RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 CAMTA1Q9Y6Y1 1673 aa16.6■□□□□ 0.25
LINC00563-201ENST00000566370 ATP10DQ9P241 1426 aa16.6■□□□□ 0.25
LINC00563-201ENST00000566370 LMTK3Q96Q04 1460 aa16.6■□□□□ 0.25
LINC00563-201ENST00000566370 SLC4A3P48751 1232 aa16.6■□□□□ 0.25
LINC00563-201ENST00000566370 HSCBQ8IWL3 235 aa16.6■□□□□ 0.25
LINC00563-201ENST00000566370 KDM3BQ7LBC6 1761 aa16.59■□□□□ 0.25
LINC00563-201ENST00000566370 PLEKHG2Q9H7P9 1386 aa16.59■□□□□ 0.25
LINC00563-201ENST00000566370 ANKRD24Q8TF21 1146 aa16.59■□□□□ 0.25
LINC00563-201ENST00000566370 HDAC5Q9UQL6 1122 aa16.59■□□□□ 0.25
LINC00563-201ENST00000566370 ABCC6O95255 1503 aa16.58■□□□□ 0.25
LINC00563-201ENST00000566370 CADPS2Q86UW7 1296 aa16.58■□□□□ 0.24
LINC00563-201ENST00000566370 MEIS3Q99687 375 aa16.58■□□□□ 0.24
LINC00563-201ENST00000566370 ALS2Q96Q42 1657 aa16.58■□□□□ 0.24
LINC00563-201ENST00000566370 NPHP3Q7Z494 1330 aa16.57■□□□□ 0.24
LINC00563-201ENST00000566370 RBM25P49756 843 aaKnown RBP16.57■□□□□ 0.24
LINC00563-201ENST00000566370 RGPD2P0DJD1 1756 aa16.56■□□□□ 0.24
LINC00563-201ENST00000566370 DEKP35659 375 aaKnown RBP16.56■□□□□ 0.24
LINC00563-201ENST00000566370 BTBD11A6QL63 1104 aa16.55■□□□□ 0.24
LINC00563-201ENST00000566370 NFKBIBQ15653 356 aa16.55■□□□□ 0.24
LINC00563-201ENST00000566370 TTC22Q5TAA0 569 aa16.55■□□□□ 0.24
LINC00563-201ENST00000566370 G2E3Q7L622 706 aa16.55■□□□□ 0.24
LINC00563-201ENST00000566370 TMEM94Q12767 1356 aa16.55■□□□□ 0.24
LINC00563-201ENST00000566370 XPCQ01831 940 aaPredicted RBP16.54■□□□□ 0.24
LINC00563-201ENST00000566370 RAPGEF4Q8WZA2 1011 aa16.54■□□□□ 0.24
LINC00563-201ENST00000566370 DNAJC5Q9H3Z4 198 aa16.54■□□□□ 0.24
LINC00563-201ENST00000566370 F6X3S4 739 aa16.53■□□□□ 0.24
LINC00563-201ENST00000566370 RNMTO43148 476 aaKnown RBP16.53■□□□□ 0.24
LINC00563-201ENST00000566370 UBTFL1P0CB47 393 aaPredicted RBP16.53■□□□□ 0.24
LINC00563-201ENST00000566370 EIF4A1P60842 406 aaKnown RBP16.53■□□□□ 0.24
LINC00563-201ENST00000566370 PLEKHM2Q8IWE5 1019 aa16.53■□□□□ 0.24
LINC00563-201ENST00000566370 LRRC59Q96AG4 307 aaKnown RBP16.53■□□□□ 0.24
LINC00563-201ENST00000566370 TBC1D2Q9BYX2 928 aa16.53■□□□□ 0.24
LINC00563-201ENST00000566370 SRCIN1Q9C0H9 1055 aa16.53■□□□□ 0.24
LINC00563-201ENST00000566370 SPG7Q9UQ90 795 aa16.53■□□□□ 0.24
LINC00563-201ENST00000566370 TATP17735 454 aaPredicted RBP16.52■□□□□ 0.23
LINC00563-201ENST00000566370 TBC1D9Q6ZT07 1266 aa16.52■□□□□ 0.23
LINC00563-201ENST00000566370 NECTIN2Q92692 538 aa16.52■□□□□ 0.23
LINC00563-201ENST00000566370 TNS3Q68CZ2 1445 aa16.52■□□□□ 0.23
LINC00563-201ENST00000566370 ATP8B2P98198 1209 aa16.51■□□□□ 0.23
LINC00563-201ENST00000566370 SNX21Q969T3 373 aa16.51■□□□□ 0.23
LINC00563-201ENST00000566370 DBF4Q9UBU7 674 aaPredicted RBP16.51■□□□□ 0.23
LINC00563-201ENST00000566370 ERBB3P21860 1342 aa16.5■□□□□ 0.23
LINC00563-201ENST00000566370 LRRCC1Q9C099 1032 aa16.5■□□□□ 0.23
LINC00563-201ENST00000566370 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.5■□□□□ 0.23
LINC00563-201ENST00000566370 EIF2S2P20042 333 aaKnown RBP16.49■□□□□ 0.23
LINC00563-201ENST00000566370 HSP90AB4PQ58FF6 505 aa16.49■□□□□ 0.23
LINC00563-201ENST00000566370 MPRIPQ6WCQ1 1025 aa16.49■□□□□ 0.23
LINC00563-201ENST00000566370 LGR6Q9HBX8 967 aa16.49■□□□□ 0.23
LINC00563-201ENST00000566370 RAB11FIP3O75154 756 aa16.48■□□□□ 0.23
LINC00563-201ENST00000566370 REC8O95072 547 aa16.48■□□□□ 0.23
LINC00563-201ENST00000566370 DDX58O95786 925 aaKnown RBP16.48■□□□□ 0.23
LINC00563-201ENST00000566370 CSB-PGBD3P0DP91 1061 aa16.48■□□□□ 0.23
LINC00563-201ENST00000566370 DNAAF4Q8WXU2 420 aa16.48■□□□□ 0.23
LINC00563-201ENST00000566370 SLKQ9H2G2 1235 aaPredicted RBP16.48■□□□□ 0.23
LINC00563-201ENST00000566370 OSBPL3Q9H4L5 887 aa16.48■□□□□ 0.23
LINC00563-201ENST00000566370 NLRP2Q9NX02 1062 aa16.48■□□□□ 0.23
LINC00563-201ENST00000566370 CHMP5Q9NZZ3 219 aa16.48■□□□□ 0.23
LINC00563-201ENST00000566370 ADAMTS7Q9UKP4 1686 aa16.48■□□□□ 0.23
LINC00563-201ENST00000566370 PLEKHG5O94827 1062 aa16.47■□□□□ 0.23
LINC00563-201ENST00000566370 HSP90AB1P08238 724 aaKnown RBP16.47■□□□□ 0.23
LINC00563-201ENST00000566370 HYPKQ9NX55 129 aa16.47■□□□□ 0.23
LINC00563-201ENST00000566370 SIPA1L3O60292 1781 aaPredicted RBP16.47■□□□□ 0.23
LINC00563-201ENST00000566370 RGPD5Q99666 1765 aa16.47■□□□□ 0.23
LINC00563-201ENST00000566370 APBB1O00213 710 aa16.46■□□□□ 0.23
LINC00563-201ENST00000566370 ZC3H6P61129 1189 aaKnown RBP16.46■□□□□ 0.23
LINC00563-201ENST00000566370 AOX1Q06278 1338 aa16.46■□□□□ 0.23
LINC00563-201ENST00000566370 PXDNQ92626 1479 aa16.46■□□□□ 0.23
LINC00563-201ENST00000566370 ALDH1L1O75891 902 aa16.45■□□□□ 0.22
LINC00563-201ENST00000566370 HSP90AA1P07900 732 aaKnown RBP16.45■□□□□ 0.22
LINC00563-201ENST00000566370 GSPT1P15170 499 aaKnown RBP16.45■□□□□ 0.22
LINC00563-201ENST00000566370 CHPF2Q9P2E5 772 aa16.45■□□□□ 0.22
LINC00563-201ENST00000566370 LRRFIP2Q9Y608 721 aaKnown RBP16.45■□□□□ 0.22
LINC00563-201ENST00000566370 STRCP1A6NGW2 1772 aa16.45■□□□□ 0.22
LINC00563-201ENST00000566370 RABEP1Q15276 862 aa16.45■□□□□ 0.22
LINC00563-201ENST00000566370 CIZ1Q9ULV3 898 aaPredicted RBP16.45■□□□□ 0.22
LINC00563-201ENST00000566370 IBTKQ9P2D0 1353 aaPredicted RBP16.44■□□□□ 0.22
LINC00563-201ENST00000566370 SCN11AQ9UI33 1791 aa16.44■□□□□ 0.22
LINC00563-201ENST00000566370 IFNL2Q8IZJ0 200 aa16.44■□□□□ 0.22
LINC00563-201ENST00000566370 BCL11AQ9H165 835 aa16.44■□□□□ 0.22
LINC00563-201ENST00000566370 PHAXQ9H814 394 aaKnown RBP16.44■□□□□ 0.22
LINC00563-201ENST00000566370 SMARCA5O60264 1052 aaPredicted RBP16.43■□□□□ 0.22
LINC00563-201ENST00000566370 CPDO75976 1380 aa16.43■□□□□ 0.22
LINC00563-201ENST00000566370 SDSP20132 328 aa16.43■□□□□ 0.22
LINC00563-201ENST00000566370 MX1P20591 662 aa16.43■□□□□ 0.22
LINC00563-201ENST00000566370 PTMSP20962 102 aa16.43■□□□□ 0.22
LINC00563-201ENST00000566370 MCCP23508 829 aa16.43■□□□□ 0.22
LINC00563-201ENST00000566370 PDE1AP54750 535 aa16.43■□□□□ 0.22
LINC00563-201ENST00000566370 SPATA31A3Q5VYP0 1347 aa16.43■□□□□ 0.22
LINC00563-201ENST00000566370 IL27Q8NEV9 243 aa16.43■□□□□ 0.22
LINC00563-201ENST00000566370 USP44Q9H0E7 712 aa16.43■□□□□ 0.22
LINC00563-201ENST00000566370 GIGYF1O75420 1035 aaPredicted RBP16.42■□□□□ 0.22
LINC00563-201ENST00000566370 GSE1Q14687 1217 aa16.42■□□□□ 0.22
LINC00563-201ENST00000566370 SSH3Q8TE77 659 aa16.42■□□□□ 0.22
LINC00563-201ENST00000566370 ANTXR1Q9H6X2 564 aa16.42■□□□□ 0.22
LINC00563-201ENST00000566370 EXOC6BQ9Y2D4 811 aa16.42■□□□□ 0.22
LINC00563-201ENST00000566370 AXIN2Q9Y2T1 843 aa16.42■□□□□ 0.22
LINC00563-201ENST00000566370 COL18A1P39060 1754 aa16.41■□□□□ 0.22
LINC00563-201ENST00000566370 HEG1Q9ULI3 1381 aa16.41■□□□□ 0.22
LINC00563-201ENST00000566370 PI4KAP2A4QPH2 592 aa16.41■□□□□ 0.22
LINC00563-201ENST00000566370 ERC2O15083 957 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms