RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 RRP7AQ9Y3A4 280 aaKnown RBP21.74■■□□□ 1.07
RAB40C-210ENST00000566290 DLG5Q8TDM6 1919 aa21.74■■□□□ 1.07
RAB40C-210ENST00000566290 MAP3K5Q99683 1374 aa21.74■■□□□ 1.07
RAB40C-210ENST00000566290 PPM1GO15355 546 aaPredicted RBP21.73■■□□□ 1.07
RAB40C-210ENST00000566290 ZNF428Q96B54 188 aa21.73■■□□□ 1.07
RAB40C-210ENST00000566290 RIPK4P57078 832 aa21.72■■□□□ 1.07
RAB40C-210ENST00000566290 CDCA7Q9BWT1 371 aaPredicted RBP21.72■■□□□ 1.07
RAB40C-210ENST00000566290 IGSF1Q8N6C5 1336 aa21.72■■□□□ 1.07
RAB40C-210ENST00000566290 AAMPQ13685 434 aa21.71■■□□□ 1.07
RAB40C-210ENST00000566290 PDE3AQ14432 1141 aa21.71■■□□□ 1.07
RAB40C-210ENST00000566290 FAM208AQ9UK61 1670 aaKnown RBP21.71■■□□□ 1.07
RAB40C-210ENST00000566290 BCL9O00512 1426 aa21.71■■□□□ 1.07
RAB40C-210ENST00000566290 SHANK3Q9BYB0 1731 aa21.7■■□□□ 1.06
RAB40C-210ENST00000566290 NBPF6Q5VWK0 638 aa21.7■■□□□ 1.06
RAB40C-210ENST00000566290 NBPF4Q96M43 638 aa21.7■■□□□ 1.06
RAB40C-210ENST00000566290 FANCIQ9NVI1 1328 aa21.7■■□□□ 1.06
RAB40C-210ENST00000566290 IL2RBP14784 551 aa21.69■■□□□ 1.06
RAB40C-210ENST00000566290 NEUROD2Q15784 382 aa21.69■■□□□ 1.06
RAB40C-210ENST00000566290 USHBP1Q8N6Y0 703 aa21.69■■□□□ 1.06
RAB40C-210ENST00000566290 NCAPD2Q15021 1401 aa21.69■■□□□ 1.06
RAB40C-210ENST00000566290 EXOC5O00471 708 aa21.68■■□□□ 1.06
RAB40C-210ENST00000566290 TNS2Q63HR2 1409 aa21.68■■□□□ 1.06
RAB40C-210ENST00000566290 GOLGB1Q14789 3259 aaKnown RBP21.67■■□□□ 1.06
RAB40C-210ENST00000566290 RARSP54136 660 aaKnown RBP21.67■■□□□ 1.06
RAB40C-210ENST00000566290 KLHL34Q8N239 644 aa21.67■■□□□ 1.06
RAB40C-210ENST00000566290 CCDC136Q96JN2 1154 aa21.67■■□□□ 1.06
RAB40C-210ENST00000566290 PLEKHG2Q9H7P9 1386 aa21.66■■□□□ 1.06
RAB40C-210ENST00000566290 EXOC6Q8TAG9 804 aa21.66■■□□□ 1.06
RAB40C-210ENST00000566290 IFT57Q9NWB7 429 aa21.66■■□□□ 1.06
RAB40C-210ENST00000566290 ZNF853P0CG23 659 aa21.65■■□□□ 1.06
RAB40C-210ENST00000566290 PHACTR3Q96KR7 559 aa21.65■■□□□ 1.06
RAB40C-210ENST00000566290 MEGF6O75095 1541 aa21.65■■□□□ 1.06
RAB40C-210ENST00000566290 HMOX1P09601 288 aa21.64■■□□□ 1.05
RAB40C-210ENST00000566290 BRPF1P55201 1214 aaPredicted RBP21.64■■□□□ 1.05
RAB40C-210ENST00000566290 GNAI1P63096 354 aa21.64■■□□□ 1.05
RAB40C-210ENST00000566290 ZNF827Q17R98 1081 aa21.64■■□□□ 1.05
RAB40C-210ENST00000566290 B4GALNT3Q6L9W6 998 aa21.63■■□□□ 1.05
RAB40C-210ENST00000566290 NLGN2Q8NFZ4 835 aa21.62■■□□□ 1.05
RAB40C-210ENST00000566290 MS4A1P11836 297 aa21.61■■□□□ 1.05
RAB40C-210ENST00000566290 ALDH1L2Q3SY69 923 aa21.61■■□□□ 1.05
RAB40C-210ENST00000566290 SULT6B1Q6IMI4 303 aa21.61■■□□□ 1.05
RAB40C-210ENST00000566290 ACSBG1Q96GR2 724 aa21.61■■□□□ 1.05
RAB40C-210ENST00000566290 HTATSF1O43719 755 aaKnown RBP21.6■■□□□ 1.05
RAB40C-210ENST00000566290 CRBNQ96SW2 442 aa21.6■■□□□ 1.05
RAB40C-210ENST00000566290 PAPPAQ13219 1627 aa21.59■■□□□ 1.05
RAB40C-210ENST00000566290 PLIN1O60240 522 aa21.59■■□□□ 1.05
RAB40C-210ENST00000566290 YBX3P16989 372 aaKnown RBP eCLIP21.59■■□□□ 1.05
RAB40C-210ENST00000566290 CFAP44Q96MT7 982 aa21.59■■□□□ 1.05
RAB40C-210ENST00000566290 BCAR3O75815 825 aa21.58■■□□□ 1.05
RAB40C-210ENST00000566290 DDX54Q8TDD1 881 aaKnown RBP21.58■■□□□ 1.05
RAB40C-210ENST00000566290 LRRC4BQ9NT99 713 aa21.58■■□□□ 1.05
RAB40C-210ENST00000566290 HSPA6P17066 643 aa21.57■■□□□ 1.04
RAB40C-210ENST00000566290 GAS2L2Q8NHY3 880 aa21.57■■□□□ 1.04
RAB40C-210ENST00000566290 EYA1Q99502 592 aa21.57■■□□□ 1.04
RAB40C-210ENST00000566290 KIF16BQ96L93 1317 aa21.56■■□□□ 1.04
RAB40C-210ENST00000566290 EXOSC9Q06265 439 aaKnown RBP21.56■■□□□ 1.04
RAB40C-210ENST00000566290 AEBP1Q8IUX7 1158 aa21.56■■□□□ 1.04
RAB40C-210ENST00000566290 ATP10DQ9P241 1426 aa21.55■■□□□ 1.04
RAB40C-210ENST00000566290 POLD1P28340 1107 aa21.55■■□□□ 1.04
RAB40C-210ENST00000566290 C20orf194Q5TEA3 1177 aa21.55■■□□□ 1.04
RAB40C-210ENST00000566290 ZCRB1Q8TBF4 217 aaKnown RBP21.55■■□□□ 1.04
RAB40C-210ENST00000566290 TSHZ2Q9NRE2 1034 aa21.55■■□□□ 1.04
RAB40C-210ENST00000566290 TSR2Q969E8 191 aaKnown RBP21.54■■□□□ 1.04
RAB40C-210ENST00000566290 AKT1S1Q96B36 256 aa21.54■■□□□ 1.04
RAB40C-210ENST00000566290 GRIN3BO60391 1043 aa21.53■■□□□ 1.04
RAB40C-210ENST00000566290 SLC16A10Q8TF71 515 aa21.53■■□□□ 1.04
RAB40C-210ENST00000566290 RAPGEF4Q8WZA2 1011 aa21.53■■□□□ 1.04
RAB40C-210ENST00000566290 NHSQ6T4R5 1651 aa21.53■■□□□ 1.04
RAB40C-210ENST00000566290 TATP17735 454 aaPredicted RBP21.52■■□□□ 1.04
RAB40C-210ENST00000566290 BABAM1Q9NWV8 329 aa21.52■■□□□ 1.04
RAB40C-210ENST00000566290 KDM2BQ8NHM5 1336 aa21.52■■□□□ 1.03
RAB40C-210ENST00000566290 COL24A1Q17RW2 1714 aa21.51■■□□□ 1.03
RAB40C-210ENST00000566290 PNPLA7Q6ZV29 1317 aa21.51■■□□□ 1.03
RAB40C-210ENST00000566290 KAT6BQ8WYB5 2073 aa21.51■■□□□ 1.03
RAB40C-210ENST00000566290 ZKSCAN2Q63HK3 967 aa21.5■■□□□ 1.03
RAB40C-210ENST00000566290 GPBP1L1Q9HC44 474 aaPredicted RBP21.5■■□□□ 1.03
RAB40C-210ENST00000566290 SOS1Q07889 1333 aaPredicted RBP21.5■■□□□ 1.03
RAB40C-210ENST00000566290 CHL1O00533 1208 aa21.49■■□□□ 1.03
RAB40C-210ENST00000566290 CENPQQ7L2Z9 268 aaPredicted RBP21.49■■□□□ 1.03
RAB40C-210ENST00000566290 ARHGAP45Q92619 1136 aa21.49■■□□□ 1.03
RAB40C-210ENST00000566290 BTAF1O14981 1849 aa21.48■■□□□ 1.03
RAB40C-210ENST00000566290 ADAMTS7Q9UKP4 1686 aa21.48■■□□□ 1.03
RAB40C-210ENST00000566290 CANXP27824 592 aaKnown RBP21.48■■□□□ 1.03
RAB40C-210ENST00000566290 MBIPQ9NS73 344 aa21.48■■□□□ 1.03
RAB40C-210ENST00000566290 IPO8O15397 1037 aaKnown RBP21.47■■□□□ 1.03
RAB40C-210ENST00000566290 CYP27B1O15528 508 aa21.47■■□□□ 1.03
RAB40C-210ENST00000566290 ZNF526Q8TF50 670 aaPredicted RBP21.47■■□□□ 1.03
RAB40C-210ENST00000566290 SSH1Q8WYL5 1049 aa21.47■■□□□ 1.03
RAB40C-210ENST00000566290 PKD1L3Q7Z443 1732 aa21.46■■□□□ 1.03
RAB40C-210ENST00000566290 DOT1LQ8TEK3 1739 aa21.46■■□□□ 1.03
RAB40C-210ENST00000566290 MTHFSDQ2M296 383 aaKnown RBP21.46■■□□□ 1.03
RAB40C-210ENST00000566290 SMC4Q9NTJ3 1288 aa21.46■■□□□ 1.03
RAB40C-210ENST00000566290 VAMP4O75379 141 aa21.45■■□□□ 1.02
RAB40C-210ENST00000566290 PRIM1P49642 420 aaKnown RBP21.45■■□□□ 1.02
RAB40C-210ENST00000566290 KCNQ4P56696 695 aa21.45■■□□□ 1.02
RAB40C-210ENST00000566290 ATF7IPQ6VMQ6 1270 aa21.44■■□□□ 1.02
RAB40C-210ENST00000566290 CLUAP1Q96AJ1 413 aa21.44■■□□□ 1.02
RAB40C-210ENST00000566290 QSER1Q2KHR3 1735 aa21.43■■□□□ 1.02
RAB40C-210ENST00000566290 DZIP1LQ8IYY4 767 aaKnown RBP21.43■■□□□ 1.02
RAB40C-210ENST00000566290 TFCP2L1Q9NZI6 479 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms