RNA–Protein interactions for RNA: ENST00000568283.5

NUP93-216, Transcript of nucleoporin 93, humanhuman

TSL 4

Gene NUP93, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-216ENST00000568283 IL16Q14005 1332 aa13.36□□□□□ -0.27
NUP93-216ENST00000568283 TAF7Q15545 349 aaPredicted RBP13.35□□□□□ -0.27
NUP93-216ENST00000568283 SYTL4Q96C24 671 aaPredicted RBP13.35□□□□□ -0.27
NUP93-216ENST00000568283 BCL11BQ9C0K0 894 aaPredicted RBP13.35□□□□□ -0.27
NUP93-216ENST00000568283 KDM6AO15550 1401 aaPredicted RBP13.35□□□□□ -0.27
NUP93-216ENST00000568283 PRIM1P49642 420 aaKnown RBP13.34□□□□□ -0.27
NUP93-216ENST00000568283 GNAI1P63096 354 aa13.34□□□□□ -0.27
NUP93-216ENST00000568283 CCDC125Q86Z20 511 aa13.34□□□□□ -0.27
NUP93-216ENST00000568283 NFATC2IPQ8NCF5 419 aa13.34□□□□□ -0.27
NUP93-216ENST00000568283 SALL2Q9Y467 1007 aaPredicted RBP13.34□□□□□ -0.27
NUP93-216ENST00000568283 DCTN1Q14203 1278 aa13.33□□□□□ -0.28
NUP93-216ENST00000568283 FAM182BQ5T319 152 aa13.33□□□□□ -0.28
NUP93-216ENST00000568283 SMARCC1Q92922 1105 aaPredicted RBP13.33□□□□□ -0.28
NUP93-216ENST00000568283 ACSBG1Q96GR2 724 aa13.33□□□□□ -0.28
NUP93-216ENST00000568283 SBF2Q86WG5 1849 aa13.33□□□□□ -0.28
NUP93-216ENST00000568283 DOT1LQ8TEK3 1739 aa13.33□□□□□ -0.28
NUP93-216ENST00000568283 ITGB4P16144 1822 aa13.32□□□□□ -0.28
NUP93-216ENST00000568283 NHSQ6T4R5 1651 aa13.32□□□□□ -0.28
NUP93-216ENST00000568283 MRC1P22897 1456 aa13.32□□□□□ -0.28
NUP93-216ENST00000568283 BTBD11A6QL63 1104 aa13.32□□□□□ -0.28
NUP93-216ENST00000568283 GOLGA2Q08379 1002 aa13.32□□□□□ -0.28
NUP93-216ENST00000568283 SF3B2Q13435 895 aaKnown RBP13.32□□□□□ -0.28
NUP93-216ENST00000568283 CFAP44Q96MT7 982 aa13.32□□□□□ -0.28
NUP93-216ENST00000568283 IFT57Q9NWB7 429 aa13.32□□□□□ -0.28
NUP93-216ENST00000568283 ZBED9Q6R2W3 1325 aa13.32□□□□□ -0.28
NUP93-216ENST00000568283 TTC5Q8N0Z6 440 aa13.31□□□□□ -0.28
NUP93-216ENST00000568283 PIGBQ92521 554 aa13.31□□□□□ -0.28
NUP93-216ENST00000568283 MYH16Q9H6N6 1097 aa13.31□□□□□ -0.28
NUP93-216ENST00000568283 TOGARAM1Q9Y4F4 1720 aa13.3□□□□□ -0.28
NUP93-216ENST00000568283 E9PSI1 815 aa13.3□□□□□ -0.28
NUP93-216ENST00000568283 TRIM37O94972 964 aa13.3□□□□□ -0.28
NUP93-216ENST00000568283 CHMP4AQ9BY43 222 aa13.3□□□□□ -0.28
NUP93-216ENST00000568283 TSPYL4Q9UJ04 414 aa13.3□□□□□ -0.28
NUP93-216ENST00000568283 ZNF521Q96K83 1311 aa13.3□□□□□ -0.28
NUP93-216ENST00000568283 SIPA1L3O60292 1781 aaPredicted RBP13.3□□□□□ -0.28
NUP93-216ENST00000568283 CHL1O00533 1208 aa13.29□□□□□ -0.28
NUP93-216ENST00000568283 KCNQ2O43526 872 aa13.29□□□□□ -0.28
NUP93-216ENST00000568283 THUMPD2Q9BTF0 503 aaKnown RBP13.29□□□□□ -0.28
NUP93-216ENST00000568283 LAS1LQ9Y4W2 734 aaKnown RBP13.29□□□□□ -0.28
NUP93-216ENST00000568283 PLSCR1O15162 318 aa13.28□□□□□ -0.28
NUP93-216ENST00000568283 ZNF853P0CG23 659 aa13.28□□□□□ -0.28
NUP93-216ENST00000568283 ZNF790Q6PG37 636 aa13.28□□□□□ -0.28
NUP93-216ENST00000568283 SENP3-EIF4A1A0A087X0R7 540 aa13.27□□□□□ -0.29
NUP93-216ENST00000568283 APBA3O96018 575 aa13.27□□□□□ -0.29
NUP93-216ENST00000568283 FMNL2Q96PY5 1086 aa13.27□□□□□ -0.29
NUP93-216ENST00000568283 TEX13AQ9BXU3 409 aaPredicted RBP13.27□□□□□ -0.29
NUP93-216ENST00000568283 ATG3Q9NT62 314 aa13.27□□□□□ -0.29
NUP93-216ENST00000568283 BTAF1O14981 1849 aa13.27□□□□□ -0.29
NUP93-216ENST00000568283 BAG6P46379 1132 aa13.26□□□□□ -0.29
NUP93-216ENST00000568283 SOS1Q07889 1333 aaPredicted RBP13.26□□□□□ -0.29
NUP93-216ENST00000568283 VSIG10Q8N0Z9 540 aa13.26□□□□□ -0.29
NUP93-216ENST00000568283 SLFN5Q08AF3 891 aa13.25□□□□□ -0.29
NUP93-216ENST00000568283 YTHDC1Q96MU7 727 aaKnown RBP13.25□□□□□ -0.29
NUP93-216ENST00000568283 MBIPQ9NS73 344 aa13.25□□□□□ -0.29
NUP93-216ENST00000568283 ASAP1Q9ULH1 1129 aa13.25□□□□□ -0.29
NUP93-216ENST00000568283 KDM3BQ7LBC6 1761 aa13.25□□□□□ -0.29
NUP93-216ENST00000568283 PALLDQ8WX93 1383 aa13.24□□□□□ -0.29
NUP93-216ENST00000568283 SLC39A6Q13433 755 aa13.24□□□□□ -0.29
NUP93-216ENST00000568283 SLC27A3Q5K4L6 730 aa13.24□□□□□ -0.29
NUP93-216ENST00000568283 MIS18AQ9NYP9 233 aa13.24□□□□□ -0.29
NUP93-216ENST00000568283 PAPPAQ13219 1627 aa13.24□□□□□ -0.29
NUP93-216ENST00000568283 RGPD3A6NKT7 1758 aaPredicted RBP13.23□□□□□ -0.29
NUP93-216ENST00000568283 RGPD4Q7Z3J3 1758 aa13.23□□□□□ -0.29
NUP93-216ENST00000568283 HOXB7P09629 217 aa13.23□□□□□ -0.29
NUP93-216ENST00000568283 SNRPA1P09661 255 aaKnown RBP13.23□□□□□ -0.29
NUP93-216ENST00000568283 EIF4A1P60842 406 aaKnown RBP13.23□□□□□ -0.29
NUP93-216ENST00000568283 RBM42Q9BTD8 480 aaKnown RBP13.23□□□□□ -0.29
NUP93-216ENST00000568283 TNS1Q9HBL0 1735 aaKnown RBP13.22□□□□□ -0.29
NUP93-216ENST00000568283 ZNF831Q5JPB2 1677 aa13.22□□□□□ -0.29
NUP93-216ENST00000568283 FANCIQ9NVI1 1328 aa13.22□□□□□ -0.29
NUP93-216ENST00000568283 LOC102724428A0A0B4J2F2 783 aa13.22□□□□□ -0.29
NUP93-216ENST00000568283 PTCD1O75127 700 aaKnown RBP13.22□□□□□ -0.29
NUP93-216ENST00000568283 CT47B1P0C2W7 299 aaPredicted RBP13.22□□□□□ -0.29
NUP93-216ENST00000568283 SIK1P57059 783 aa13.22□□□□□ -0.29
NUP93-216ENST00000568283 TRMT2AQ8IZ69 625 aaKnown RBP13.22□□□□□ -0.29
NUP93-216ENST00000568283 ZNF496Q96IT1 587 aaPredicted RBP13.22□□□□□ -0.29
NUP93-216ENST00000568283 UBR2Q8IWV8 1755 aa13.22□□□□□ -0.29
NUP93-216ENST00000568283 HEG1Q9ULI3 1381 aa13.21□□□□□ -0.29
NUP93-216ENST00000568283 STARD3NLO95772 234 aa13.21□□□□□ -0.29
NUP93-216ENST00000568283 ATP6V1AP38606 617 aa13.21□□□□□ -0.29
NUP93-216ENST00000568283 PTF1AQ7RTS3 328 aa13.21□□□□□ -0.29
NUP93-216ENST00000568283 TSR2Q969E8 191 aaKnown RBP13.21□□□□□ -0.29
NUP93-216ENST00000568283 ZNF428Q96B54 188 aa13.21□□□□□ -0.29
NUP93-216ENST00000568283 CCNL1Q9UK58 526 aaPredicted RBP13.21□□□□□ -0.29
NUP93-216ENST00000568283 LY75O60449 1722 aa13.21□□□□□ -0.3
NUP93-216ENST00000568283 GIGYF1O75420 1035 aaPredicted RBP13.2□□□□□ -0.3
NUP93-216ENST00000568283 TXNRD1Q16881 649 aa13.2□□□□□ -0.3
NUP93-216ENST00000568283 CDCA7LQ96GN5 454 aa13.2□□□□□ -0.3
NUP93-216ENST00000568283 KCPQ6ZWJ8 1503 aa13.19□□□□□ -0.3
NUP93-216ENST00000568283 KCNQ3O43525 872 aa13.19□□□□□ -0.3
NUP93-216ENST00000568283 DUSP27Q5VZP5 1158 aa13.19□□□□□ -0.3
NUP93-216ENST00000568283 SPINK5Q9NQ38 1064 aaPredicted RBP13.19□□□□□ -0.3
NUP93-216ENST00000568283 EXOSC9Q06265 439 aaKnown RBP13.18□□□□□ -0.3
NUP93-216ENST00000568283 TWISTNBQ3B726 338 aaPredicted RBP13.18□□□□□ -0.3
NUP93-216ENST00000568283 CAMKK2Q96RR4 588 aa13.18□□□□□ -0.3
NUP93-216ENST00000568283 CICQ96RK0 1608 aaPredicted RBP13.17□□□□□ -0.3
NUP93-216ENST00000568283 MYCNP04198 464 aaPredicted RBP13.17□□□□□ -0.3
NUP93-216ENST00000568283 EN1Q05925 392 aaPredicted RBP13.17□□□□□ -0.3
NUP93-216ENST00000568283 RC3H1Q5TC82 1133 aaKnown RBP13.17□□□□□ -0.3
NUP93-216ENST00000568283 ERBB4Q15303 1308 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms