RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 KDM6AO15550 1401 aaPredicted RBP15.26■□□□□ 0.03
SNAPC5-208ENST00000568875 MYBBP1AQ9BQG0 1328 aaKnown RBP15.26■□□□□ 0.03
SNAPC5-208ENST00000568875 U2SURPO15042 1029 aaKnown RBP15.26■□□□□ 0.03
SNAPC5-208ENST00000568875 ZBTB7AO95365 584 aa15.26■□□□□ 0.03
SNAPC5-208ENST00000568875 AKAP4Q5JQC9 854 aa15.26■□□□□ 0.03
SNAPC5-208ENST00000568875 RNF123Q5XPI4 1314 aa15.26■□□□□ 0.03
SNAPC5-208ENST00000568875 HMGB2P26583 209 aaKnown RBP15.26■□□□□ 0.03
SNAPC5-208ENST00000568875 MTHFSDQ2M296 383 aaKnown RBP15.26■□□□□ 0.03
SNAPC5-208ENST00000568875 TFCP2L1Q9NZI6 479 aa15.26■□□□□ 0.03
SNAPC5-208ENST00000568875 RBM19Q9Y4C8 960 aaKnown RBP15.26■□□□□ 0.03
SNAPC5-208ENST00000568875 LOC102724428A0A0B4J2F2 783 aa15.25■□□□□ 0.03
SNAPC5-208ENST00000568875 SIK1P57059 783 aa15.25■□□□□ 0.03
SNAPC5-208ENST00000568875 CABP4P57796 275 aa15.25■□□□□ 0.03
SNAPC5-208ENST00000568875 ATF5Q9Y2D1 282 aaPredicted RBP15.25■□□□□ 0.03
SNAPC5-208ENST00000568875 PNPLA7Q6ZV29 1317 aa15.24■□□□□ 0.03
SNAPC5-208ENST00000568875 PTGER2P43116 358 aa15.24■□□□□ 0.03
SNAPC5-208ENST00000568875 NFATC2IPQ8NCF5 419 aa15.24■□□□□ 0.03
SNAPC5-208ENST00000568875 MTFR1LQ9H019 292 aa15.24■□□□□ 0.03
SNAPC5-208ENST00000568875 NUDCQ9Y266 331 aa15.24■□□□□ 0.03
SNAPC5-208ENST00000568875 LGR6Q9HBX8 967 aa15.23■□□□□ 0.03
SNAPC5-208ENST00000568875 SLC16A10Q8TF71 515 aa15.23■□□□□ 0.03
SNAPC5-208ENST00000568875 SGIP1Q9BQI5 828 aa15.23■□□□□ 0.03
SNAPC5-208ENST00000568875 SLC4A9Q96Q91 983 aa15.22■□□□□ 0.03
SNAPC5-208ENST00000568875 RSPH6AQ9H0K4 717 aa15.22■□□□□ 0.03
SNAPC5-208ENST00000568875 TAF1LQ8IZX4 1826 aa15.22■□□□□ 0.03
SNAPC5-208ENST00000568875 RNMTO43148 476 aaKnown RBP15.21■□□□□ 0.03
SNAPC5-208ENST00000568875 ATP6V1AP38606 617 aa15.21■□□□□ 0.03
SNAPC5-208ENST00000568875 ITPK1Q13572 414 aa15.21■□□□□ 0.03
SNAPC5-208ENST00000568875 QSER1Q2KHR3 1735 aa15.21■□□□□ 0.03
SNAPC5-208ENST00000568875 COL23A1Q86Y22 540 aaPredicted RBP15.2■□□□□ 0.02
SNAPC5-208ENST00000568875 PHACTR3Q96KR7 559 aa15.2■□□□□ 0.02
SNAPC5-208ENST00000568875 FCHSD2O94868 740 aa15.2■□□□□ 0.02
SNAPC5-208ENST00000568875 U2AF1L5P0DN76 240 aaPredicted RBP15.2■□□□□ 0.02
SNAPC5-208ENST00000568875 PRKAR2BP31323 418 aa15.2■□□□□ 0.02
SNAPC5-208ENST00000568875 U2AF1Q01081 240 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNAPC5-208ENST00000568875 LINC00116Q8NCU8 138 aa15.2■□□□□ 0.02
SNAPC5-208ENST00000568875 SLC52A2Q9HAB3 445 aa15.2■□□□□ 0.02
SNAPC5-208ENST00000568875 PPP1R1BQ9UD71 204 aaPredicted RBP15.2■□□□□ 0.02
SNAPC5-208ENST00000568875 C5P01031 1676 aa15.2■□□□□ 0.02
SNAPC5-208ENST00000568875 SCN11AQ9UI33 1791 aa15.2■□□□□ 0.02
SNAPC5-208ENST00000568875 TUBGCP6Q96RT7 1819 aa15.19■□□□□ 0.02
SNAPC5-208ENST00000568875 GAS2L2Q8NHY3 880 aa15.19■□□□□ 0.02
SNAPC5-208ENST00000568875 AMIGO3Q86WK7 504 aa15.18■□□□□ 0.02
SNAPC5-208ENST00000568875 FLAD1Q8NFF5 587 aa15.18■□□□□ 0.02
SNAPC5-208ENST00000568875 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
SNAPC5-208ENST00000568875 GNAT3A8MTJ3 354 aa15.17■□□□□ 0.02
SNAPC5-208ENST00000568875 IL17REQ8NFR9 667 aa15.17■□□□□ 0.02
SNAPC5-208ENST00000568875 ANP32EQ9BTT0 268 aa15.17■□□□□ 0.02
SNAPC5-208ENST00000568875 C4BP0C0L5 1744 aa15.17■□□□□ 0.02
SNAPC5-208ENST00000568875 PTCD1O75127 700 aaKnown RBP15.17■□□□□ 0.02
SNAPC5-208ENST00000568875 IRX6P78412 446 aaPredicted RBP15.17■□□□□ 0.02
SNAPC5-208ENST00000568875 AK7Q96M32 723 aa15.17■□□□□ 0.02
SNAPC5-208ENST00000568875 UTRNP46939 3433 aa15.17■□□□□ 0.02
SNAPC5-208ENST00000568875 FANCIQ9NVI1 1328 aa15.16■□□□□ 0.02
SNAPC5-208ENST00000568875 ADAMTS7Q9UKP4 1686 aa15.16■□□□□ 0.02
SNAPC5-208ENST00000568875 MSH5O43196 834 aa15.15■□□□□ 0.02
SNAPC5-208ENST00000568875 RC3H1Q5TC82 1133 aaKnown RBP15.15■□□□□ 0.02
SNAPC5-208ENST00000568875 SMIM5Q71RC9 77 aa15.15■□□□□ 0.02
SNAPC5-208ENST00000568875 ZNF831Q5JPB2 1677 aa15.15■□□□□ 0.02
SNAPC5-208ENST00000568875 MAP3K5Q99683 1374 aa15.15■□□□□ 0.02
SNAPC5-208ENST00000568875 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.14■□□□□ 0.01
SNAPC5-208ENST00000568875 SSFA2P28290 1259 aa15.14■□□□□ 0.01
SNAPC5-208ENST00000568875 ARXQ96QS3 562 aa15.14■□□□□ 0.01
SNAPC5-208ENST00000568875 MRC1P22897 1456 aa15.14■□□□□ 0.01
SNAPC5-208ENST00000568875 VIRMAQ69YN4 1812 aaKnown RBP15.14■□□□□ 0.01
SNAPC5-208ENST00000568875 COL24A1Q17RW2 1714 aa15.14■□□□□ 0.01
SNAPC5-208ENST00000568875 SLC39A6Q13433 755 aa15.14■□□□□ 0.01
SNAPC5-208ENST00000568875 UBR3Q6ZT12 1888 aa15.13■□□□□ 0.01
SNAPC5-208ENST00000568875 GNPATO15228 680 aa15.13■□□□□ 0.01
SNAPC5-208ENST00000568875 GOLGB1Q14789 3259 aaKnown RBP15.13■□□□□ 0.01
SNAPC5-208ENST00000568875 PHF14O94880 888 aa15.12■□□□□ 0.01
SNAPC5-208ENST00000568875 PLEKHF1Q96S99 279 aa15.12■□□□□ 0.01
SNAPC5-208ENST00000568875 SYT17Q9BSW7 474 aa15.12■□□□□ 0.01
SNAPC5-208ENST00000568875 FHDC1Q9C0D6 1143 aaPredicted RBP15.12■□□□□ 0.01
SNAPC5-208ENST00000568875 CEMIPQ8WUJ3 1361 aa15.12■□□□□ 0.01
SNAPC5-208ENST00000568875 POLD1P28340 1107 aa15.12■□□□□ 0.01
SNAPC5-208ENST00000568875 CNTNAP4Q9C0A0 1308 aa15.11■□□□□ 0.01
SNAPC5-208ENST00000568875 MYH14Q7Z406 1995 aaKnown RBP15.11■□□□□ 0.01
SNAPC5-208ENST00000568875 RPS6KA4O75676 772 aa15.11■□□□□ 0.01
SNAPC5-208ENST00000568875 TEFQ10587 303 aa15.11■□□□□ 0.01
SNAPC5-208ENST00000568875 RTCBQ9Y3I0 505 aaKnown RBP15.11■□□□□ 0.01
SNAPC5-208ENST00000568875 MSL1Q68DK7 614 aa15.1■□□□□ 0.01
SNAPC5-208ENST00000568875 COL5A3P25940 1745 aaPredicted RBP15.09■□□□□ 0.01
SNAPC5-208ENST00000568875 HTATSF1O43719 755 aaKnown RBP15.09■□□□□ 0.01
SNAPC5-208ENST00000568875 CRKLP46109 303 aaKnown RBP15.09■□□□□ 0.01
SNAPC5-208ENST00000568875 TRAPPC3LQ5T215 181 aa15.09■□□□□ 0.01
SNAPC5-208ENST00000568875 DNAJC10Q8IXB1 793 aa15.09■□□□□ 0.01
SNAPC5-208ENST00000568875 INTS5Q6P9B9 1019 aaKnown RBP15.09■□□□□ 0.01
SNAPC5-208ENST00000568875 ZNF790Q6PG37 636 aa15.09■□□□□ 0.01
SNAPC5-208ENST00000568875 VSIG10Q8N0Z9 540 aa15.09■□□□□ 0.01
SNAPC5-208ENST00000568875 ARHGEF1Q92888 912 aaKnown RBP15.09■□□□□ 0.01
SNAPC5-208ENST00000568875 ADRA2BP18089 450 aa15.08■□□□□ 0
SNAPC5-208ENST00000568875 KCPQ6ZWJ8 1503 aa15.08■□□□□ 0
SNAPC5-208ENST00000568875 MCM10Q7L590 875 aa15.08■□□□□ 0
SNAPC5-208ENST00000568875 RTF1Q92541 710 aaKnown RBP15.08■□□□□ 0
SNAPC5-208ENST00000568875 CYP19A1P11511 503 aaPredicted RBP15.07■□□□□ 0
SNAPC5-208ENST00000568875 DCTN1Q14203 1278 aa15.07■□□□□ 0
SNAPC5-208ENST00000568875 PNNQ9H307 717 aaKnown RBP15.07■□□□□ 0
SNAPC5-208ENST00000568875 CICQ96RK0 1608 aaPredicted RBP15.07■□□□□ 0
SNAPC5-208ENST00000568875 NEFMP07197 916 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms