RNA–Protein interactions for RNA: ENST00000567264.1

UBFD1-208, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBFD1, Length 642 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-208ENST00000567264 HNRNPUQ00839 825 aaKnown RBP eCLIP29.7■■■□□ 2.35
UBFD1-208ENST00000567264 SF3B2Q13435 895 aaKnown RBP29.7■■■□□ 2.35
UBFD1-208ENST00000567264 WWC1Q8IX03 1113 aa29.7■■■□□ 2.35
UBFD1-208ENST00000567264 TAF7Q15545 349 aaPredicted RBP29.68■■■□□ 2.34
UBFD1-208ENST00000567264 BTAF1O14981 1849 aa29.68■■■□□ 2.34
UBFD1-208ENST00000567264 SIPA1L3O60292 1781 aaPredicted RBP29.67■■■□□ 2.34
UBFD1-208ENST00000567264 CCDC125Q86Z20 511 aa29.66■■■□□ 2.34
UBFD1-208ENST00000567264 TNS1Q9HBL0 1735 aaKnown RBP29.65■■■□□ 2.34
UBFD1-208ENST00000567264 BTBD11A6QL63 1104 aa29.65■■■□□ 2.34
UBFD1-208ENST00000567264 APBA3O96018 575 aa29.65■■■□□ 2.34
UBFD1-208ENST00000567264 SMARCC1Q92922 1105 aaPredicted RBP29.64■■■□□ 2.34
UBFD1-208ENST00000567264 WDR63Q8IWG1 891 aa29.63■■■□□ 2.33
UBFD1-208ENST00000567264 LAS1LQ9Y4W2 734 aaKnown RBP29.63■■■□□ 2.33
UBFD1-208ENST00000567264 ATG3Q9NT62 314 aa29.62■■■□□ 2.33
UBFD1-208ENST00000567264 ASAP1Q9ULH1 1129 aa29.62■■■□□ 2.33
UBFD1-208ENST00000567264 EP400Q96L91 3159 aa29.61■■■□□ 2.33
UBFD1-208ENST00000567264 TTC5Q8N0Z6 440 aa29.61■■■□□ 2.33
UBFD1-208ENST00000567264 UPF1Q92900 1129 aaKnown RBP eCLIP29.61■■■□□ 2.33
UBFD1-208ENST00000567264 BABAM1Q9NWV8 329 aa29.61■■■□□ 2.33
UBFD1-208ENST00000567264 GNAI1P63096 354 aa29.6■■■□□ 2.33
UBFD1-208ENST00000567264 SLC39A6Q13433 755 aa29.6■■■□□ 2.33
UBFD1-208ENST00000567264 IFT57Q9NWB7 429 aa29.6■■■□□ 2.33
UBFD1-208ENST00000567264 TSPYL4Q9UJ04 414 aa29.6■■■□□ 2.33
UBFD1-208ENST00000567264 PALLDQ8WX93 1383 aa29.6■■■□□ 2.33
UBFD1-208ENST00000567264 BAG6P46379 1132 aa29.59■■■□□ 2.33
UBFD1-208ENST00000567264 CFAP44Q96MT7 982 aa29.59■■■□□ 2.33
UBFD1-208ENST00000567264 MIS18AQ9NYP9 233 aa29.59■■■□□ 2.33
UBFD1-208ENST00000567264 IL16Q14005 1332 aa29.59■■■□□ 2.33
UBFD1-208ENST00000567264 ZNF521Q96K83 1311 aa29.59■■■□□ 2.33
UBFD1-208ENST00000567264 PAPPAQ13219 1627 aa29.58■■■□□ 2.33
UBFD1-208ENST00000567264 ZNF790Q6PG37 636 aa29.58■■■□□ 2.33
UBFD1-208ENST00000567264 PLSCR1O15162 318 aa29.57■■■□□ 2.32
UBFD1-208ENST00000567264 CHL1O00533 1208 aa29.56■■■□□ 2.32
UBFD1-208ENST00000567264 KDM3BQ7LBC6 1761 aa29.54■■■□□ 2.32
UBFD1-208ENST00000567264 PTCD1O75127 700 aaKnown RBP29.54■■■□□ 2.32
UBFD1-208ENST00000567264 ZNF853P0CG23 659 aa29.54■■■□□ 2.32
UBFD1-208ENST00000567264 GOLGA2Q08379 1002 aa29.54■■■□□ 2.32
UBFD1-208ENST00000567264 RBM42Q9BTD8 480 aaKnown RBP29.54■■■□□ 2.32
UBFD1-208ENST00000567264 ZBED9Q6R2W3 1325 aa29.53■■■□□ 2.32
UBFD1-208ENST00000567264 KCNQ3O43525 872 aa29.53■■■□□ 2.32
UBFD1-208ENST00000567264 EN1Q05925 392 aaPredicted RBP29.52■■■□□ 2.32
UBFD1-208ENST00000567264 YTHDC1Q96MU7 727 aaKnown RBP29.52■■■□□ 2.32
UBFD1-208ENST00000567264 DEFB132Q7Z7B7 95 aa29.51■■■□□ 2.31
UBFD1-208ENST00000567264 FMNL2Q96PY5 1086 aa29.51■■■□□ 2.31
UBFD1-208ENST00000567264 MYH16Q9H6N6 1097 aa29.51■■■□□ 2.31
UBFD1-208ENST00000567264 MBIPQ9NS73 344 aa29.51■■■□□ 2.31
UBFD1-208ENST00000567264 RGPD3A6NKT7 1758 aaPredicted RBP29.51■■■□□ 2.31
UBFD1-208ENST00000567264 RGPD4Q7Z3J3 1758 aa29.51■■■□□ 2.31
UBFD1-208ENST00000567264 KCPQ6ZWJ8 1503 aa29.5■■■□□ 2.31
UBFD1-208ENST00000567264 UBR2Q8IWV8 1755 aa29.5■■■□□ 2.31
UBFD1-208ENST00000567264 LOC102724428A0A0B4J2F2 783 aa29.5■■■□□ 2.31
UBFD1-208ENST00000567264 SIK1P57059 783 aa29.5■■■□□ 2.31
UBFD1-208ENST00000567264 ZNF496Q96IT1 587 aaPredicted RBP29.5■■■□□ 2.31
UBFD1-208ENST00000567264 LY75O60449 1722 aa29.5■■■□□ 2.31
UBFD1-208ENST00000567264 CCNL1Q9UK58 526 aaPredicted RBP29.49■■■□□ 2.31
UBFD1-208ENST00000567264 E9PSI1 815 aa29.48■■■□□ 2.31
UBFD1-208ENST00000567264 TXNRD1Q16881 649 aa29.48■■■□□ 2.31
UBFD1-208ENST00000567264 CAMKK2Q96RR4 588 aa29.48■■■□□ 2.31
UBFD1-208ENST00000567264 ATP6V1AP38606 617 aa29.47■■■□□ 2.31
UBFD1-208ENST00000567264 EIF4A1P60842 406 aaKnown RBP29.47■■■□□ 2.31
UBFD1-208ENST00000567264 EZH2Q15910 746 aaKnown RBP29.47■■■□□ 2.31
UBFD1-208ENST00000567264 SLC27A3Q5K4L6 730 aa29.47■■■□□ 2.31
UBFD1-208ENST00000567264 TSR2Q969E8 191 aaKnown RBP29.47■■■□□ 2.31
UBFD1-208ENST00000567264 SPINK5Q9NQ38 1064 aaPredicted RBP29.47■■■□□ 2.31
UBFD1-208ENST00000567264 HEG1Q9ULI3 1381 aa29.47■■■□□ 2.31
UBFD1-208ENST00000567264 FANCIQ9NVI1 1328 aa29.45■■■□□ 2.31
UBFD1-208ENST00000567264 VSIG10Q8N0Z9 540 aa29.45■■■□□ 2.31
UBFD1-208ENST00000567264 SLFN5Q08AF3 891 aa29.43■■■□□ 2.3
UBFD1-208ENST00000567264 PROM2Q8N271 834 aa29.43■■■□□ 2.3
UBFD1-208ENST00000567264 CDCA7LQ96GN5 454 aa29.43■■■□□ 2.3
UBFD1-208ENST00000567264 SLC4A9Q96Q91 983 aa29.43■■■□□ 2.3
UBFD1-208ENST00000567264 ZNF831Q5JPB2 1677 aa29.42■■■□□ 2.3
UBFD1-208ENST00000567264 SNRPA1P09661 255 aaKnown RBP29.42■■■□□ 2.3
UBFD1-208ENST00000567264 HMGB2P26583 209 aaKnown RBP29.42■■■□□ 2.3
UBFD1-208ENST00000567264 KCNQ4P56696 695 aa29.42■■■□□ 2.3
UBFD1-208ENST00000567264 TEX13AQ9BXU3 409 aaPredicted RBP29.41■■■□□ 2.3
UBFD1-208ENST00000567264 ITPK1Q13572 414 aa29.4■■■□□ 2.3
UBFD1-208ENST00000567264 DNAJC10Q8IXB1 793 aa29.4■■■□□ 2.3
UBFD1-208ENST00000567264 LRRC4BQ9NT99 713 aa29.4■■■□□ 2.3
UBFD1-208ENST00000567264 SOCS7O14512 581 aa29.39■■■□□ 2.3
UBFD1-208ENST00000567264 RREB1Q92766 1687 aa29.38■■■□□ 2.29
UBFD1-208ENST00000567264 TJP1Q07157 1748 aa29.38■■■□□ 2.29
UBFD1-208ENST00000567264 GIGYF1O75420 1035 aaPredicted RBP29.38■■■□□ 2.29
UBFD1-208ENST00000567264 KRT24Q2M2I5 525 aa29.38■■■□□ 2.29
UBFD1-208ENST00000567264 CICQ96RK0 1608 aaPredicted RBP29.38■■■□□ 2.29
UBFD1-208ENST00000567264 C5P01031 1676 aa29.35■■■□□ 2.29
UBFD1-208ENST00000567264 STARD3NLO95772 234 aa29.35■■■□□ 2.29
UBFD1-208ENST00000567264 EXOSC9Q06265 439 aaKnown RBP29.35■■■□□ 2.29
UBFD1-208ENST00000567264 DUSP27Q5VZP5 1158 aa29.35■■■□□ 2.29
UBFD1-208ENST00000567264 TRMT2AQ8IZ69 625 aaKnown RBP29.35■■■□□ 2.29
UBFD1-208ENST00000567264 C8orf58Q8NAV2 365 aa29.35■■■□□ 2.29
UBFD1-208ENST00000567264 LINC00116Q8NCU8 138 aa29.35■■■□□ 2.29
UBFD1-208ENST00000567264 PRAMEF22A3QJZ6 481 aa29.34■■■□□ 2.29
UBFD1-208ENST00000567264 HOXB7P09629 217 aa29.34■■■□□ 2.29
UBFD1-208ENST00000567264 TAF1LQ8IZX4 1826 aa29.34■■■□□ 2.29
UBFD1-208ENST00000567264 ELL2O00472 640 aaPredicted RBP29.33■■■□□ 2.29
UBFD1-208ENST00000567264 COL5A3P25940 1745 aaPredicted RBP29.32■■■□□ 2.28
UBFD1-208ENST00000567264 NUP188Q5SRE5 1749 aa29.32■■■□□ 2.28
UBFD1-208ENST00000567264 SOS1Q07889 1333 aaPredicted RBP29.32■■■□□ 2.28
UBFD1-208ENST00000567264 USP16Q9Y5T5 823 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms