RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 MRC1P22897 1456 aa17.18■□□□□ 0.34
CNEP1R1-208ENST00000566482 LOC102724428A0A0B4J2F2 783 aa17.18■□□□□ 0.34
CNEP1R1-208ENST00000566482 SIK1P57059 783 aa17.18■□□□□ 0.34
CNEP1R1-208ENST00000566482 NFATC2IPQ8NCF5 419 aa17.18■□□□□ 0.34
CNEP1R1-208ENST00000566482 VIRMAQ69YN4 1812 aaKnown RBP17.18■□□□□ 0.34
CNEP1R1-208ENST00000566482 SRCAPQ6ZRS2 3230 aa17.17■□□□□ 0.34
CNEP1R1-208ENST00000566482 TAF1LQ8IZX4 1826 aa17.17■□□□□ 0.34
CNEP1R1-208ENST00000566482 GNAT3A8MTJ3 354 aa17.17■□□□□ 0.34
CNEP1R1-208ENST00000566482 SLC52A2Q9HAB3 445 aa17.17■□□□□ 0.34
CNEP1R1-208ENST00000566482 TUBGCP6Q96RT7 1819 aa17.17■□□□□ 0.34
CNEP1R1-208ENST00000566482 QSER1Q2KHR3 1735 aa17.16■□□□□ 0.34
CNEP1R1-208ENST00000566482 RBM42Q9BTD8 480 aaKnown RBP17.15■□□□□ 0.34
CNEP1R1-208ENST00000566482 TFCP2L1Q9NZI6 479 aa17.15■□□□□ 0.34
CNEP1R1-208ENST00000566482 C4BP0C0L5 1744 aa17.15■□□□□ 0.34
CNEP1R1-208ENST00000566482 ITPK1Q13572 414 aa17.14■□□□□ 0.33
CNEP1R1-208ENST00000566482 LINC00116Q8NCU8 138 aa17.14■□□□□ 0.33
CNEP1R1-208ENST00000566482 IL17REQ8NFR9 667 aa17.14■□□□□ 0.33
CNEP1R1-208ENST00000566482 PNPLA7Q6ZV29 1317 aa17.14■□□□□ 0.33
CNEP1R1-208ENST00000566482 ZBTB7AO95365 584 aa17.13■□□□□ 0.33
CNEP1R1-208ENST00000566482 HMGB2P26583 209 aaKnown RBP17.13■□□□□ 0.33
CNEP1R1-208ENST00000566482 ATP6V1AP38606 617 aa17.13■□□□□ 0.33
CNEP1R1-208ENST00000566482 SLC4A9Q96Q91 983 aa17.13■□□□□ 0.33
CNEP1R1-208ENST00000566482 PLEKHF1Q96S99 279 aa17.13■□□□□ 0.33
CNEP1R1-208ENST00000566482 SPON1Q9HCB6 807 aa17.13■□□□□ 0.33
CNEP1R1-208ENST00000566482 PTCD1O75127 700 aaKnown RBP17.12■□□□□ 0.33
CNEP1R1-208ENST00000566482 ZNF831Q5JPB2 1677 aa17.12■□□□□ 0.33
CNEP1R1-208ENST00000566482 CEMIPQ8WUJ3 1361 aa17.12■□□□□ 0.33
CNEP1R1-208ENST00000566482 NEFMP07197 916 aa17.11■□□□□ 0.33
CNEP1R1-208ENST00000566482 TEFQ10587 303 aa17.11■□□□□ 0.33
CNEP1R1-208ENST00000566482 SLC39A6Q13433 755 aa17.11■□□□□ 0.33
CNEP1R1-208ENST00000566482 AK7Q96M32 723 aa17.11■□□□□ 0.33
CNEP1R1-208ENST00000566482 PNNQ9H307 717 aaKnown RBP17.11■□□□□ 0.33
CNEP1R1-208ENST00000566482 ATF5Q9Y2D1 282 aaPredicted RBP17.1■□□□□ 0.33
CNEP1R1-208ENST00000566482 SIPA1L3O60292 1781 aaPredicted RBP17.1■□□□□ 0.33
CNEP1R1-208ENST00000566482 RTF1Q92541 710 aaKnown RBP17.09■□□□□ 0.33
CNEP1R1-208ENST00000566482 MTFR1LQ9H019 292 aa17.09■□□□□ 0.33
CNEP1R1-208ENST00000566482 MAPK8IP3Q9UPT6 1336 aa17.09■□□□□ 0.33
CNEP1R1-208ENST00000566482 KCPQ6ZWJ8 1503 aa17.09■□□□□ 0.33
CNEP1R1-208ENST00000566482 UBR3Q6ZT12 1888 aa17.08■□□□□ 0.33
CNEP1R1-208ENST00000566482 COL5A3P25940 1745 aaPredicted RBP17.08■□□□□ 0.32
CNEP1R1-208ENST00000566482 WDR43Q15061 677 aaKnown RBP eCLIP17.08■□□□□ 0.32
CNEP1R1-208ENST00000566482 NFE2L2Q16236 605 aa17.08■□□□□ 0.32
CNEP1R1-208ENST00000566482 MCM10Q7L590 875 aa17.08■□□□□ 0.32
CNEP1R1-208ENST00000566482 AMIGO3Q86WK7 504 aa17.08■□□□□ 0.32
CNEP1R1-208ENST00000566482 COL23A1Q86Y22 540 aaPredicted RBP17.08■□□□□ 0.32
CNEP1R1-208ENST00000566482 TJP1Q07157 1748 aa17.07■□□□□ 0.32
CNEP1R1-208ENST00000566482 CICQ96RK0 1608 aaPredicted RBP17.07■□□□□ 0.32
CNEP1R1-208ENST00000566482 HTATSF1O43719 755 aaKnown RBP17.07■□□□□ 0.32
CNEP1R1-208ENST00000566482 DCTN1Q14203 1278 aa17.07■□□□□ 0.32
CNEP1R1-208ENST00000566482 SMIM5Q71RC9 77 aa17.07■□□□□ 0.32
CNEP1R1-208ENST00000566482 SLC16A10Q8TF71 515 aa17.07■□□□□ 0.32
CNEP1R1-208ENST00000566482 DLG5Q8TDM6 1919 aa17.06■□□□□ 0.32
CNEP1R1-208ENST00000566482 GNPATO15228 680 aa17.06■□□□□ 0.32
CNEP1R1-208ENST00000566482 PHF14O94880 888 aa17.06■□□□□ 0.32
CNEP1R1-208ENST00000566482 PTGER2P43116 358 aa17.06■□□□□ 0.32
CNEP1R1-208ENST00000566482 FLAD1Q8NFF5 587 aa17.06■□□□□ 0.32
CNEP1R1-208ENST00000566482 UBR2Q8IWV8 1755 aa17.06■□□□□ 0.32
CNEP1R1-208ENST00000566482 CNTNAP4Q9C0A0 1308 aa17.05■□□□□ 0.32
CNEP1R1-208ENST00000566482 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.05■□□□□ 0.32
CNEP1R1-208ENST00000566482 ANP32CO43423 234 aa17.05■□□□□ 0.32
CNEP1R1-208ENST00000566482 RC3H1Q5TC82 1133 aaKnown RBP17.05■□□□□ 0.32
CNEP1R1-208ENST00000566482 CCDC146Q8IYE0 955 aa17.05■□□□□ 0.32
CNEP1R1-208ENST00000566482 PPP1R1BQ9UD71 204 aaPredicted RBP17.05■□□□□ 0.32
CNEP1R1-208ENST00000566482 ADAMTS8Q9UP79 889 aa17.05■□□□□ 0.32
CNEP1R1-208ENST00000566482 SSFA2P28290 1259 aa17.04■□□□□ 0.32
CNEP1R1-208ENST00000566482 ZNF790Q6PG37 636 aa17.04■□□□□ 0.32
CNEP1R1-208ENST00000566482 DNAJC10Q8IXB1 793 aa17.04■□□□□ 0.32
CNEP1R1-208ENST00000566482 TTC5Q8N0Z6 440 aa17.04■□□□□ 0.32
CNEP1R1-208ENST00000566482 SGIP1Q9BQI5 828 aa17.04■□□□□ 0.32
CNEP1R1-208ENST00000566482 BTBD11A6QL63 1104 aa17.03■□□□□ 0.32
CNEP1R1-208ENST00000566482 CRKLP46109 303 aaKnown RBP17.03■□□□□ 0.32
CNEP1R1-208ENST00000566482 CCDC184Q52MB2 194 aa17.03■□□□□ 0.32
CNEP1R1-208ENST00000566482 COL24A1Q17RW2 1714 aa17.02■□□□□ 0.32
CNEP1R1-208ENST00000566482 KCNQ3O43525 872 aa17.02■□□□□ 0.32
CNEP1R1-208ENST00000566482 ZNF496Q96IT1 587 aaPredicted RBP17.02■□□□□ 0.32
CNEP1R1-208ENST00000566482 RTCBQ9Y3I0 505 aaKnown RBP17.02■□□□□ 0.32
CNEP1R1-208ENST00000566482 MYH14Q7Z406 1995 aaKnown RBP17.02■□□□□ 0.31
CNEP1R1-208ENST00000566482 TMPOP42166 694 aaKnown RBP17.01■□□□□ 0.31
CNEP1R1-208ENST00000566482 MSL1Q68DK7 614 aa17.01■□□□□ 0.31
CNEP1R1-208ENST00000566482 VSIG10Q8N0Z9 540 aa17.01■□□□□ 0.31
CNEP1R1-208ENST00000566482 RUNDC1Q96C34 613 aa17.01■□□□□ 0.31
CNEP1R1-208ENST00000566482 HEG1Q9ULI3 1381 aa17.01■□□□□ 0.31
CNEP1R1-208ENST00000566482 RPS6KA4O75676 772 aa17■□□□□ 0.31
CNEP1R1-208ENST00000566482 CYP19A1P11511 503 aaPredicted RBP17■□□□□ 0.31
CNEP1R1-208ENST00000566482 RIPK4P57078 832 aa17■□□□□ 0.31
CNEP1R1-208ENST00000566482 TAF7Q15545 349 aaPredicted RBP17■□□□□ 0.31
CNEP1R1-208ENST00000566482 INTS5Q6P9B9 1019 aaKnown RBP17■□□□□ 0.31
CNEP1R1-208ENST00000566482 THUMPD2Q9BTF0 503 aaKnown RBP17■□□□□ 0.31
CNEP1R1-208ENST00000566482 CCDC87Q9NVE4 849 aa17■□□□□ 0.31
CNEP1R1-208ENST00000566482 FMNL2Q96PY5 1086 aa16.99■□□□□ 0.31
CNEP1R1-208ENST00000566482 RRP7AQ9Y3A4 280 aaKnown RBP16.99■□□□□ 0.31
CNEP1R1-208ENST00000566482 ADRA2BP18089 450 aa16.98■□□□□ 0.31
CNEP1R1-208ENST00000566482 POLD1P28340 1107 aa16.98■□□□□ 0.31
CNEP1R1-208ENST00000566482 TRAPPC3LQ5T215 181 aa16.98■□□□□ 0.31
CNEP1R1-208ENST00000566482 ARXQ96QS3 562 aa16.98■□□□□ 0.31
CNEP1R1-208ENST00000566482 LMOD3Q0VAK6 560 aa16.97■□□□□ 0.31
CNEP1R1-208ENST00000566482 NEUROD2Q15784 382 aa16.97■□□□□ 0.31
CNEP1R1-208ENST00000566482 ARHGEF1Q92888 912 aaKnown RBP16.97■□□□□ 0.31
CNEP1R1-208ENST00000566482 MIS18AQ9NYP9 233 aa16.97■□□□□ 0.31
CNEP1R1-208ENST00000566482 STARD3NLO95772 234 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms