RNA–Protein interactions for RNA: ENST00000568365.1

SIRPB1-213, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SIRPB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-213ENST00000568365 CCDC39Q9UFE4 941 aa11.5□□□□□ -0.57
SIRPB1-213ENST00000568365 WASLO00401 505 aaPredicted RBP11.49□□□□□ -0.57
SIRPB1-213ENST00000568365 LRSAM1Q6UWE0 723 aa11.49□□□□□ -0.57
SIRPB1-213ENST00000568365 UPF1Q92900 1129 aaKnown RBP eCLIP11.49□□□□□ -0.57
SIRPB1-213ENST00000568365 ORAI2Q96SN7 254 aa11.49□□□□□ -0.57
SIRPB1-213ENST00000568365 CDK19Q9BWU1 502 aa11.49□□□□□ -0.57
SIRPB1-213ENST00000568365 ITSN1Q15811 1721 aa11.49□□□□□ -0.57
SIRPB1-213ENST00000568365 MON2Q7Z3U7 1717 aa11.49□□□□□ -0.57
SIRPB1-213ENST00000568365 NRKQ7Z2Y5 1582 aa11.49□□□□□ -0.57
SIRPB1-213ENST00000568365 EDC4Q6P2E9 1401 aaKnown RBP11.49□□□□□ -0.57
SIRPB1-213ENST00000568365 ATP10DQ9P241 1426 aa11.49□□□□□ -0.57
SIRPB1-213ENST00000568365 AATKQ6ZMQ8 1374 aa11.49□□□□□ -0.57
SIRPB1-213ENST00000568365 RBSNQ9H1K0 784 aa11.49□□□□□ -0.57
SIRPB1-213ENST00000568365 TUBGCP6Q96RT7 1819 aa11.48□□□□□ -0.57
SIRPB1-213ENST00000568365 PRR36Q9H6K5 1346 aa11.48□□□□□ -0.57
SIRPB1-213ENST00000568365 MCM2P49736 904 aa11.48□□□□□ -0.57
SIRPB1-213ENST00000568365 ZKSCAN5Q9Y2L8 839 aa11.48□□□□□ -0.57
SIRPB1-213ENST00000568365 PHLPP1O60346 1717 aa11.48□□□□□ -0.57
SIRPB1-213ENST00000568365 NHSL1Q5SYE7 1610 aa11.48□□□□□ -0.57
SIRPB1-213ENST00000568365 AKAP12Q02952 1782 aa11.47□□□□□ -0.57
SIRPB1-213ENST00000568365 HMOX1P09601 288 aa11.47□□□□□ -0.57
SIRPB1-213ENST00000568365 IL13P35225 146 aa11.47□□□□□ -0.57
SIRPB1-213ENST00000568365 SYAP1Q96A49 352 aaPredicted RBP11.47□□□□□ -0.57
SIRPB1-213ENST00000568365 PHACTR3Q96KR7 559 aa11.47□□□□□ -0.57
SIRPB1-213ENST00000568365 CABP1Q9NZU7 370 aa11.47□□□□□ -0.57
SIRPB1-213ENST00000568365 AHDC1Q5TGY3 1603 aaPredicted RBP11.47□□□□□ -0.57
SIRPB1-213ENST00000568365 ANKARQ7Z5J8 1434 aa11.47□□□□□ -0.57
SIRPB1-213ENST00000568365 ERC2O15083 957 aa11.46□□□□□ -0.57
SIRPB1-213ENST00000568365 PRPF40AO75400 957 aaKnown RBP11.46□□□□□ -0.57
SIRPB1-213ENST00000568365 SDSP20132 328 aa11.46□□□□□ -0.57
SIRPB1-213ENST00000568365 PRIM1P49642 420 aaKnown RBP11.46□□□□□ -0.57
SIRPB1-213ENST00000568365 ESCO1Q5FWF5 840 aa11.46□□□□□ -0.57
SIRPB1-213ENST00000568365 DDX17Q92841 729 aaKnown RBP11.46□□□□□ -0.57
SIRPB1-213ENST00000568365 R3HCC1Q9Y3T6 440 aaKnown RBP11.46□□□□□ -0.57
SIRPB1-213ENST00000568365 TOPAZ1Q8N9V7 1692 aa11.46□□□□□ -0.57
SIRPB1-213ENST00000568365 PTPRCP08575 1304 aa11.46□□□□□ -0.58
SIRPB1-213ENST00000568365 ELL2O00472 640 aaPredicted RBP11.46□□□□□ -0.58
SIRPB1-213ENST00000568365 DYNC1I1O14576 645 aa11.46□□□□□ -0.58
SIRPB1-213ENST00000568365 HMMRO75330 724 aa11.46□□□□□ -0.58
SIRPB1-213ENST00000568365 C8orf58Q8NAV2 365 aa11.46□□□□□ -0.58
SIRPB1-213ENST00000568365 THUMPD2Q9BTF0 503 aaKnown RBP11.46□□□□□ -0.58
SIRPB1-213ENST00000568365 KIF1AQ12756 1690 aa11.46□□□□□ -0.58
SIRPB1-213ENST00000568365 COL16A1Q07092 1604 aaPredicted RBP11.45□□□□□ -0.58
SIRPB1-213ENST00000568365 KIAA0232Q92628 1395 aa11.45□□□□□ -0.58
SIRPB1-213ENST00000568365 MCCP23508 829 aa11.45□□□□□ -0.58
SIRPB1-213ENST00000568365 CEP85Q6P2H3 762 aa11.45□□□□□ -0.58
SIRPB1-213ENST00000568365 GPT2Q8TD30 523 aa11.45□□□□□ -0.58
SIRPB1-213ENST00000568365 NUDT16Q96DE0 195 aaKnown RBP11.45□□□□□ -0.58
SIRPB1-213ENST00000568365 RTL1A6NKG5 1358 aa11.45□□□□□ -0.58
SIRPB1-213ENST00000568365 IFFO2Q5TF58 517 aa11.44□□□□□ -0.58
SIRPB1-213ENST00000568365 SASS6Q6UVJ0 657 aa11.44□□□□□ -0.58
SIRPB1-213ENST00000568365 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.44□□□□□ -0.58
SIRPB1-213ENST00000568365 OSBPL3Q9H4L5 887 aa11.44□□□□□ -0.58
SIRPB1-213ENST00000568365 RGS12O14924 1447 aa11.44□□□□□ -0.58
SIRPB1-213ENST00000568365 UQCRHLA0A096LP55 91 aa11.43□□□□□ -0.58
SIRPB1-213ENST00000568365 PHF14O94880 888 aa11.43□□□□□ -0.58
SIRPB1-213ENST00000568365 UQCRHP07919 91 aa11.43□□□□□ -0.58
SIRPB1-213ENST00000568365 SSH2Q76I76 1423 aa11.43□□□□□ -0.58
SIRPB1-213ENST00000568365 ZGPATQ8N5A5 531 aaKnown RBP11.43□□□□□ -0.58
SIRPB1-213ENST00000568365 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.43□□□□□ -0.58
SIRPB1-213ENST00000568365 PHF8Q9UPP1 1060 aa11.43□□□□□ -0.58
SIRPB1-213ENST00000568365 ZDHHC9Q9Y397 364 aa11.43□□□□□ -0.58
SIRPB1-213ENST00000568365 PKP1Q13835 747 aa11.43□□□□□ -0.58
SIRPB1-213ENST00000568365 INTS4Q96HW7 963 aaKnown RBP11.43□□□□□ -0.58
SIRPB1-213ENST00000568365 TSPY26PQ9H489 355 aa11.43□□□□□ -0.58
SIRPB1-213ENST00000568365 TMEM63CQ9P1W3 806 aa11.43□□□□□ -0.58
SIRPB1-213ENST00000568365 RBM27Q9P2N5 1060 aaKnown RBP11.43□□□□□ -0.58
SIRPB1-213ENST00000568365 EMILIN1Q9Y6C2 1016 aa11.43□□□□□ -0.58
SIRPB1-213ENST00000568365 N4BP2Q86UW6 1770 aaPredicted RBP11.43□□□□□ -0.58
SIRPB1-213ENST00000568365 SYCE3A1L190 88 aa11.42□□□□□ -0.58
SIRPB1-213ENST00000568365 FOXO3O43524 673 aa11.42□□□□□ -0.58
SIRPB1-213ENST00000568365 ANAPC15P60006 121 aa11.42□□□□□ -0.58
SIRPB1-213ENST00000568365 C16orf71Q8IYS4 520 aaPredicted RBP11.42□□□□□ -0.58
SIRPB1-213ENST00000568365 PXDNQ92626 1479 aa11.42□□□□□ -0.58
SIRPB1-213ENST00000568365 BRD1O95696 1058 aa11.41□□□□□ -0.58
SIRPB1-213ENST00000568365 XPCQ01831 940 aaPredicted RBP11.41□□□□□ -0.58
SIRPB1-213ENST00000568365 CUL4AQ13619 759 aa11.41□□□□□ -0.58
SIRPB1-213ENST00000568365 PTMAP06454 111 aaKnown RBP11.4□□□□□ -0.58
SIRPB1-213ENST00000568365 RBM10P98175 930 aaKnown RBP11.4□□□□□ -0.58
SIRPB1-213ENST00000568365 KIAA2012Q0VF49 1180 aa11.4□□□□□ -0.58
SIRPB1-213ENST00000568365 UVSSAQ2YD98 709 aa11.4□□□□□ -0.58
SIRPB1-213ENST00000568365 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
SIRPB1-213ENST00000568365 COG3Q96JB2 828 aa11.4□□□□□ -0.58
SIRPB1-213ENST00000568365 FAM13BQ9NYF5 915 aa11.4□□□□□ -0.58
SIRPB1-213ENST00000568365 CACNA1FO60840 1977 aa11.4□□□□□ -0.58
SIRPB1-213ENST00000568365 NPHP3Q7Z494 1330 aa11.4□□□□□ -0.58
SIRPB1-213ENST00000568365 EPB41L2O43491 1005 aaKnown RBP11.4□□□□□ -0.58
SIRPB1-213ENST00000568365 NEK4P51957 841 aa11.4□□□□□ -0.58
SIRPB1-213ENST00000568365 FAM184AQ8NB25 1140 aa11.4□□□□□ -0.58
SIRPB1-213ENST00000568365 OTUD7AQ8TE49 926 aaPredicted RBP11.4□□□□□ -0.58
SIRPB1-213ENST00000568365 TMX3Q96JJ7 454 aa11.4□□□□□ -0.58
SIRPB1-213ENST00000568365 CCDC61Q9Y6R9 512 aa11.4□□□□□ -0.58
SIRPB1-213ENST00000568365 SOS2Q07890 1332 aaPredicted RBP11.39□□□□□ -0.59
SIRPB1-213ENST00000568365 SMARCA5O60264 1052 aaPredicted RBP11.39□□□□□ -0.59
SIRPB1-213ENST00000568365 PDE1AP54750 535 aa11.39□□□□□ -0.59
SIRPB1-213ENST00000568365 IL17RAQ96F46 866 aa11.39□□□□□ -0.59
SIRPB1-213ENST00000568365 RGPD1P0DJD0 1748 aa11.39□□□□□ -0.59
SIRPB1-213ENST00000568365 TRPM3Q9HCF6 1732 aaPredicted RBP11.39□□□□□ -0.59
SIRPB1-213ENST00000568365 CHL1O00533 1208 aa11.38□□□□□ -0.59
SIRPB1-213ENST00000568365 LETM1O95202 739 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms