RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 USP3Q9Y6I4 520 aa9.18□□□□□ -0.94
SHCBP1-206ENST00000567698 SPINT1O43278 529 aa9.17□□□□□ -0.94
SHCBP1-206ENST00000567698 FOXK2Q01167 660 aa9.17□□□□□ -0.94
SHCBP1-206ENST00000567698 LAPTM4AQ15012 233 aa9.17□□□□□ -0.94
SHCBP1-206ENST00000567698 MTFR1Q15390 333 aa9.17□□□□□ -0.94
SHCBP1-206ENST00000567698 OCLNQ16625 522 aa9.17□□□□□ -0.94
SHCBP1-206ENST00000567698 SWI5Q1ZZU3 235 aa9.17□□□□□ -0.94
SHCBP1-206ENST00000567698 CTC1Q2NKJ3 1217 aa9.17□□□□□ -0.94
SHCBP1-206ENST00000567698 PKDCCQ504Y2 493 aa9.17□□□□□ -0.94
SHCBP1-206ENST00000567698 PHLDB3Q6NSJ2 640 aa9.17□□□□□ -0.94
SHCBP1-206ENST00000567698 CLP1Q92989 425 aaKnown RBP9.17□□□□□ -0.94
SHCBP1-206ENST00000567698 ESYT1Q9BSJ8 1104 aa9.17□□□□□ -0.94
SHCBP1-206ENST00000567698 ST8SIA5O15466 376 aa9.16□□□□□ -0.94
SHCBP1-206ENST00000567698 LGR5O75473 907 aa9.16□□□□□ -0.94
SHCBP1-206ENST00000567698 BMP1P13497 986 aa9.16□□□□□ -0.94
SHCBP1-206ENST00000567698 FOXD4L5Q5VV16 416 aaPredicted RBP9.16□□□□□ -0.94
SHCBP1-206ENST00000567698 MRPL14Q6P1L8 145 aaKnown RBP9.16□□□□□ -0.94
SHCBP1-206ENST00000567698 CNKSR1Q969H4 720 aa9.16□□□□□ -0.94
SHCBP1-206ENST00000567698 ESF1Q9H501 851 aaKnown RBP9.16□□□□□ -0.94
SHCBP1-206ENST00000567698 AAASQ9NRG9 546 aa9.16□□□□□ -0.94
SHCBP1-206ENST00000567698 DACH1Q9UI36 760 aa9.16□□□□□ -0.94
SHCBP1-206ENST00000567698 IQSEC3Q9UPP2 1182 aaPredicted RBP9.16□□□□□ -0.94
SHCBP1-206ENST00000567698 C21orf2O43822 256 aa9.15□□□□□ -0.94
SHCBP1-206ENST00000567698 TNS4Q8IZW8 715 aa9.15□□□□□ -0.94
SHCBP1-206ENST00000567698 TSEN34Q9BSV6 310 aaKnown RBP9.15□□□□□ -0.94
SHCBP1-206ENST00000567698 IRX2Q9BZI1 471 aaPredicted RBP9.15□□□□□ -0.94
SHCBP1-206ENST00000567698 SERTAD1Q9UHV2 236 aa9.15□□□□□ -0.94
SHCBP1-206ENST00000567698 WEE1P30291 646 aa9.14□□□□□ -0.95
SHCBP1-206ENST00000567698 SMTNP53814 917 aa9.14□□□□□ -0.95
SHCBP1-206ENST00000567698 ESCO1Q5FWF5 840 aa9.14□□□□□ -0.95
SHCBP1-206ENST00000567698 INSM2Q96T92 566 aaPredicted RBP9.14□□□□□ -0.95
SHCBP1-206ENST00000567698 CTSOP43234 321 aaPredicted RBP9.13□□□□□ -0.95
SHCBP1-206ENST00000567698 CENPCQ03188 943 aa9.13□□□□□ -0.95
SHCBP1-206ENST00000567698 SCHIP1Q9P0W5 487 aaPredicted RBP9.13□□□□□ -0.95
SHCBP1-206ENST00000567698 A6NJY4 79 aa9.12□□□□□ -0.95
SHCBP1-206ENST00000567698 AXIN1O15169 862 aa9.12□□□□□ -0.95
SHCBP1-206ENST00000567698 SSFA2P28290 1259 aa9.12□□□□□ -0.95
SHCBP1-206ENST00000567698 RNF144AP50876 292 aaPredicted RBP9.12□□□□□ -0.95
SHCBP1-206ENST00000567698 GAS2L2Q8NHY3 880 aa9.12□□□□□ -0.95
SHCBP1-206ENST00000567698 PURBQ96QR8 312 aaKnown RBP9.12□□□□□ -0.95
SHCBP1-206ENST00000567698 GRIP2Q9C0E4 1043 aa9.12□□□□□ -0.95
SHCBP1-206ENST00000567698 MEN1O00255 615 aa9.11□□□□□ -0.95
SHCBP1-206ENST00000567698 BACH1O14867 736 aa9.11□□□□□ -0.95
SHCBP1-206ENST00000567698 POTEAQ6S8J7 498 aa9.11□□□□□ -0.95
SHCBP1-206ENST00000567698 TSPAN10Q9H1Z9 355 aaPredicted RBP9.11□□□□□ -0.95
SHCBP1-206ENST00000567698 GPC1P35052 558 aa9.1□□□□□ -0.95
SHCBP1-206ENST00000567698 TLR1Q15399 786 aa9.1□□□□□ -0.95
SHCBP1-206ENST00000567698 C6orf118Q5T5N4 469 aa9.1□□□□□ -0.95
SHCBP1-206ENST00000567698 RNF217Q8TC41 542 aa9.1□□□□□ -0.95
SHCBP1-206ENST00000567698 PRIMPOLQ96LW4 560 aa9.1□□□□□ -0.95
SHCBP1-206ENST00000567698 ATP13A2Q9NQ11 1180 aa9.1□□□□□ -0.95
SHCBP1-206ENST00000567698 SOS2Q07890 1332 aaPredicted RBP9.09□□□□□ -0.95
SHCBP1-206ENST00000567698 CDK2AP1O14519 115 aa9.09□□□□□ -0.95
SHCBP1-206ENST00000567698 PRMT3O60678 531 aa9.09□□□□□ -0.95
SHCBP1-206ENST00000567698 PDIA4P13667 645 aaKnown RBP9.09□□□□□ -0.95
SHCBP1-206ENST00000567698 SCNN1AP37088 669 aa9.09□□□□□ -0.95
SHCBP1-206ENST00000567698 SLC9A9Q8IVB4 645 aa9.09□□□□□ -0.95
SHCBP1-206ENST00000567698 ZFP42Q96MM3 310 aa9.09□□□□□ -0.95
SHCBP1-206ENST00000567698 CXXC1Q9P0U4 656 aaPredicted RBP9.09□□□□□ -0.95
SHCBP1-206ENST00000567698 BMP2P12643 396 aa9.08□□□□□ -0.96
SHCBP1-206ENST00000567698 ATP2B4P23634 1241 aa9.08□□□□□ -0.96
SHCBP1-206ENST00000567698 TBCELQ5QJ74 424 aa9.08□□□□□ -0.96
SHCBP1-206ENST00000567698 TAS1R3Q7RTX0 852 aa9.08□□□□□ -0.96
SHCBP1-206ENST00000567698 PPARGC1BQ86YN6 1023 aaKnown RBP9.08□□□□□ -0.96
SHCBP1-206ENST00000567698 C1orf216Q8TAB5 229 aa9.08□□□□□ -0.96
SHCBP1-206ENST00000567698 ZDHHC1Q8WTX9 485 aa9.08□□□□□ -0.96
SHCBP1-206ENST00000567698 HINFPQ9BQA5 517 aa9.08□□□□□ -0.96
SHCBP1-206ENST00000567698 RBM19Q9Y4C8 960 aaKnown RBP9.08□□□□□ -0.96
SHCBP1-206ENST00000567698 IGFBP4P22692 258 aa9.07□□□□□ -0.96
SHCBP1-206ENST00000567698 PDE4CQ08493 712 aa9.07□□□□□ -0.96
SHCBP1-206ENST00000567698 FKBP5Q13451 457 aaPredicted RBP9.07□□□□□ -0.96
SHCBP1-206ENST00000567698 NLRP3Q96P20 1036 aa9.07□□□□□ -0.96
SHCBP1-206ENST00000567698 SPATA31C2B4DYI2 1134 aa9.06□□□□□ -0.96
SHCBP1-206ENST00000567698 BRD1O95696 1058 aa9.06□□□□□ -0.96
SHCBP1-206ENST00000567698 SH3PXD2AQ5TCZ1 1133 aa9.06□□□□□ -0.96
SHCBP1-206ENST00000567698 CAPN12Q6ZSI9 719 aa9.06□□□□□ -0.96
SHCBP1-206ENST00000567698 SCG3Q8WXD2 468 aaKnown RBP9.06□□□□□ -0.96
SHCBP1-206ENST00000567698 POLMQ9NP87 494 aaPredicted RBP9.06□□□□□ -0.96
SHCBP1-206ENST00000567698 ATAD2Q6PL18 1390 aa9.06□□□□□ -0.96
SHCBP1-206ENST00000567698 UPP2O95045 317 aa9.05□□□□□ -0.96
SHCBP1-206ENST00000567698 ZSCAN10Q96SZ4 725 aaPredicted RBP9.05□□□□□ -0.96
SHCBP1-206ENST00000567698 DNMT3LQ9UJW3 386 aa9.05□□□□□ -0.96
SHCBP1-206ENST00000567698 TTLL8A6PVC2 850 aa9.04□□□□□ -0.96
SHCBP1-206ENST00000567698 EML1O00423 815 aa9.04□□□□□ -0.96
SHCBP1-206ENST00000567698 SCARF1Q14162 830 aa9.04□□□□□ -0.96
SHCBP1-206ENST00000567698 TEAD4Q15561 434 aa9.04□□□□□ -0.96
SHCBP1-206ENST00000567698 TXNDC2Q86VQ3 553 aa9.04□□□□□ -0.96
SHCBP1-206ENST00000567698 STAG2Q8N3U4 1231 aa9.04□□□□□ -0.96
SHCBP1-206ENST00000567698 C2orf49Q9BVC5 232 aaPredicted RBP9.04□□□□□ -0.96
SHCBP1-206ENST00000567698 HIRAP54198 1017 aaPredicted RBP9.03□□□□□ -0.96
SHCBP1-206ENST00000567698 C4orf17Q53FE4 359 aa9.03□□□□□ -0.96
SHCBP1-206ENST00000567698 RHBDD1Q8TEB9 315 aa9.03□□□□□ -0.96
SHCBP1-206ENST00000567698 FOXO3O43524 673 aa9.02□□□□□ -0.97
SHCBP1-206ENST00000567698 PSMA6P60900 246 aaKnown RBP9.02□□□□□ -0.97
SHCBP1-206ENST00000567698 FIGNL2A6NMB9 653 aa9.01□□□□□ -0.97
SHCBP1-206ENST00000567698 PPP1R12BO60237 982 aaPredicted RBP9.01□□□□□ -0.97
SHCBP1-206ENST00000567698 POU4F2Q12837 409 aa9.01□□□□□ -0.97
SHCBP1-206ENST00000567698 NBPF10Q6P3W6 841 aaKnown RBP9.01□□□□□ -0.97
SHCBP1-206ENST00000567698 NBPF15Q8N660 670 aa9.01□□□□□ -0.97
SHCBP1-206ENST00000567698 C7orf43Q8WVR3 580 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms