RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 GNAT3A8MTJ3 354 aa22.86■■□□□ 1.25
COMMD4-220ENST00000567720 KCPQ6ZWJ8 1503 aa22.86■■□□□ 1.25
COMMD4-220ENST00000567720 CABP4P57796 275 aa22.85■■□□□ 1.25
COMMD4-220ENST00000567720 ANO8Q9HCE9 1232 aaPredicted RBP22.85■■□□□ 1.25
COMMD4-220ENST00000567720 LRRC4BQ9NT99 713 aa22.85■■□□□ 1.25
COMMD4-220ENST00000567720 ADAMTS8Q9UP79 889 aa22.85■■□□□ 1.25
COMMD4-220ENST00000567720 UBR3Q6ZT12 1888 aa22.84■■□□□ 1.25
COMMD4-220ENST00000567720 CCDC146Q8IYE0 955 aa22.84■■□□□ 1.25
COMMD4-220ENST00000567720 SLC52A2Q9HAB3 445 aa22.84■■□□□ 1.25
COMMD4-220ENST00000567720 MRS2Q9HD23 443 aa22.84■■□□□ 1.25
COMMD4-220ENST00000567720 ASAP1Q9ULH1 1129 aa22.84■■□□□ 1.25
COMMD4-220ENST00000567720 IL17REQ8NFR9 667 aa22.83■■□□□ 1.25
COMMD4-220ENST00000567720 NEFMP07197 916 aa22.82■■□□□ 1.24
COMMD4-220ENST00000567720 KCNQ4P56696 695 aa22.82■■□□□ 1.24
COMMD4-220ENST00000567720 NFE2L2Q16236 605 aa22.82■■□□□ 1.24
COMMD4-220ENST00000567720 NFATC2IPQ8NCF5 419 aa22.82■■□□□ 1.24
COMMD4-220ENST00000567720 PNNQ9H307 717 aaKnown RBP22.82■■□□□ 1.24
COMMD4-220ENST00000567720 ATG3Q9NT62 314 aa22.82■■□□□ 1.24
COMMD4-220ENST00000567720 SLC27A3Q5K4L6 730 aa22.81■■□□□ 1.24
COMMD4-220ENST00000567720 SMARCC1Q92922 1105 aaPredicted RBP22.81■■□□□ 1.24
COMMD4-220ENST00000567720 CCNL1Q9UK58 526 aaPredicted RBP22.81■■□□□ 1.24
COMMD4-220ENST00000567720 MCM10Q7L590 875 aa22.79■■□□□ 1.24
COMMD4-220ENST00000567720 MYH14Q7Z406 1995 aaKnown RBP22.78■■□□□ 1.24
COMMD4-220ENST00000567720 DCTN1Q14203 1278 aa22.78■■□□□ 1.24
COMMD4-220ENST00000567720 PNISRQ8TF01 805 aaKnown RBP22.78■■□□□ 1.24
COMMD4-220ENST00000567720 RUNDC1Q96C34 613 aa22.78■■□□□ 1.24
COMMD4-220ENST00000567720 LAMB4A4D0S4 1761 aa22.77■■□□□ 1.24
COMMD4-220ENST00000567720 PSDA5PKW4 1024 aaPredicted RBP22.77■■□□□ 1.24
COMMD4-220ENST00000567720 ZNF827Q17R98 1081 aa22.77■■□□□ 1.24
COMMD4-220ENST00000567720 LOC102724428A0A0B4J2F2 783 aa22.76■■□□□ 1.23
COMMD4-220ENST00000567720 HTATSF1O43719 755 aaKnown RBP22.76■■□□□ 1.23
COMMD4-220ENST00000567720 SIK1P57059 783 aa22.76■■□□□ 1.23
COMMD4-220ENST00000567720 TEFQ10587 303 aa22.76■■□□□ 1.23
COMMD4-220ENST00000567720 R3HDM1Q15032 1099 aaKnown RBP22.76■■□□□ 1.23
COMMD4-220ENST00000567720 RTF1Q92541 710 aaKnown RBP22.76■■□□□ 1.23
COMMD4-220ENST00000567720 C4AP0C0L4 1744 aa22.75■■□□□ 1.23
COMMD4-220ENST00000567720 TMPOP42166 694 aaKnown RBP22.75■■□□□ 1.23
COMMD4-220ENST00000567720 SLC4A9Q96Q91 983 aa22.75■■□□□ 1.23
COMMD4-220ENST00000567720 RRP7AQ9Y3A4 280 aaKnown RBP22.75■■□□□ 1.23
COMMD4-220ENST00000567720 SLC39A6Q13433 755 aa22.74■■□□□ 1.23
COMMD4-220ENST00000567720 NBPF14Q5TI25 921 aa22.74■■□□□ 1.23
COMMD4-220ENST00000567720 LRP5O75197 1615 aa22.74■■□□□ 1.23
COMMD4-220ENST00000567720 ITPK1Q13572 414 aa22.73■■□□□ 1.23
COMMD4-220ENST00000567720 DIEXFQ68CQ4 756 aaKnown RBP22.73■■□□□ 1.23
COMMD4-220ENST00000567720 THUMPD2Q9BTF0 503 aaKnown RBP22.73■■□□□ 1.23
COMMD4-220ENST00000567720 AKT1S1Q96B36 256 aa22.72■■□□□ 1.23
COMMD4-220ENST00000567720 STK32BQ9NY57 414 aa22.72■■□□□ 1.23
COMMD4-220ENST00000567720 SRCAPQ6ZRS2 3230 aa22.72■■□□□ 1.23
COMMD4-220ENST00000567720 PTCD1O75127 700 aaKnown RBP22.71■■□□□ 1.23
COMMD4-220ENST00000567720 RIPK4P57078 832 aa22.71■■□□□ 1.23
COMMD4-220ENST00000567720 SLC15A2Q16348 729 aa22.71■■□□□ 1.23
COMMD4-220ENST00000567720 LINC00116Q8NCU8 138 aa22.71■■□□□ 1.23
COMMD4-220ENST00000567720 RBM42Q9BTD8 480 aaKnown RBP22.71■■□□□ 1.23
COMMD4-220ENST00000567720 COL24A1Q17RW2 1714 aa22.71■■□□□ 1.23
COMMD4-220ENST00000567720 ATP6V1AP38606 617 aa22.69■■□□□ 1.22
COMMD4-220ENST00000567720 APAF1O14727 1248 aa22.68■■□□□ 1.22
COMMD4-220ENST00000567720 NEUROD2Q15784 382 aa22.68■■□□□ 1.22
COMMD4-220ENST00000567720 TRIM35Q9UPQ4 493 aa22.68■■□□□ 1.22
COMMD4-220ENST00000567720 LMOD3Q0VAK6 560 aa22.67■■□□□ 1.22
COMMD4-220ENST00000567720 ZNF790Q6PG37 636 aa22.67■■□□□ 1.22
COMMD4-220ENST00000567720 BTBD11A6QL63 1104 aa22.66■■□□□ 1.22
COMMD4-220ENST00000567720 KCNQ3O43525 872 aa22.66■■□□□ 1.22
COMMD4-220ENST00000567720 TTC5Q8N0Z6 440 aa22.66■■□□□ 1.22
COMMD4-220ENST00000567720 PDGFDQ9GZP0 370 aaPredicted RBP22.66■■□□□ 1.22
COMMD4-220ENST00000567720 PNPLA7Q6ZV29 1317 aa22.65■■□□□ 1.22
COMMD4-220ENST00000567720 ZNF496Q96IT1 587 aaPredicted RBP22.65■■□□□ 1.22
COMMD4-220ENST00000567720 HEG1Q9ULI3 1381 aa22.64■■□□□ 1.22
COMMD4-220ENST00000567720 CCER2I3L3R5 266 aa22.64■■□□□ 1.21
COMMD4-220ENST00000567720 AMIGO3Q86WK7 504 aa22.64■■□□□ 1.21
COMMD4-220ENST00000567720 FAM9BQ8IZU0 186 aa22.64■■□□□ 1.21
COMMD4-220ENST00000567720 CNTNAP4Q9C0A0 1308 aa22.63■■□□□ 1.21
COMMD4-220ENST00000567720 TAF7Q15545 349 aaPredicted RBP22.63■■□□□ 1.21
COMMD4-220ENST00000567720 SENP3-EIF4A1A0A087X0R7 540 aa22.62■■□□□ 1.21
COMMD4-220ENST00000567720 DNAJC10Q8IXB1 793 aa22.62■■□□□ 1.21
COMMD4-220ENST00000567720 AK7Q96M32 723 aa22.62■■□□□ 1.21
COMMD4-220ENST00000567720 TFCP2L1Q9NZI6 479 aa22.62■■□□□ 1.21
COMMD4-220ENST00000567720 MIS18AQ9NYP9 233 aa22.61■■□□□ 1.21
COMMD4-220ENST00000567720 VSIG10Q8N0Z9 540 aa22.6■■□□□ 1.21
COMMD4-220ENST00000567720 MIER1Q8N108 512 aa22.6■■□□□ 1.21
COMMD4-220ENST00000567720 FMNL2Q96PY5 1086 aa22.6■■□□□ 1.21
COMMD4-220ENST00000567720 SCN7AQ01118 1682 aa22.6■■□□□ 1.21
COMMD4-220ENST00000567720 GNPATO15228 680 aa22.59■■□□□ 1.21
COMMD4-220ENST00000567720 SMIM5Q71RC9 77 aa22.59■■□□□ 1.21
COMMD4-220ENST00000567720 BCORQ6W2J9 1755 aa22.58■■□□□ 1.21
COMMD4-220ENST00000567720 HMGB2P26583 209 aaKnown RBP22.58■■□□□ 1.21
COMMD4-220ENST00000567720 CRKLP46109 303 aaKnown RBP22.58■■□□□ 1.21
COMMD4-220ENST00000567720 PHF14O94880 888 aa22.56■■□□□ 1.2
COMMD4-220ENST00000567720 CYP19A1P11511 503 aaPredicted RBP22.56■■□□□ 1.2
COMMD4-220ENST00000567720 RC3H1Q5TC82 1133 aaKnown RBP22.56■■□□□ 1.2
COMMD4-220ENST00000567720 TSPYL4Q9UJ04 414 aa22.56■■□□□ 1.2
COMMD4-220ENST00000567720 PRAMEF22A3QJZ6 481 aa22.55■■□□□ 1.2
COMMD4-220ENST00000567720 SSFA2P28290 1259 aa22.55■■□□□ 1.2
COMMD4-220ENST00000567720 COL23A1Q86Y22 540 aaPredicted RBP22.55■■□□□ 1.2
COMMD4-220ENST00000567720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.54■■□□□ 1.2
COMMD4-220ENST00000567720 ZBTB7AO95365 584 aa22.54■■□□□ 1.2
COMMD4-220ENST00000567720 INTS5Q6P9B9 1019 aaKnown RBP22.54■■□□□ 1.2
COMMD4-220ENST00000567720 CCDC87Q9NVE4 849 aa22.54■■□□□ 1.2
COMMD4-220ENST00000567720 ZBTB1Q9Y2K1 713 aa22.54■■□□□ 1.2
COMMD4-220ENST00000567720 EIF4A1P60842 406 aaKnown RBP22.53■■□□□ 1.2
COMMD4-220ENST00000567720 CCDC27Q2M243 656 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms