RNA–Protein interactions for RNA: ENST00000566249.5

KARS-206, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-206ENST00000566249 CLN3Q13286 438 aa10.48□□□□□ -0.73
KARS-206ENST00000566249 C6orf118Q5T5N4 469 aa10.48□□□□□ -0.73
KARS-206ENST00000566249 MRPL14Q6P1L8 145 aaKnown RBP10.48□□□□□ -0.73
KARS-206ENST00000566249 XAGE2Q96GT9 111 aa10.48□□□□□ -0.73
KARS-206ENST00000566249 NLRP3Q96P20 1036 aa10.48□□□□□ -0.73
KARS-206ENST00000566249 M0R2N6 131 aa10.47□□□□□ -0.73
KARS-206ENST00000566249 BMP2P12643 396 aa10.47□□□□□ -0.73
KARS-206ENST00000566249 BMP1P13497 986 aa10.47□□□□□ -0.73
KARS-206ENST00000566249 CRIPAKQ8N1N5 446 aa10.47□□□□□ -0.73
KARS-206ENST00000566249 TSEN2Q8NCE0 465 aaKnown RBP10.47□□□□□ -0.73
KARS-206ENST00000566249 ESYT1Q9BSJ8 1104 aa10.47□□□□□ -0.73
KARS-206ENST00000566249 ST8SIA5O15466 376 aa10.46□□□□□ -0.73
KARS-206ENST00000566249 PDIA4P13667 645 aaKnown RBP10.46□□□□□ -0.73
KARS-206ENST00000566249 FAM69CQ0P6D2 419 aa10.46□□□□□ -0.73
KARS-206ENST00000566249 INSM2Q96T92 566 aaPredicted RBP10.46□□□□□ -0.73
KARS-206ENST00000566249 HINFPQ9BQA5 517 aa10.46□□□□□ -0.73
KARS-206ENST00000566249 SPINT1O43278 529 aa10.45□□□□□ -0.74
KARS-206ENST00000566249 LGR5O75473 907 aa10.45□□□□□ -0.74
KARS-206ENST00000566249 SCARF1Q14162 830 aa10.45□□□□□ -0.74
KARS-206ENST00000566249 TLR1Q15399 786 aa10.45□□□□□ -0.74
KARS-206ENST00000566249 SWI5Q1ZZU3 235 aa10.45□□□□□ -0.74
KARS-206ENST00000566249 TRIM46Q7Z4K8 759 aa10.45□□□□□ -0.74
KARS-206ENST00000566249 SLC4A9Q96Q91 983 aa10.45□□□□□ -0.74
KARS-206ENST00000566249 PURBQ96QR8 312 aaKnown RBP10.45□□□□□ -0.74
KARS-206ENST00000566249 AAASQ9NRG9 546 aa10.45□□□□□ -0.74
KARS-206ENST00000566249 SMTNP53814 917 aa10.44□□□□□ -0.74
KARS-206ENST00000566249 TNS4Q8IZW8 715 aa10.44□□□□□ -0.74
KARS-206ENST00000566249 POLMQ9NP87 494 aaPredicted RBP10.44□□□□□ -0.74
KARS-206ENST00000566249 HRH3Q9Y5N1 445 aa10.44□□□□□ -0.74
KARS-206ENST00000566249 CENPCQ03188 943 aa10.43□□□□□ -0.74
KARS-206ENST00000566249 CLP1Q92989 425 aaKnown RBP10.43□□□□□ -0.74
KARS-206ENST00000566249 A6NJY4 79 aa10.42□□□□□ -0.74
KARS-206ENST00000566249 CTSOP43234 321 aaPredicted RBP10.42□□□□□ -0.74
KARS-206ENST00000566249 TRAIPQ9BWF2 469 aa10.42□□□□□ -0.74
KARS-206ENST00000566249 PRMT3O60678 531 aa10.41□□□□□ -0.74
KARS-206ENST00000566249 EPHA4P54764 986 aa10.41□□□□□ -0.74
KARS-206ENST00000566249 MTFR1Q15390 333 aa10.41□□□□□ -0.74
KARS-206ENST00000566249 FHDC1Q9C0D6 1143 aaPredicted RBP10.41□□□□□ -0.74
KARS-206ENST00000566249 SLAIN2Q9P270 581 aa10.41□□□□□ -0.74
KARS-206ENST00000566249 GPC1P35052 558 aa10.4□□□□□ -0.74
KARS-206ENST00000566249 SLC27A3Q5K4L6 730 aa10.4□□□□□ -0.74
KARS-206ENST00000566249 FOXD4L5Q5VV16 416 aaPredicted RBP10.4□□□□□ -0.74
KARS-206ENST00000566249 Q6ZNB5 142 aa10.4□□□□□ -0.74
KARS-206ENST00000566249 PRIMPOLQ96LW4 560 aa10.4□□□□□ -0.74
KARS-206ENST00000566249 ZFP42Q96MM3 310 aa10.4□□□□□ -0.74
KARS-206ENST00000566249 ATP13A2Q9NQ11 1180 aa10.4□□□□□ -0.74
KARS-206ENST00000566249 DACH1Q9UI36 760 aa10.4□□□□□ -0.74
KARS-206ENST00000566249 RNF144AP50876 292 aaPredicted RBP10.39□□□□□ -0.75
KARS-206ENST00000566249 TBCELQ5QJ74 424 aa10.39□□□□□ -0.75
KARS-206ENST00000566249 ZSCAN10Q96SZ4 725 aaPredicted RBP10.39□□□□□ -0.75
KARS-206ENST00000566249 TSPAN10Q9H1Z9 355 aaPredicted RBP10.39□□□□□ -0.75
KARS-206ENST00000566249 SCHIP1Q9P0W5 487 aaPredicted RBP10.39□□□□□ -0.75
KARS-206ENST00000566249 ATP2B4P23634 1241 aa10.38□□□□□ -0.75
KARS-206ENST00000566249 GTF2E1P29083 439 aaPredicted RBP10.38□□□□□ -0.75
KARS-206ENST00000566249 FOXK2Q01167 660 aa10.38□□□□□ -0.75
KARS-206ENST00000566249 SLC9A9Q8IVB4 645 aa10.38□□□□□ -0.75
KARS-206ENST00000566249 GRIP2Q9C0E4 1043 aa10.38□□□□□ -0.75
KARS-206ENST00000566249 TTLL8A6PVC2 850 aa10.37□□□□□ -0.75
KARS-206ENST00000566249 CDK2AP1O14519 115 aa10.37□□□□□ -0.75
KARS-206ENST00000566249 TMEM214Q6NUQ4 689 aaKnown RBP10.37□□□□□ -0.75
KARS-206ENST00000566249 NBPF15Q8N660 670 aa10.37□□□□□ -0.75
KARS-206ENST00000566249 RNF217Q8TC41 542 aa10.37□□□□□ -0.75
KARS-206ENST00000566249 SCG3Q8WXD2 468 aaKnown RBP10.37□□□□□ -0.75
KARS-206ENST00000566249 USP3Q9Y6I4 520 aa10.37□□□□□ -0.75
KARS-206ENST00000566249 WEE1P30291 646 aa10.36□□□□□ -0.75
KARS-206ENST00000566249 OCLNQ16625 522 aa10.36□□□□□ -0.75
KARS-206ENST00000566249 GAS2L2Q8NHY3 880 aa10.36□□□□□ -0.75
KARS-206ENST00000566249 IQSEC3Q9UPP2 1182 aaPredicted RBP10.36□□□□□ -0.75
KARS-206ENST00000566249 ATAD2Q6PL18 1390 aa10.36□□□□□ -0.75
KARS-206ENST00000566249 SOS2Q07890 1332 aaPredicted RBP10.35□□□□□ -0.75
KARS-206ENST00000566249 FIGNL2A6NMB9 653 aa10.35□□□□□ -0.75
KARS-206ENST00000566249 IGFBP4P22692 258 aa10.35□□□□□ -0.75
KARS-206ENST00000566249 B4GALNT3Q6L9W6 998 aa10.35□□□□□ -0.75
KARS-206ENST00000566249 PPARGC1BQ86YN6 1023 aaKnown RBP10.35□□□□□ -0.75
KARS-206ENST00000566249 CHMP7Q8WUX9 453 aaPredicted RBP10.35□□□□□ -0.75
KARS-206ENST00000566249 CXXC1Q9P0U4 656 aaPredicted RBP10.35□□□□□ -0.75
KARS-206ENST00000566249 C21orf2O43822 256 aa10.34□□□□□ -0.75
KARS-206ENST00000566249 PPP1R12BO60237 982 aaPredicted RBP10.34□□□□□ -0.75
KARS-206ENST00000566249 SSFA2P28290 1259 aa10.34□□□□□ -0.75
KARS-206ENST00000566249 GNASQ5JWF2 1037 aa10.34□□□□□ -0.75
KARS-206ENST00000566249 PRICKLE2Q7Z3G6 844 aa10.34□□□□□ -0.75
KARS-206ENST00000566249 BRD1O95696 1058 aa10.33□□□□□ -0.76
KARS-206ENST00000566249 LYSMD3Q7Z3D4 306 aa10.33□□□□□ -0.76
KARS-206ENST00000566249 CABP1Q9NZU7 370 aa10.33□□□□□ -0.76
KARS-206ENST00000566249 PSMA6P60900 246 aaKnown RBP10.32□□□□□ -0.76
KARS-206ENST00000566249 RHBDD1Q8TEB9 315 aa10.32□□□□□ -0.76
KARS-206ENST00000566249 NIFKQ9BYG3 293 aaKnown RBP10.32□□□□□ -0.76
KARS-206ENST00000566249 CHMP3Q9Y3E7 222 aa10.32□□□□□ -0.76
KARS-206ENST00000566249 POU4F2Q12837 409 aa10.31□□□□□ -0.76
KARS-206ENST00000566249 FKBP5Q13451 457 aaPredicted RBP10.31□□□□□ -0.76
KARS-206ENST00000566249 C4orf17Q53FE4 359 aa10.31□□□□□ -0.76
KARS-206ENST00000566249 PHLDB3Q6NSJ2 640 aa10.31□□□□□ -0.76
KARS-206ENST00000566249 AEBP1Q8IUX7 1158 aa10.31□□□□□ -0.76
KARS-206ENST00000566249 SENP2Q9HC62 589 aa10.31□□□□□ -0.76
KARS-206ENST00000566249 DNMT3LQ9UJW3 386 aa10.31□□□□□ -0.76
KARS-206ENST00000566249 SPATA31C2B4DYI2 1134 aa10.3□□□□□ -0.76
KARS-206ENST00000566249 LCE2BO14633 110 aa10.3□□□□□ -0.76
KARS-206ENST00000566249 FOXO3O43524 673 aa10.3□□□□□ -0.76
KARS-206ENST00000566249 MAN1A2O60476 641 aa10.3□□□□□ -0.76
KARS-206ENST00000566249 RHOQP17081 205 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms