RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 PRIM1P49642 420 aaKnown RBP21.14■□□□□ 0.97
USB1-215ENST00000569252 GPR162Q16538 588 aa21.14■□□□□ 0.97
USB1-215ENST00000569252 IFNL2Q8IZJ0 200 aa21.14■□□□□ 0.97
USB1-215ENST00000569252 PCDH11XQ9BZA7 1347 aa21.13■□□□□ 0.97
USB1-215ENST00000569252 PCDH11YQ9BZA8 1340 aa21.13■□□□□ 0.97
USB1-215ENST00000569252 ZNF530Q6P9A1 599 aaPredicted RBP21.13■□□□□ 0.97
USB1-215ENST00000569252 MEGF6O75095 1541 aa21.13■□□□□ 0.97
USB1-215ENST00000569252 HSP90AB1P08238 724 aaKnown RBP21.12■□□□□ 0.97
USB1-215ENST00000569252 PHACTR3Q96KR7 559 aa21.12■□□□□ 0.97
USB1-215ENST00000569252 PLEKHF1Q96S99 279 aa21.12■□□□□ 0.97
USB1-215ENST00000569252 MTHFSDQ2M296 383 aaKnown RBP21.11■□□□□ 0.97
USB1-215ENST00000569252 C1QTNF8P60827 252 aa21.1■□□□□ 0.97
USB1-215ENST00000569252 AKAP4Q5JQC9 854 aa21.1■□□□□ 0.97
USB1-215ENST00000569252 RTF1Q92541 710 aaKnown RBP21.1■□□□□ 0.97
USB1-215ENST00000569252 TFCP2L1Q9NZI6 479 aa21.1■□□□□ 0.97
USB1-215ENST00000569252 MAP3K5Q99683 1374 aa21.1■□□□□ 0.97
USB1-215ENST00000569252 QSER1Q2KHR3 1735 aa21.09■□□□□ 0.97
USB1-215ENST00000569252 MSL1Q68DK7 614 aa21.09■□□□□ 0.97
USB1-215ENST00000569252 LY75O60449 1722 aa21.08■□□□□ 0.97
USB1-215ENST00000569252 NEUROD2Q15784 382 aa21.08■□□□□ 0.97
USB1-215ENST00000569252 NFE2L2Q16236 605 aa21.08■□□□□ 0.97
USB1-215ENST00000569252 COL24A1Q17RW2 1714 aa21.08■□□□□ 0.97
USB1-215ENST00000569252 GNAT3A8MTJ3 354 aa21.07■□□□□ 0.96
USB1-215ENST00000569252 PHKG2P15735 406 aa21.07■□□□□ 0.96
USB1-215ENST00000569252 RIPK4P57078 832 aa21.07■□□□□ 0.96
USB1-215ENST00000569252 APAF1O14727 1248 aa21.06■□□□□ 0.96
USB1-215ENST00000569252 MSH5O43196 834 aa21.06■□□□□ 0.96
USB1-215ENST00000569252 YBX3P16989 372 aaKnown RBP eCLIP21.06■□□□□ 0.96
USB1-215ENST00000569252 LMOD3Q0VAK6 560 aa21.06■□□□□ 0.96
USB1-215ENST00000569252 CYP27B1O15528 508 aa21.05■□□□□ 0.96
USB1-215ENST00000569252 POLD1P28340 1107 aa21.05■□□□□ 0.96
USB1-215ENST00000569252 TMPOP42166 694 aaKnown RBP21.05■□□□□ 0.96
USB1-215ENST00000569252 SMIM5Q71RC9 77 aa21.05■□□□□ 0.96
USB1-215ENST00000569252 HTATSF1O43719 755 aaKnown RBP21.04■□□□□ 0.96
USB1-215ENST00000569252 SLC27A3Q5K4L6 730 aa21.04■□□□□ 0.96
USB1-215ENST00000569252 COL23A1Q86Y22 540 aaPredicted RBP21.04■□□□□ 0.96
USB1-215ENST00000569252 DCAF5Q96JK2 942 aa21.04■□□□□ 0.96
USB1-215ENST00000569252 CCNL1Q9UK58 526 aaPredicted RBP21.04■□□□□ 0.96
USB1-215ENST00000569252 WWC3Q9ULE0 1092 aa21.03■□□□□ 0.96
USB1-215ENST00000569252 RRP7AQ9Y3A4 280 aaKnown RBP21.03■□□□□ 0.96
USB1-215ENST00000569252 NKX1-1Q15270 411 aaPredicted RBP21.02■□□□□ 0.96
USB1-215ENST00000569252 MPRIPQ6WCQ1 1025 aa21.02■□□□□ 0.96
USB1-215ENST00000569252 NGEFQ8N5V2 710 aa21.02■□□□□ 0.96
USB1-215ENST00000569252 CEP350Q5VT06 3117 aa21.01■□□□□ 0.95
USB1-215ENST00000569252 AMIGO3Q86WK7 504 aa21■□□□□ 0.95
USB1-215ENST00000569252 SLC16A10Q8TF71 515 aa21■□□□□ 0.95
USB1-215ENST00000569252 ERVV-2B6SEH9 535 aa20.99■□□□□ 0.95
USB1-215ENST00000569252 CABP4P57796 275 aa20.99■□□□□ 0.95
USB1-215ENST00000569252 TEFQ10587 303 aa20.99■□□□□ 0.95
USB1-215ENST00000569252 SALL2Q9Y467 1007 aaPredicted RBP20.99■□□□□ 0.95
USB1-215ENST00000569252 RNMTO43148 476 aaKnown RBP20.98■□□□□ 0.95
USB1-215ENST00000569252 GIGYF1O75420 1035 aaPredicted RBP20.98■□□□□ 0.95
USB1-215ENST00000569252 CALD1Q05682 793 aaKnown RBP20.98■□□□□ 0.95
USB1-215ENST00000569252 C5P01031 1676 aa20.97■□□□□ 0.95
USB1-215ENST00000569252 NCBP3Q53F19 620 aaKnown RBP20.97■□□□□ 0.95
USB1-215ENST00000569252 LGR6Q9HBX8 967 aa20.97■□□□□ 0.95
USB1-215ENST00000569252 PKD1L3Q7Z443 1732 aa20.97■□□□□ 0.95
USB1-215ENST00000569252 TOGARAM1Q9Y4F4 1720 aa20.97■□□□□ 0.95
USB1-215ENST00000569252 MCM10Q7L590 875 aa20.96■□□□□ 0.95
USB1-215ENST00000569252 TMOD3Q9NYL9 352 aa20.96■□□□□ 0.95
USB1-215ENST00000569252 DCTN1Q14203 1278 aa20.94■□□□□ 0.94
USB1-215ENST00000569252 IL17REQ8NFR9 667 aa20.94■□□□□ 0.94
USB1-215ENST00000569252 TAF1LQ8IZX4 1826 aa20.93■□□□□ 0.94
USB1-215ENST00000569252 HNRNPUQ00839 825 aaKnown RBP eCLIP20.93■□□□□ 0.94
USB1-215ENST00000569252 CCDC27Q2M243 656 aa20.93■□□□□ 0.94
USB1-215ENST00000569252 NFATC2IPQ8NCF5 419 aa20.93■□□□□ 0.94
USB1-215ENST00000569252 ZNF526Q8TF50 670 aaPredicted RBP20.92■□□□□ 0.94
USB1-215ENST00000569252 TRIM35Q9UPQ4 493 aa20.92■□□□□ 0.94
USB1-215ENST00000569252 TAF7Q15545 349 aaPredicted RBP20.91■□□□□ 0.94
USB1-215ENST00000569252 PALLDQ8WX93 1383 aa20.91■□□□□ 0.94
USB1-215ENST00000569252 SLC52A2Q9HAB3 445 aa20.91■□□□□ 0.94
USB1-215ENST00000569252 ATP10DQ9P241 1426 aa20.91■□□□□ 0.94
USB1-215ENST00000569252 PHF14O94880 888 aa20.9■□□□□ 0.94
USB1-215ENST00000569252 LAS1LQ9Y4W2 734 aaKnown RBP20.9■□□□□ 0.94
USB1-215ENST00000569252 ITGB4P16144 1822 aa20.9■□□□□ 0.94
USB1-215ENST00000569252 BTBD11A6QL63 1104 aa20.89■□□□□ 0.93
USB1-215ENST00000569252 WWC1Q8IX03 1113 aa20.89■□□□□ 0.93
USB1-215ENST00000569252 C4BP0C0L5 1744 aa20.88■□□□□ 0.93
USB1-215ENST00000569252 WDR63Q8IWG1 891 aa20.88■□□□□ 0.93
USB1-215ENST00000569252 THUMPD2Q9BTF0 503 aaKnown RBP20.88■□□□□ 0.93
USB1-215ENST00000569252 KDM6AO15550 1401 aaPredicted RBP20.87■□□□□ 0.93
USB1-215ENST00000569252 TTC5Q8N0Z6 440 aa20.87■□□□□ 0.93
USB1-215ENST00000569252 PIGBQ92521 554 aa20.87■□□□□ 0.93
USB1-215ENST00000569252 SMARCC1Q92922 1105 aaPredicted RBP20.87■□□□□ 0.93
USB1-215ENST00000569252 CEMIPQ8WUJ3 1361 aa20.86■□□□□ 0.93
USB1-215ENST00000569252 BABAM1Q9NWV8 329 aa20.86■□□□□ 0.93
USB1-215ENST00000569252 GNAI1P63096 354 aa20.85■□□□□ 0.93
USB1-215ENST00000569252 UBR3Q6ZT12 1888 aa20.84■□□□□ 0.93
USB1-215ENST00000569252 TSPYL4Q9UJ04 414 aa20.84■□□□□ 0.93
USB1-215ENST00000569252 GRIN3BO60391 1043 aa20.83■□□□□ 0.93
USB1-215ENST00000569252 HMGB2P26583 209 aaKnown RBP20.83■□□□□ 0.93
USB1-215ENST00000569252 LINC00116Q8NCU8 138 aa20.83■□□□□ 0.93
USB1-215ENST00000569252 CFAP44Q96MT7 982 aa20.83■□□□□ 0.93
USB1-215ENST00000569252 YTHDC1Q96MU7 727 aaKnown RBP20.83■□□□□ 0.93
USB1-215ENST00000569252 GOLGA2Q08379 1002 aa20.82■□□□□ 0.92
USB1-215ENST00000569252 AK7Q96M32 723 aa20.82■□□□□ 0.92
USB1-215ENST00000569252 IFT57Q9NWB7 429 aa20.82■□□□□ 0.92
USB1-215ENST00000569252 MIS18AQ9NYP9 233 aa20.82■□□□□ 0.92
USB1-215ENST00000569252 DLG5Q8TDM6 1919 aa20.82■□□□□ 0.92
USB1-215ENST00000569252 IL16Q14005 1332 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms