RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 MFAP1P55081 439 aaKnown RBP22.13■■□□□ 1.13
CMTM3-214ENST00000567572 PLEKHO1Q53GL0 409 aaPredicted RBP22.13■■□□□ 1.13
CMTM3-214ENST00000567572 SOS2Q07890 1332 aaPredicted RBP22.13■■□□□ 1.13
CMTM3-214ENST00000567572 RGS12O14924 1447 aa22.13■■□□□ 1.13
CMTM3-214ENST00000567572 TAF7Q15545 349 aaPredicted RBP22.12■■□□□ 1.13
CMTM3-214ENST00000567572 CABLES1Q8TDN4 633 aa22.12■■□□□ 1.13
CMTM3-214ENST00000567572 INTS3Q68E01 1043 aaKnown RBP22.12■■□□□ 1.13
CMTM3-214ENST00000567572 LNPKQ9C0E8 428 aa22.12■■□□□ 1.13
CMTM3-214ENST00000567572 PTPRCP08575 1304 aa22.11■■□□□ 1.13
CMTM3-214ENST00000567572 AKAP4Q5JQC9 854 aa22.11■■□□□ 1.13
CMTM3-214ENST00000567572 OVOS2A0A0G2JMS6 1433 aa22.1■■□□□ 1.13
CMTM3-214ENST00000567572 SOS1Q07889 1333 aaPredicted RBP22.1■■□□□ 1.13
CMTM3-214ENST00000567572 ZNF530Q6P9A1 599 aaPredicted RBP22.1■■□□□ 1.13
CMTM3-214ENST00000567572 KDM3BQ7LBC6 1761 aa22.09■■□□□ 1.13
CMTM3-214ENST00000567572 NHSL1Q5SYE7 1610 aa22.09■■□□□ 1.13
CMTM3-214ENST00000567572 SNX21Q969T3 373 aa22.09■■□□□ 1.13
CMTM3-214ENST00000567572 ADAMTS7Q9UKP4 1686 aa22.08■■□□□ 1.13
CMTM3-214ENST00000567572 ANKRD45Q5TZF3 282 aa22.08■■□□□ 1.12
CMTM3-214ENST00000567572 SLKQ9H2G2 1235 aaPredicted RBP22.08■■□□□ 1.12
CMTM3-214ENST00000567572 HSCBQ8IWL3 235 aa22.07■■□□□ 1.12
CMTM3-214ENST00000567572 ABCA3Q99758 1704 aa22.07■■□□□ 1.12
CMTM3-214ENST00000567572 LGR6Q9HBX8 967 aa22.07■■□□□ 1.12
CMTM3-214ENST00000567572 SIRT2Q8IXJ6 389 aa22.06■■□□□ 1.12
CMTM3-214ENST00000567572 PLEKHG2Q9H7P9 1386 aa22.06■■□□□ 1.12
CMTM3-214ENST00000567572 CHMP5Q9NZZ3 219 aa22.06■■□□□ 1.12
CMTM3-214ENST00000567572 SLC4A2P04920 1241 aa22.05■■□□□ 1.12
CMTM3-214ENST00000567572 C1orf141Q5JVX7 400 aa22.04■■□□□ 1.12
CMTM3-214ENST00000567572 RPAP2Q8IXW5 612 aaPredicted RBP22.04■■□□□ 1.12
CMTM3-214ENST00000567572 CHRNA2Q15822 529 aa22.04■■□□□ 1.12
CMTM3-214ENST00000567572 DCTPP1Q9H773 170 aa22.04■■□□□ 1.12
CMTM3-214ENST00000567572 NLRP2Q9NX02 1062 aa22.04■■□□□ 1.12
CMTM3-214ENST00000567572 ATP10DQ9P241 1426 aa22.03■■□□□ 1.12
CMTM3-214ENST00000567572 SIPA1L3O60292 1781 aaPredicted RBP22.03■■□□□ 1.12
CMTM3-214ENST00000567572 MEGF6O75095 1541 aa22.02■■□□□ 1.12
CMTM3-214ENST00000567572 RNMTO43148 476 aaKnown RBP22.02■■□□□ 1.12
CMTM3-214ENST00000567572 MPRIPQ6WCQ1 1025 aa22.02■■□□□ 1.12
CMTM3-214ENST00000567572 ANKRD44Q8N8A2 993 aa22.02■■□□□ 1.11
CMTM3-214ENST00000567572 C1orf115Q9H7X2 142 aa22.02■■□□□ 1.11
CMTM3-214ENST00000567572 CACNA1FO60840 1977 aa22.01■■□□□ 1.11
CMTM3-214ENST00000567572 CCDC30Q5VVM6 783 aa22.01■■□□□ 1.11
CMTM3-214ENST00000567572 RAPGEF4Q8WZA2 1011 aa22.01■■□□□ 1.11
CMTM3-214ENST00000567572 TEFQ10587 303 aa22■■□□□ 1.11
CMTM3-214ENST00000567572 STK31Q9BXU1 1019 aa22■■□□□ 1.11
CMTM3-214ENST00000567572 PKD1L3Q7Z443 1732 aa22■■□□□ 1.11
CMTM3-214ENST00000567572 CDC45O75419 566 aa22■■□□□ 1.11
CMTM3-214ENST00000567572 G2E3Q7L622 706 aa22■■□□□ 1.11
CMTM3-214ENST00000567572 CSB-PGBD3P0DP91 1061 aa21.99■■□□□ 1.11
CMTM3-214ENST00000567572 EIF4A1P60842 406 aaKnown RBP21.99■■□□□ 1.11
CMTM3-214ENST00000567572 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.99■■□□□ 1.11
CMTM3-214ENST00000567572 CIZ1Q9ULV3 898 aaPredicted RBP21.99■■□□□ 1.11
CMTM3-214ENST00000567572 HOXB7P09629 217 aa21.98■■□□□ 1.11
CMTM3-214ENST00000567572 TATP17735 454 aaPredicted RBP21.98■■□□□ 1.11
CMTM3-214ENST00000567572 SCN11AQ9UI33 1791 aa21.97■■□□□ 1.11
CMTM3-214ENST00000567572 TBC1D9Q6ZT07 1266 aa21.97■■□□□ 1.11
CMTM3-214ENST00000567572 BTBD11A6QL63 1104 aa21.96■■□□□ 1.11
CMTM3-214ENST00000567572 PRDM11Q9NQV5 511 aa21.96■■□□□ 1.11
CMTM3-214ENST00000567572 N4BP2Q86UW6 1770 aaPredicted RBP21.96■■□□□ 1.11
CMTM3-214ENST00000567572 DDIT3P35638 169 aa21.96■■□□□ 1.11
CMTM3-214ENST00000567572 COL5A2P05997 1499 aaPredicted RBP21.95■■□□□ 1.1
CMTM3-214ENST00000567572 KDM6AO15550 1401 aaPredicted RBP21.95■■□□□ 1.1
CMTM3-214ENST00000567572 PRKCSHP14314 528 aaPredicted RBP21.95■■□□□ 1.1
CMTM3-214ENST00000567572 SPG7Q9UQ90 795 aa21.95■■□□□ 1.1
CMTM3-214ENST00000567572 KCNQ3O43525 872 aa21.94■■□□□ 1.1
CMTM3-214ENST00000567572 MCM4P33991 863 aa21.94■■□□□ 1.1
CMTM3-214ENST00000567572 FLIIQ13045 1269 aa21.94■■□□□ 1.1
CMTM3-214ENST00000567572 HDGFL1Q5TGJ6 251 aa21.94■■□□□ 1.1
CMTM3-214ENST00000567572 CEP85Q6P2H3 762 aa21.94■■□□□ 1.1
CMTM3-214ENST00000567572 WDR17Q8IZU2 1322 aa21.94■■□□□ 1.1
CMTM3-214ENST00000567572 CCT4P50991 539 aaKnown RBP21.94■■□□□ 1.1
CMTM3-214ENST00000567572 PLEKHM2Q8IWE5 1019 aa21.94■■□□□ 1.1
CMTM3-214ENST00000567572 HEG1Q9ULI3 1381 aa21.93■■□□□ 1.1
CMTM3-214ENST00000567572 HMMRO75330 724 aa21.93■■□□□ 1.1
CMTM3-214ENST00000567572 PHKG2P15735 406 aa21.93■■□□□ 1.1
CMTM3-214ENST00000567572 PARP4Q9UKK3 1724 aaKnown RBP21.93■■□□□ 1.1
CMTM3-214ENST00000567572 L1TD1Q5T7N2 865 aaKnown RBP21.92■■□□□ 1.1
CMTM3-214ENST00000567572 TTC22Q5TAA0 569 aa21.92■■□□□ 1.1
CMTM3-214ENST00000567572 NECTIN2Q92692 538 aa21.92■■□□□ 1.1
CMTM3-214ENST00000567572 PXDNLA1KZ92 1463 aa21.92■■□□□ 1.1
CMTM3-214ENST00000567572 LTBP4Q8N2S1 1624 aa21.92■■□□□ 1.1
CMTM3-214ENST00000567572 DDX11L8A8MPP1 907 aa21.92■■□□□ 1.1
CMTM3-214ENST00000567572 MRC1P22897 1456 aa21.92■■□□□ 1.1
CMTM3-214ENST00000567572 F6X3S4 739 aa21.91■■□□□ 1.1
CMTM3-214ENST00000567572 CHMP4AQ9BY43 222 aa21.91■■□□□ 1.1
CMTM3-214ENST00000567572 ROBO1Q9Y6N7 1651 aa21.91■■□□□ 1.1
CMTM3-214ENST00000567572 KIF2CQ99661 725 aa21.9■■□□□ 1.1
CMTM3-214ENST00000567572 GSPT1P15170 499 aaKnown RBP21.9■■□□□ 1.1
CMTM3-214ENST00000567572 IFNL2Q8IZJ0 200 aa21.9■■□□□ 1.1
CMTM3-214ENST00000567572 AHDC1Q5TGY3 1603 aaPredicted RBP21.89■■□□□ 1.1
CMTM3-214ENST00000567572 PTMSP20962 102 aa21.89■■□□□ 1.09
CMTM3-214ENST00000567572 FKBP5Q13451 457 aaPredicted RBP21.89■■□□□ 1.09
CMTM3-214ENST00000567572 MEIS3Q99687 375 aa21.89■■□□□ 1.09
CMTM3-214ENST00000567572 CYP27B1O15528 508 aa21.88■■□□□ 1.09
CMTM3-214ENST00000567572 HSP90AB1P08238 724 aaKnown RBP21.88■■□□□ 1.09
CMTM3-214ENST00000567572 SLC4A10Q6U841 1118 aa21.88■■□□□ 1.09
CMTM3-214ENST00000567572 SLC52A2Q9HAB3 445 aa21.88■■□□□ 1.09
CMTM3-214ENST00000567572 CASC1Q6TDU7 716 aa21.87■■□□□ 1.09
CMTM3-214ENST00000567572 K7ELQ4 463 aaPredicted RBP21.86■■□□□ 1.09
CMTM3-214ENST00000567572 GIGYF1O75420 1035 aaPredicted RBP21.86■■□□□ 1.09
CMTM3-214ENST00000567572 EIF2S2P20042 333 aaKnown RBP21.86■■□□□ 1.09
CMTM3-214ENST00000567572 IL27Q8NEV9 243 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms