9.01□□□□□ -0.97
BBS4-218ENST00000569440 RC3H1Q5TC82 1133 aaKnown RBP9.01□□□□□ -0.97
BBS4-218ENST00000569440 LDHDQ86WU2 507 aa9.01□□□□□ -0.97
BBS4-218ENST00000569440 CD163L1Q9NR16 1453 aa9.01□□□□□ -0.97
BBS4-218ENST00000569440 RFC4P35249 363 aa9□□□□□ -0.97
BBS4-218ENST00000569440 DDR1Q08345 913 aa9□□□□□ -0.97
BBS4-218ENST00000569440 RAPGEF4Q8WZA2 1011 aa9□□□□□ -0.97
BBS4-218ENST00000569440 ASAP1Q9ULH1 1129 aa9□□□□□ -0.97
BBS4-218ENST00000569440 MAP3K19Q56UN5 1328 aa9□□□□□ -0.97
BBS4-218ENST00000569440 UBR3Q6ZT12 1888 aa9□□□□□ -0.97
BBS4-218ENST00000569440 RPS6KA4O75676 772 aa8.99□□□□□ -0.97
BBS4-218ENST00000569440 TATP17735 454 aaPredicted RBP8.99□□□□□ -0.97
BBS4-218ENST00000569440 USHBP1Q8N6Y0 703 aa8.99□□□□□ -0.97
BBS4-218ENST00000569440 TNRC18O15417 2968 aaPredicted RBP8.99□□□□□ -0.97
BBS4-218ENST00000569440 DDNO94850 711 aaPredicted RBP8.98□□□□□ -0.97
BBS4-218ENST00000569440 PRR29P0C7W0 189 aa8.98□□□□□ -0.97
BBS4-218ENST00000569440 TM4SF1P30408 202 aa8.98□□□□□ -0.97
BBS4-218ENST00000569440 SLC4A9Q96Q91 983 aa8.98□□□□□ -0.97
BBS4-218ENST00000569440 ATG3Q9NT62 314 aa8.98□□□□□ -0.97
BBS4-218ENST00000569440 FAM208AQ9UK61 1670 aaKnown RBP8.97□□□□□ -0.97
BBS4-218ENST00000569440 C4AP0C0L4 1744 aa8.97□□□□□ -0.97
BBS4-218ENST00000569440 TAF1LQ8IZX4 1826 aa8.97□□□□□ -0.97
BBS4-218ENST00000569440 POLRMTO00411 1230 aaKnown RBP8.97□□□□□ -0.97
BBS4-218ENST00000569440 ERFEQ4G0M1 354 aa8.97□□□□□ -0.97
BBS4-218ENST00000569440 TTLL6Q8N841 843 aa8.97□□□□□ -0.97
BBS4-218ENST00000569440 BEGAINQ9BUH8 593 aa8.97□□□□□ -0.97
BBS4-218ENST00000569440 TAF1DQ9H5J8 278 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms