RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 WDR63Q8IWG1 891 aa20.53■□□□□ 0.88
SPG7-218ENST00000568205 BTBD11A6QL63 1104 aa20.52■□□□□ 0.88
SPG7-218ENST00000568205 IL16Q14005 1332 aa20.52■□□□□ 0.87
SPG7-218ENST00000568205 IFT57Q9NWB7 429 aa20.51■□□□□ 0.87
SPG7-218ENST00000568205 SBF2Q86WG5 1849 aa20.5■□□□□ 0.87
SPG7-218ENST00000568205 SMARCC1Q92922 1105 aaPredicted RBP20.5■□□□□ 0.87
SPG7-218ENST00000568205 CFAP44Q96MT7 982 aa20.5■□□□□ 0.87
SPG7-218ENST00000568205 ATG3Q9NT62 314 aa20.5■□□□□ 0.87
SPG7-218ENST00000568205 BABAM1Q9NWV8 329 aa20.5■□□□□ 0.87
SPG7-218ENST00000568205 MIS18AQ9NYP9 233 aa20.5■□□□□ 0.87
SPG7-218ENST00000568205 ASAP1Q9ULH1 1129 aa20.5■□□□□ 0.87
SPG7-218ENST00000568205 ZBED9Q6R2W3 1325 aa20.5■□□□□ 0.87
SPG7-218ENST00000568205 CHL1O00533 1208 aa20.49■□□□□ 0.87
SPG7-218ENST00000568205 ZNF853P0CG23 659 aa20.49■□□□□ 0.87
SPG7-218ENST00000568205 GNAI1P63096 354 aa20.49■□□□□ 0.87
SPG7-218ENST00000568205 SLC39A6Q13433 755 aa20.49■□□□□ 0.87
SPG7-218ENST00000568205 TSPYL4Q9UJ04 414 aa20.49■□□□□ 0.87
SPG7-218ENST00000568205 LAS1LQ9Y4W2 734 aaKnown RBP20.49■□□□□ 0.87
SPG7-218ENST00000568205 ITGB4P16144 1822 aa20.48■□□□□ 0.87
SPG7-218ENST00000568205 EP400Q96L91 3159 aa20.48■□□□□ 0.87
SPG7-218ENST00000568205 APBA3O96018 575 aa20.48■□□□□ 0.87
SPG7-218ENST00000568205 SF3B2Q13435 895 aaKnown RBP20.48■□□□□ 0.87
SPG7-218ENST00000568205 ZNF790Q6PG37 636 aa20.48■□□□□ 0.87
SPG7-218ENST00000568205 CCDC125Q86Z20 511 aa20.48■□□□□ 0.87
SPG7-218ENST00000568205 TTC5Q8N0Z6 440 aa20.48■□□□□ 0.87
SPG7-218ENST00000568205 PALLDQ8WX93 1383 aa20.47■□□□□ 0.87
SPG7-218ENST00000568205 SIPA1L3O60292 1781 aaPredicted RBP20.47■□□□□ 0.87
SPG7-218ENST00000568205 GOLGA2Q08379 1002 aa20.47■□□□□ 0.87
SPG7-218ENST00000568205 YTHDC1Q96MU7 727 aaKnown RBP20.47■□□□□ 0.87
SPG7-218ENST00000568205 BTAF1O14981 1849 aa20.46■□□□□ 0.87
SPG7-218ENST00000568205 KCNQ3O43525 872 aa20.46■□□□□ 0.87
SPG7-218ENST00000568205 UPF1Q92900 1129 aaKnown RBP eCLIP20.46■□□□□ 0.87
SPG7-218ENST00000568205 SPINK5Q9NQ38 1064 aaPredicted RBP20.46■□□□□ 0.87
SPG7-218ENST00000568205 MBIPQ9NS73 344 aa20.46■□□□□ 0.87
SPG7-218ENST00000568205 VIRMAQ69YN4 1812 aaKnown RBP20.46■□□□□ 0.87
SPG7-218ENST00000568205 KAT6BQ8WYB5 2073 aa20.46■□□□□ 0.87
SPG7-218ENST00000568205 TNS1Q9HBL0 1735 aaKnown RBP20.44■□□□□ 0.86
SPG7-218ENST00000568205 PLSCR1O15162 318 aa20.44■□□□□ 0.86
SPG7-218ENST00000568205 PTCD1O75127 700 aaKnown RBP20.44■□□□□ 0.86
SPG7-218ENST00000568205 PAPPAQ13219 1627 aa20.44■□□□□ 0.86
SPG7-218ENST00000568205 E9PSI1 815 aa20.43■□□□□ 0.86
SPG7-218ENST00000568205 BAG6P46379 1132 aa20.43■□□□□ 0.86
SPG7-218ENST00000568205 TSR2Q969E8 191 aaKnown RBP20.43■□□□□ 0.86
SPG7-218ENST00000568205 ZNF496Q96IT1 587 aaPredicted RBP20.43■□□□□ 0.86
SPG7-218ENST00000568205 MYH16Q9H6N6 1097 aa20.43■□□□□ 0.86
SPG7-218ENST00000568205 KCPQ6ZWJ8 1503 aa20.43■□□□□ 0.86
SPG7-218ENST00000568205 EIF4A1P60842 406 aaKnown RBP20.42■□□□□ 0.86
SPG7-218ENST00000568205 CDCA7LQ96GN5 454 aa20.42■□□□□ 0.86
SPG7-218ENST00000568205 FMNL2Q96PY5 1086 aa20.42■□□□□ 0.86
SPG7-218ENST00000568205 RBM42Q9BTD8 480 aaKnown RBP20.42■□□□□ 0.86
SPG7-218ENST00000568205 FANCIQ9NVI1 1328 aa20.42■□□□□ 0.86
SPG7-218ENST00000568205 LOC102724428A0A0B4J2F2 783 aa20.41■□□□□ 0.86
SPG7-218ENST00000568205 SIK1P57059 783 aa20.41■□□□□ 0.86
SPG7-218ENST00000568205 SLFN5Q08AF3 891 aa20.41■□□□□ 0.86
SPG7-218ENST00000568205 KDM3BQ7LBC6 1761 aa20.4■□□□□ 0.86
SPG7-218ENST00000568205 SLC4A9Q96Q91 983 aa20.4■□□□□ 0.86
SPG7-218ENST00000568205 HEG1Q9ULI3 1381 aa20.39■□□□□ 0.85
SPG7-218ENST00000568205 EN1Q05925 392 aaPredicted RBP20.39■□□□□ 0.85
SPG7-218ENST00000568205 TXNRD1Q16881 649 aa20.39■□□□□ 0.85
SPG7-218ENST00000568205 DEFB132Q7Z7B7 95 aa20.39■□□□□ 0.85
SPG7-218ENST00000568205 VSIG10Q8N0Z9 540 aa20.39■□□□□ 0.85
SPG7-218ENST00000568205 CAMKK2Q96RR4 588 aa20.39■□□□□ 0.85
SPG7-218ENST00000568205 CCNL1Q9UK58 526 aaPredicted RBP20.39■□□□□ 0.85
SPG7-218ENST00000568205 SLC27A3Q5K4L6 730 aa20.38■□□□□ 0.85
SPG7-218ENST00000568205 UBR2Q8IWV8 1755 aa20.37■□□□□ 0.85
SPG7-218ENST00000568205 ATP6V1AP38606 617 aa20.37■□□□□ 0.85
SPG7-218ENST00000568205 TRMT2AQ8IZ69 625 aaKnown RBP20.37■□□□□ 0.85
SPG7-218ENST00000568205 PROM2Q8N271 834 aa20.37■□□□□ 0.85
SPG7-218ENST00000568205 SNRPA1P09661 255 aaKnown RBP20.36■□□□□ 0.85
SPG7-218ENST00000568205 KCNQ4P56696 695 aa20.36■□□□□ 0.85
SPG7-218ENST00000568205 ITPK1Q13572 414 aa20.36■□□□□ 0.85
SPG7-218ENST00000568205 EZH2Q15910 746 aaKnown RBP20.36■□□□□ 0.85
SPG7-218ENST00000568205 KRT24Q2M2I5 525 aa20.36■□□□□ 0.85
SPG7-218ENST00000568205 GIGYF1O75420 1035 aaPredicted RBP20.35■□□□□ 0.85
SPG7-218ENST00000568205 DUSP27Q5VZP5 1158 aa20.35■□□□□ 0.85
SPG7-218ENST00000568205 DNAJC10Q8IXB1 793 aa20.35■□□□□ 0.85
SPG7-218ENST00000568205 LRRC4BQ9NT99 713 aa20.35■□□□□ 0.85
SPG7-218ENST00000568205 RGPD3A6NKT7 1758 aaPredicted RBP20.34■□□□□ 0.85
SPG7-218ENST00000568205 RGPD4Q7Z3J3 1758 aa20.34■□□□□ 0.85
SPG7-218ENST00000568205 LY75O60449 1722 aa20.34■□□□□ 0.85
SPG7-218ENST00000568205 EXOSC9Q06265 439 aaKnown RBP20.34■□□□□ 0.85
SPG7-218ENST00000568205 C8orf58Q8NAV2 365 aa20.34■□□□□ 0.85
SPG7-218ENST00000568205 PRAMEF22A3QJZ6 481 aa20.33■□□□□ 0.85
SPG7-218ENST00000568205 TEX13AQ9BXU3 409 aaPredicted RBP20.33■□□□□ 0.85
SPG7-218ENST00000568205 HOXB7P09629 217 aa20.32■□□□□ 0.84
SPG7-218ENST00000568205 LINC00116Q8NCU8 138 aa20.32■□□□□ 0.84
SPG7-218ENST00000568205 ELL2O00472 640 aaPredicted RBP20.31■□□□□ 0.84
SPG7-218ENST00000568205 TSPYL6Q8N831 410 aa20.31■□□□□ 0.84
SPG7-218ENST00000568205 USP16Q9Y5T5 823 aa20.31■□□□□ 0.84
SPG7-218ENST00000568205 ZNF831Q5JPB2 1677 aa20.31■□□□□ 0.84
SPG7-218ENST00000568205 SOS1Q07889 1333 aaPredicted RBP20.3■□□□□ 0.84
SPG7-218ENST00000568205 STARD3NLO95772 234 aa20.3■□□□□ 0.84
SPG7-218ENST00000568205 CYP19A1P11511 503 aaPredicted RBP20.3■□□□□ 0.84
SPG7-218ENST00000568205 HMGB2P26583 209 aaKnown RBP20.3■□□□□ 0.84
SPG7-218ENST00000568205 TWISTNBQ3B726 338 aaPredicted RBP20.3■□□□□ 0.84
SPG7-218ENST00000568205 CICQ96RK0 1608 aaPredicted RBP20.3■□□□□ 0.84
SPG7-218ENST00000568205 TJP1Q07157 1748 aa20.29■□□□□ 0.84
SPG7-218ENST00000568205 CNTNAP4Q9C0A0 1308 aa20.27■□□□□ 0.84
SPG7-218ENST00000568205 SOCS7O14512 581 aa20.27■□□□□ 0.84
SPG7-218ENST00000568205 EIF2S2P20042 333 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 1303.4 ms