RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 TAF3Q5VWG9 929 aa12.94□□□□□ -0.34
PALB2-206ENST00000568219 KRT222Q8N1A0 295 aa12.94□□□□□ -0.34
PALB2-206ENST00000568219 TIGD1Q96MW7 591 aa12.94□□□□□ -0.34
PALB2-206ENST00000568219 KIF21AQ7Z4S6 1674 aa12.94□□□□□ -0.34
PALB2-206ENST00000568219 ZNF608Q9ULD9 1512 aaPredicted RBP12.93□□□□□ -0.34
PALB2-206ENST00000568219 ZSCAN20P17040 1043 aaPredicted RBP12.93□□□□□ -0.34
PALB2-206ENST00000568219 NME9Q86XW9 330 aa12.93□□□□□ -0.34
PALB2-206ENST00000568219 ARHGAP45Q92619 1136 aa12.93□□□□□ -0.34
PALB2-206ENST00000568219 GTF3C6Q969F1 213 aa12.93□□□□□ -0.34
PALB2-206ENST00000568219 PPIP5K1Q6PFW1 1433 aa12.93□□□□□ -0.34
PALB2-206ENST00000568219 ARGLU1Q9NWB6 273 aaPredicted RBP12.93□□□□□ -0.34
PALB2-206ENST00000568219 OGFRQ9NZT2 677 aa12.93□□□□□ -0.34
PALB2-206ENST00000568219 LRRFIP2Q9Y608 721 aaKnown RBP12.93□□□□□ -0.34
PALB2-206ENST00000568219 IL16Q14005 1332 aa12.93□□□□□ -0.34
PALB2-206ENST00000568219 GPS2Q13227 327 aa12.93□□□□□ -0.34
PALB2-206ENST00000568219 WAPLQ7Z5K2 1190 aa12.93□□□□□ -0.34
PALB2-206ENST00000568219 SYNJ2O15056 1496 aa12.92□□□□□ -0.34
PALB2-206ENST00000568219 KINO60870 393 aaKnown RBP12.92□□□□□ -0.34
PALB2-206ENST00000568219 DDIT3P35638 169 aa12.92□□□□□ -0.34
PALB2-206ENST00000568219 KIF18AQ8NI77 898 aa12.92□□□□□ -0.34
PALB2-206ENST00000568219 ZRANB1Q9UGI0 708 aa12.92□□□□□ -0.34
PALB2-206ENST00000568219 SAMD9Q5K651 1589 aa12.92□□□□□ -0.34
PALB2-206ENST00000568219 NPC1L1Q9UHC9 1359 aa12.92□□□□□ -0.34
PALB2-206ENST00000568219 PDILTQ8N807 584 aa12.92□□□□□ -0.34
PALB2-206ENST00000568219 F13A1P00488 732 aa12.92□□□□□ -0.34
PALB2-206ENST00000568219 SKILP12757 684 aa12.92□□□□□ -0.34
PALB2-206ENST00000568219 AK2P54819 239 aa12.92□□□□□ -0.34
PALB2-206ENST00000568219 CLASRPQ8N2M8 674 aaKnown RBP12.92□□□□□ -0.34
PALB2-206ENST00000568219 FAM200AQ8TCP9 573 aa12.92□□□□□ -0.34
PALB2-206ENST00000568219 ME1P48163 572 aa12.91□□□□□ -0.34
PALB2-206ENST00000568219 TTLL5Q6EMB2 1281 aa12.91□□□□□ -0.34
PALB2-206ENST00000568219 UBXN4Q92575 508 aa12.91□□□□□ -0.34
PALB2-206ENST00000568219 NRBP1Q9UHY1 535 aa12.91□□□□□ -0.34
PALB2-206ENST00000568219 PDCP20941 246 aa12.91□□□□□ -0.34
PALB2-206ENST00000568219 CCT4P50991 539 aaKnown RBP12.91□□□□□ -0.34
PALB2-206ENST00000568219 TYRO3Q06418 890 aa12.91□□□□□ -0.34
PALB2-206ENST00000568219 NOS1P29475 1434 aa12.91□□□□□ -0.34
PALB2-206ENST00000568219 LAMC3Q9Y6N6 1575 aa12.91□□□□□ -0.34
PALB2-206ENST00000568219 STK11IPQ8N1F8 1099 aa12.91□□□□□ -0.34
PALB2-206ENST00000568219 NOL10Q9BSC4 688 aaKnown RBP12.91□□□□□ -0.34
PALB2-206ENST00000568219 IBTKQ9P2D0 1353 aaPredicted RBP12.91□□□□□ -0.34
PALB2-206ENST00000568219 NUTM2GQ5VZR2 741 aa12.9□□□□□ -0.34
PALB2-206ENST00000568219 RAB11FIP3O75154 756 aa12.9□□□□□ -0.34
PALB2-206ENST00000568219 CHMLP26374 656 aa12.9□□□□□ -0.34
PALB2-206ENST00000568219 GUCY1B3Q02153 619 aa12.9□□□□□ -0.34
PALB2-206ENST00000568219 FEZ1Q99689 392 aa12.9□□□□□ -0.34
PALB2-206ENST00000568219 FSD1Q9BTV5 496 aa12.9□□□□□ -0.34
PALB2-206ENST00000568219 ATP10BO94823 1461 aa12.9□□□□□ -0.34
PALB2-206ENST00000568219 ISM2Q6H9L7 571 aa12.9□□□□□ -0.34
PALB2-206ENST00000568219 SIL1Q9H173 461 aa12.9□□□□□ -0.34
PALB2-206ENST00000568219 NUP160Q12769 1436 aa12.89□□□□□ -0.35
PALB2-206ENST00000568219 URI1O94763 535 aaPredicted RBP12.89□□□□□ -0.35
PALB2-206ENST00000568219 UTP14CQ5TAP6 766 aaKnown RBP12.89□□□□□ -0.35
PALB2-206ENST00000568219 CALCOCO1Q9P1Z2 691 aa12.89□□□□□ -0.35
PALB2-206ENST00000568219 NLRP1Q9C000 1473 aa12.89□□□□□ -0.35
PALB2-206ENST00000568219 RNF20Q5VTR2 975 aa12.89□□□□□ -0.35
PALB2-206ENST00000568219 TRIM34Q9BYJ4 488 aa12.89□□□□□ -0.35
PALB2-206ENST00000568219 ZMYM3Q14202 1370 aa12.89□□□□□ -0.35
PALB2-206ENST00000568219 ADGRL2O95490 1459 aa12.89□□□□□ -0.35
PALB2-206ENST00000568219 BIN1O00499 593 aa12.89□□□□□ -0.35
PALB2-206ENST00000568219 C14orf93Q9H972 538 aaKnown RBP12.89□□□□□ -0.35
PALB2-206ENST00000568219 ELF2Q15723 593 aa12.88□□□□□ -0.35
PALB2-206ENST00000568219 BLOC1S2Q6QNY1 142 aa12.88□□□□□ -0.35
PALB2-206ENST00000568219 POLKQ9UBT6 870 aa12.88□□□□□ -0.35
PALB2-206ENST00000568219 PLA2R1Q13018 1463 aa12.88□□□□□ -0.35
PALB2-206ENST00000568219 G2E3Q7L622 706 aa12.88□□□□□ -0.35
PALB2-206ENST00000568219 PAXBP1Q9Y5B6 917 aa12.88□□□□□ -0.35
PALB2-206ENST00000568219 AIMP1Q12904 312 aaKnown RBP12.88□□□□□ -0.35
PALB2-206ENST00000568219 TMCO3Q6UWJ1 677 aa12.88□□□□□ -0.35
PALB2-206ENST00000568219 ZNF710Q8N1W2 664 aa12.88□□□□□ -0.35
PALB2-206ENST00000568219 ZSWIM4Q9H7M6 989 aa12.88□□□□□ -0.35
PALB2-206ENST00000568219 CERS3Q8IU89 383 aa12.88□□□□□ -0.35
PALB2-206ENST00000568219 INTS4Q96HW7 963 aaKnown RBP12.88□□□□□ -0.35
PALB2-206ENST00000568219 USP16Q9Y5T5 823 aa12.88□□□□□ -0.35
PALB2-206ENST00000568219 SMTNL1A8MU46 457 aa12.87□□□□□ -0.35
PALB2-206ENST00000568219 KIAA1524Q8TCG1 905 aa12.87□□□□□ -0.35
PALB2-206ENST00000568219 GOLGA6L1Q8N7Z2 621 aa12.87□□□□□ -0.35
PALB2-206ENST00000568219 ERCC4Q92889 916 aaPredicted RBP12.87□□□□□ -0.35
PALB2-206ENST00000568219 RAPGEF6Q8TEU7 1601 aa12.86□□□□□ -0.35
PALB2-206ENST00000568219 CCDC30Q5VVM6 783 aa12.86□□□□□ -0.35
PALB2-206ENST00000568219 PLEKHF1Q96S99 279 aa12.86□□□□□ -0.35
PALB2-206ENST00000568219 ZNF215Q9UL58 517 aaPredicted RBP12.86□□□□□ -0.35
PALB2-206ENST00000568219 PSMA5P28066 241 aa12.86□□□□□ -0.35
PALB2-206ENST00000568219 G3BP1Q13283 466 aaKnown RBP eCLIP12.86□□□□□ -0.35
PALB2-206ENST00000568219 HDGFL1Q5TGJ6 251 aa12.86□□□□□ -0.35
PALB2-206ENST00000568219 TXNDC2Q86VQ3 553 aa12.86□□□□□ -0.35
PALB2-206ENST00000568219 NGDNQ8NEJ9 315 aaKnown RBP12.86□□□□□ -0.35
PALB2-206ENST00000568219 NAT10Q9H0A0 1025 aaKnown RBP12.86□□□□□ -0.35
PALB2-206ENST00000568219 SCAND2PQ9GZW5 306 aaPredicted RBP12.85□□□□□ -0.35
PALB2-206ENST00000568219 CBX8Q9HC52 389 aa12.85□□□□□ -0.35
PALB2-206ENST00000568219 A0A087WWV3 80 aa12.85□□□□□ -0.35
PALB2-206ENST00000568219 SERPINC1P01008 464 aa12.85□□□□□ -0.35
PALB2-206ENST00000568219 LIG1P18858 919 aa12.85□□□□□ -0.35
PALB2-206ENST00000568219 SFPQP23246 707 aaKnown RBP eCLIP12.85□□□□□ -0.35
PALB2-206ENST00000568219 SNW1Q13573 536 aaKnown RBP12.85□□□□□ -0.35
PALB2-206ENST00000568219 UNC5CLQ8IV45 518 aa12.85□□□□□ -0.35
PALB2-206ENST00000568219 LRRC2Q9BYS8 371 aa12.85□□□□□ -0.35
PALB2-206ENST00000568219 PPP6R1Q9UPN7 881 aa12.85□□□□□ -0.35
PALB2-206ENST00000568219 ABCC2Q92887 1545 aa12.85□□□□□ -0.35
PALB2-206ENST00000568219 HSP90AA4PQ58FG1 418 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms