RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 HOXD11P31277 338 aaPredicted RBP10.05□□□□□ -0.8
SCAPER-221ENST00000568549 CALD1Q05682 793 aaKnown RBP10.05□□□□□ -0.8
SCAPER-221ENST00000568549 TEFQ10587 303 aa10.05□□□□□ -0.8
SCAPER-221ENST00000568549 THUMPD2Q9BTF0 503 aaKnown RBP10.05□□□□□ -0.8
SCAPER-221ENST00000568549 ZBED9Q6R2W3 1325 aa10.05□□□□□ -0.8
SCAPER-221ENST00000568549 CABP4P57796 275 aa10.04□□□□□ -0.8
SCAPER-221ENST00000568549 ACSBG1Q96GR2 724 aa10.04□□□□□ -0.8
SCAPER-221ENST00000568549 SLC52A2Q9HAB3 445 aa10.04□□□□□ -0.8
SCAPER-221ENST00000568549 ZNF521Q96K83 1311 aa10.04□□□□□ -0.8
SCAPER-221ENST00000568549 PRIM1P49642 420 aaKnown RBP10.03□□□□□ -0.8
SCAPER-221ENST00000568549 FAM196AQ6ZSG2 479 aa10.03□□□□□ -0.8
SCAPER-221ENST00000568549 WDR63Q8IWG1 891 aa10.03□□□□□ -0.8
SCAPER-221ENST00000568549 SYTL4Q96C24 671 aaPredicted RBP10.03□□□□□ -0.8
SCAPER-221ENST00000568549 TNS1Q9HBL0 1735 aaKnown RBP10.03□□□□□ -0.8
SCAPER-221ENST00000568549 TMOD3Q9NYL9 352 aa10.03□□□□□ -0.8
SCAPER-221ENST00000568549 UBR2Q8IWV8 1755 aa10.03□□□□□ -0.8
SCAPER-221ENST00000568549 IL16Q14005 1332 aa10.03□□□□□ -0.8
SCAPER-221ENST00000568549 EP400Q96L91 3159 aa10.02□□□□□ -0.8
SCAPER-221ENST00000568549 TAF7Q15545 349 aaPredicted RBP10.02□□□□□ -0.81
SCAPER-221ENST00000568549 NFATC2IPQ8NCF5 419 aa10.02□□□□□ -0.81
SCAPER-221ENST00000568549 LAS1LQ9Y4W2 734 aaKnown RBP10.02□□□□□ -0.81
SCAPER-221ENST00000568549 BTBD11A6QL63 1104 aa10.01□□□□□ -0.81
SCAPER-221ENST00000568549 KCNQ2O43526 872 aa10.01□□□□□ -0.81
SCAPER-221ENST00000568549 GNAI1P63096 354 aa10.01□□□□□ -0.81
SCAPER-221ENST00000568549 GOLGA2Q08379 1002 aa10.01□□□□□ -0.81
SCAPER-221ENST00000568549 IFT57Q9NWB7 429 aa10.01□□□□□ -0.81
SCAPER-221ENST00000568549 LY75O60449 1722 aa10□□□□□ -0.81
SCAPER-221ENST00000568549 PIGBQ92521 554 aa10□□□□□ -0.81
SCAPER-221ENST00000568549 CFAP44Q96MT7 982 aa10□□□□□ -0.81
SCAPER-221ENST00000568549 BABAM1Q9NWV8 329 aa10□□□□□ -0.81
SCAPER-221ENST00000568549 TSPYL4Q9UJ04 414 aa10□□□□□ -0.81
SCAPER-221ENST00000568549 E9PSI1 815 aa9.99□□□□□ -0.81
SCAPER-221ENST00000568549 CHL1O00533 1208 aa9.99□□□□□ -0.81
SCAPER-221ENST00000568549 TRIM37O94972 964 aa9.99□□□□□ -0.81
SCAPER-221ENST00000568549 ZNF853P0CG23 659 aa9.99□□□□□ -0.81
SCAPER-221ENST00000568549 BCL11BQ9C0K0 894 aaPredicted RBP9.99□□□□□ -0.81
SCAPER-221ENST00000568549 MYH16Q9H6N6 1097 aa9.99□□□□□ -0.81
SCAPER-221ENST00000568549 SPINK5Q9NQ38 1064 aaPredicted RBP9.99□□□□□ -0.81
SCAPER-221ENST00000568549 MIS18AQ9NYP9 233 aa9.99□□□□□ -0.81
SCAPER-221ENST00000568549 C5P01031 1676 aa9.99□□□□□ -0.81
SCAPER-221ENST00000568549 LAMB4A4D0S4 1761 aa9.98□□□□□ -0.81
SCAPER-221ENST00000568549 RGPD3A6NKT7 1758 aaPredicted RBP9.98□□□□□ -0.81
SCAPER-221ENST00000568549 RGPD4Q7Z3J3 1758 aa9.98□□□□□ -0.81
SCAPER-221ENST00000568549 KCPQ6ZWJ8 1503 aa9.98□□□□□ -0.81
SCAPER-221ENST00000568549 SLFN5Q08AF3 891 aa9.98□□□□□ -0.81
SCAPER-221ENST00000568549 SLC39A6Q13433 755 aa9.98□□□□□ -0.81
SCAPER-221ENST00000568549 ZNF790Q6PG37 636 aa9.98□□□□□ -0.81
SCAPER-221ENST00000568549 PTF1AQ7RTS3 328 aa9.98□□□□□ -0.81
SCAPER-221ENST00000568549 TTC5Q8N0Z6 440 aa9.98□□□□□ -0.81
SCAPER-221ENST00000568549 TSR2Q969E8 191 aaKnown RBP9.98□□□□□ -0.81
SCAPER-221ENST00000568549 CDCA7LQ96GN5 454 aa9.98□□□□□ -0.81
SCAPER-221ENST00000568549 MBIPQ9NS73 344 aa9.98□□□□□ -0.81
SCAPER-221ENST00000568549 FANCIQ9NVI1 1328 aa9.98□□□□□ -0.81
SCAPER-221ENST00000568549 ZNF831Q5JPB2 1677 aa9.97□□□□□ -0.81
SCAPER-221ENST00000568549 TJP1Q07157 1748 aa9.97□□□□□ -0.81
SCAPER-221ENST00000568549 SMARCC1Q92922 1105 aaPredicted RBP9.97□□□□□ -0.81
SCAPER-221ENST00000568549 ATG3Q9NT62 314 aa9.97□□□□□ -0.81
SCAPER-221ENST00000568549 ASAP1Q9ULH1 1129 aa9.97□□□□□ -0.81
SCAPER-221ENST00000568549 TAF1LQ8IZX4 1826 aa9.97□□□□□ -0.81
SCAPER-221ENST00000568549 PALLDQ8WX93 1383 aa9.97□□□□□ -0.81
SCAPER-221ENST00000568549 CICQ96RK0 1608 aaPredicted RBP9.96□□□□□ -0.81
SCAPER-221ENST00000568549 KCNQ3O43525 872 aa9.96□□□□□ -0.82
SCAPER-221ENST00000568549 COL5A3P25940 1745 aaPredicted RBP9.96□□□□□ -0.82
SCAPER-221ENST00000568549 PTCD1O75127 700 aaKnown RBP9.95□□□□□ -0.82
SCAPER-221ENST00000568549 EIF4A1P60842 406 aaKnown RBP9.95□□□□□ -0.82
SCAPER-221ENST00000568549 DUSP27Q5VZP5 1158 aa9.95□□□□□ -0.82
SCAPER-221ENST00000568549 TRMT2AQ8IZ69 625 aaKnown RBP9.95□□□□□ -0.82
SCAPER-221ENST00000568549 FMNL2Q96PY5 1086 aa9.95□□□□□ -0.82
SCAPER-221ENST00000568549 RBM42Q9BTD8 480 aaKnown RBP9.95□□□□□ -0.82
SCAPER-221ENST00000568549 CACNA1FO60840 1977 aa9.94□□□□□ -0.82
SCAPER-221ENST00000568549 HEG1Q9ULI3 1381 aa9.94□□□□□ -0.82
SCAPER-221ENST00000568549 APBA3O96018 575 aa9.94□□□□□ -0.82
SCAPER-221ENST00000568549 EXOSC9Q06265 439 aaKnown RBP9.94□□□□□ -0.82
SCAPER-221ENST00000568549 SF3B2Q13435 895 aaKnown RBP9.94□□□□□ -0.82
SCAPER-221ENST00000568549 ZNF496Q96IT1 587 aaPredicted RBP9.94□□□□□ -0.82
SCAPER-221ENST00000568549 RREB1Q92766 1687 aa9.93□□□□□ -0.82
SCAPER-221ENST00000568549 LOC102724428A0A0B4J2F2 783 aa9.93□□□□□ -0.82
SCAPER-221ENST00000568549 SIK1P57059 783 aa9.93□□□□□ -0.82
SCAPER-221ENST00000568549 KRT24Q2M2I5 525 aa9.93□□□□□ -0.82
SCAPER-221ENST00000568549 ILDR2Q71H61 639 aa9.93□□□□□ -0.82
SCAPER-221ENST00000568549 ELL2O00472 640 aaPredicted RBP9.92□□□□□ -0.82
SCAPER-221ENST00000568549 PLSCR1O15162 318 aa9.92□□□□□ -0.82
SCAPER-221ENST00000568549 SNRPA1P09661 255 aaKnown RBP9.92□□□□□ -0.82
SCAPER-221ENST00000568549 TWISTNBQ3B726 338 aaPredicted RBP9.92□□□□□ -0.82
SCAPER-221ENST00000568549 CCDC125Q86Z20 511 aa9.92□□□□□ -0.82
SCAPER-221ENST00000568549 VSIG10Q8N0Z9 540 aa9.92□□□□□ -0.82
SCAPER-221ENST00000568549 C8orf58Q8NAV2 365 aa9.92□□□□□ -0.82
SCAPER-221ENST00000568549 NUP188Q5SRE5 1749 aa9.91□□□□□ -0.82
SCAPER-221ENST00000568549 SOS1Q07889 1333 aaPredicted RBP9.91□□□□□ -0.82
SCAPER-221ENST00000568549 PRAMEF22A3QJZ6 481 aa9.91□□□□□ -0.82
SCAPER-221ENST00000568549 GIGYF1O75420 1035 aaPredicted RBP9.91□□□□□ -0.82
SCAPER-221ENST00000568549 HOXB7P09629 217 aa9.91□□□□□ -0.82
SCAPER-221ENST00000568549 ATP6V1AP38606 617 aa9.91□□□□□ -0.82
SCAPER-221ENST00000568549 BAG6P46379 1132 aa9.91□□□□□ -0.82
SCAPER-221ENST00000568549 TSPYL6Q8N831 410 aa9.91□□□□□ -0.82
SCAPER-221ENST00000568549 SLC4A9Q96Q91 983 aa9.91□□□□□ -0.82
SCAPER-221ENST00000568549 CCNL1Q9UK58 526 aaPredicted RBP9.91□□□□□ -0.82
SCAPER-221ENST00000568549 MYH14Q7Z406 1995 aaKnown RBP9.91□□□□□ -0.82
SCAPER-221ENST00000568549 C4BP0C0L5 1744 aa9.9□□□□□ -0.82
SCAPER-221ENST00000568549 CT47B1P0C2W7 299 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms